Acipenser ruthenus (sterlet): 117411381
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Entry
117411381 CDS
T07327
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117411381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117411381
Spliceosome [BR:
arut03041
]
Complex A
U1 snRNP components
U1 related factors
117411381
Complex B
117411381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DTW
DUF4936
Motif
Other DBs
NCBI-GeneID:
117411381
NCBI-ProteinID:
XP_033874692
LinkDB
All DBs
Position
10:40686536..40709637
Genome browser
AA seq
904 aa
AA seq
DB search
MMGPPGMPPHFPPMGMPPMGQRPPNMSPMPPGMMPPMMPPMGGPMGQMPGMMPPMMPGMM
MPPHMPAAPMQPTGPPGVNISDATVASSVPGTLASNPAVSAVLQGASASSSPQDDQPKKS
LWTEHKSPDGRTYFYNTETKQSSWEKPDELKSPAEQMLSKCPWKEFKSDTGKPYYYNSQT
KESRWTKPKELEDLEAMIKAEENGASDVSAASVPASVAVPDITHASAAETEATVPVVGEE
QPVQTPVQAQEEPTEATLNSVEEAPNQEVPVNFFASDAVKKEERPELVKKVYKWNTKEEA
KQAFKELLKEKGVSSNASWEQAMKMIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEA
RIKYKEAKETYQRYLENHEKMTSTTRYKKAEQMFGEMEVWTAVPERDRLEIYEDVLFYLA
KKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLDNPTFAEDEELQNMDKED
ALICFEEHIRALEKEEEEEKQKSLLRERRRHRKNRESFQKFLDELHDHGQLHSMSAWMEM
YPTVSSNIRFANMLGQPVFGVYSVGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGFT
VEVNTTFEDFGTVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEETRKMKRKEAA
FKSMLKQAAPPLEHDSTWDSVRDRFLKESAFEDITLESERKRIFKDFVHVLEHECQHHHS
KNKKHSKKSKKHHRKRSRSRSGSDSEDDDYHSKKKKRSPSRSASERSSSAETEHSYKKSK
KHKKKGKKRRHKSASPESDADKDRKVRDRDRDREREREREREREKEKEKERDRDRDRDRE
REREKEKEKESEKSRGKSRAESKQKSPKRKREKEEGGWDTSGSELSEGELEKRRRTLLEQ
LDAP
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaccacctgggatgccacctcattttcctccaatggggatgccacccatgggt
cagagacctccaaacatgtccccaatgcctcctggtatgatgccaccaatgatgcctcct
atgggaggaccaatgggacagatgccaggcatgatgccgccaatgatgccaggaatgatg
atgccgcctcatatgccagctgctccaatgcaacctacaggaccgcctggtgtaaacatt
tcagatgctaccgtagcttcatcagtgcctggaactttggcctcaaatcctgcagtttct
gcagttctacaaggtgcctcggccagcagctcaccacaagacgaccaaccaaagaaatct
ttgtggactgagcacaagtctcctgatggaaggacatacttctacaatacagaaactaaa
cagtcctcttgggaaaagccagatgaacttaaatcacctgctgagcaaatgttgtcaaag
tgtccttggaaagaattcaagtcagatacaggaaagccttattattataactctcaaaca
aaggagtctcgctggacaaaacctaaagagctcgaggatcttgaagctatgatcaaggct
gaagaaaatggggcttcagatgtttcagcagcctccgtgcctgcttcagtagctgttcca
gacatcactcatgcatctgctgcagagactgaggccacagtcccagttgtcggtgaagaa
caaccagtccaaactcctgtccaggcacaagaggaacccacagaagccactttgaattca
gtcgaggaggctcctaatcaagaggttccagtgaatttttttgccagtgatgctgttaaa
aaggaagagaggccggaactagtcaagaaagtatacaagtggaacactaaagaagaagcc
aaacaagcattcaaagaactgttaaaagaaaagggtgtttcatccaatgcctcttgggaa
caagctatgaaaatgattatcaatgaccctagatatagtgcattgcctaagctgagtgag
aagaaacaagccttcaatgcttacaaggtacagactgaaaaagaagaaaaggaagaagct
agaattaaatacaaggaggccaaagaaacatatcagagatatctggaaaatcatgagaaa
atgacatcaactacaagatacaagaaagctgaacagatgtttggcgagatggaggtatgg
acagcagttcctgagcgtgatagattggaaatctatgaagatgtcttgttttaccttgca
aaaaaagaaaaggaacaagccaaacagctgagaaaaagaaattgggaagccctgaagaac
attttggataacatggctaatgtaacgtacaggacaacctggtcagaggcacagcagtat
cttctggacaaccctacatttgcagaggatgaagaattgcagaatatggataaggaggat
gcattaatttgctttgaagaacatataagagccttggagaaggaagaggaggaagaaaaa
caaaaatctttactaagggaaagaaggaggcatcgtaaaaacagagagtcgtttcaaaaa
tttttggatgagttacatgatcatggacaactacattcaatgtctgcatggatggaaatg
tatcctacggttagctccaacataagatttgccaacatgctgggacaacctgtttttggt
gtgtattctgtaggttcgacacctctggatctttttaagttttacgttgaagatttgaag
gcccgatatcatgatgaaaaaagaatcatcaaagacattcttaaggacaaaggatttaca
gttgaagtcaatactacttttgaagactttgggactgttatcagctctgataaaagagcc
acaactttggatgctggaaacatcaaacttgccttcaacagtttgttggagaaagcagaa
gctcgagagcgggaaagggaaaaagaagaaacccgaaagatgaagaggaaggaagctgcc
tttaaaagcatgttaaagcaggctgctcccccactcgaacatgattcgacatgggatagt
gttcgagatagattcctgaaagaatctgcctttgaagacattacattagaatctgaaaga
aaaaggatattcaaggacttcgtacatgttctagagcatgagtgtcaacatcatcattca
aagaacaagaagcactccaaaaagtcaaaaaagcaccacagaaagcgatcccgctctcgt
tcgggctcagattcagaggacgacgactaccattccaagaaaaagaaacgatcgccatct
agatctgcatctgagcgttcttctagtgcagaaacagagcacagttataagaaatctaaa
aagcacaagaaaaagggcaaaaagaggagacacaagtctgcatccccagaatccgatgct
gacaaggacaggaaagtgcgggatcgtgacagagaccgggagagggagagggagagggag
agggagagggagaaggagaaggagaaggagagagacagagacagggacagggacagggag
agggagagggaaaaggagaaggagaaggagagtgagaaatccagaggcaagtcccgagct
gaatccaagcaaaaatctccaaaaagaaaaagggagaaggaagaaggtggatgggacaca
tcaggcagtgagttgagtgaaggagaactagaaaaacgaaggagaactcttctggaacaa
ctggatgcaccataa
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