Acipenser ruthenus (sterlet): 117411170
Help
Entry
117411170 CDS
T07327
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117411170
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117411170
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
117411170
Membrane trafficking [BR:
arut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117411170
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
117411170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
Vps4_C
AAA_5
TIP49
Mg_chelatase
AAA_14
AAA_16
IstB_IS21
nSTAND3
AAA_24
DUF815
AAA_2
MIT
Motif
Other DBs
NCBI-GeneID:
117411170
NCBI-ProteinID:
XP_033874297
LinkDB
All DBs
Position
6:complement(48670703..48712398)
Genome browser
AA seq
614 aa
AA seq
DB search
MSSPGGRGKKKKGSAGTTSSSPEVDAPDQVSLHKRNLYYFSYPLLAVFAVFRVLVLHLGI
LFAWFCERLSRVMAAKNRPLAAAAVGKESEDDCELVRNCHKQAFEYISVALRIDENDKGH
KEQAVQWYKKGIAELEKGIAVQVTGQGEQYERARRLQAKMTTNLIMAKDRLELLVFYRNK
LWFEQNILSKTAKLRPDSGVSKPQSDIYKESINQPYYNGHLHSESGAVPKKKDPLTHSSH
SLPRSKNVLKNTSAGLPSHHRSPSYSGPSSNTSRSPAQPFSASKGPVAKTVNRPNNKPPT
PTAVPRRKKDLKNLKNVDSKLANLILNEIVDSGASVRFDDVAGQDLAKQALQEIVILPAL
RPELFTGLRAPARGLLLFGPPGNGKTMLAKAVALESNATFFNISAASLTSKYVGEGEKLV
RALFAVARELQPSIIFIDEIDSLLCERREGEHDASRRLKTEFLIEFDGVQSIGDDRVLVM
GATNRPQELDEAVLRRFAKRVYVALPSEETRLKLMKNLLGKHGNPLSQKELVQLARMTEG
YSGSDLTALAKDAALGPIRELKPEQVKSMSANEMRNIKFCDFVESLKKIKHSVSPQTLDA
FVRWNKDYGDTTTI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggcggaagagggaaaaagaagaaaggctcagccggtactaccagctcc
tcgccagaagtggacgcccccgatcaggtgtcgctgcataagcggaatctgtactacttt
tcgtacccgctgctggcggtgttcgccgttttccgagtcctcgtcctgcacttgggcatt
ctgttcgcctggttctgcgaacggttgtcccgggtcatggcggctaaaaacaggccactt
gcagcagcggctgttggcaaagaatccgaggatgactgcgagctagttcggaactgccat
aagcaggcttttgagtacatctctgtcgccctgaggatcgatgaaaacgacaaagggcat
aaagaacaagctgttcaatggtacaagaaaggcattgcagaactggagaagggaattgct
gtacaagttactggacaaggtgagcagtacgaacgagctagaaggctgcaagctaagatg
accaccaatttgataatggcaaaggatcgtttagaacttctagttttctacaggaataaa
ttgtggtttgagcagaacattctatctaaaacagcaaagctgcgaccagattctggtgtt
tctaagcctcagagtgacatctataaagagagtataaaccagccctactataatggacac
ctccattcagaaagtggagctgttcccaaaaagaaggatcctttaacccactccagccac
tcactcccacgatcaaaaaatgtactaaaaaatacatctgcaggacttcctagtcatcat
cgctcgcccagctacagtggcccatcctcaaacacttccaggtcaccagcacagcctttc
agtgctagcaagggccccgtagcaaaaacagtcaacagaccaaacaacaaacctccaact
ccaacggctgttcctcgtagaaagaaggatttgaagaacttaaagaatgtggatagcaag
ctagccaacctgatcctcaatgaaatcgtggatagtggagcatctgtcagatttgatgac
gttgcaggacaggaccttgccaagcaggcacttcaggaaattgtgatacttcctgctctt
agaccagaattgtttacaggcctccgggctcctgctcgtggattactgctcttcggtcct
ccaggaaacggaaaaaccatgctggccaaagctgtggccttggaatccaatgctacattt
tttaatataagtgctgccagcttgacttccaaatatgtgggagaaggagaaaagctagtg
agagcactctttgcagtagctagggagcttcagccctccattattttcatcgatgaaatc
gatagccttttgtgtgagagaagagaaggtgaacacgacgcaagtcgacgattaaaaact
gaatttttaatagaattcgacggggttcaatctattggagatgacagggttttggtaatg
ggagcaactaatagacctcaggaactggatgaggcagtacttaggcggtttgcaaaaagg
gtgtatgtggctttgccaagtgaagagacacggttgaagcttatgaaaaacctccttggt
aaacacggaaacccactaagccaaaaggaactggtacaattagccagaatgacagaaggt
tattcagggagcgacctgactgcattagcaaaagatgctgctttgggtcctattagagaa
ctcaaaccagaacaagttaagagcatgtctgctaatgagatgagaaatataaagttctgt
gattttgtggaatccctgaagaaaataaaacacagtgtcagcccgcagactttggatgct
tttgtccgatggaataaggattatggagacaccacaacgatctga
DBGET
integrated database retrieval system
