Acipenser ruthenus (sterlet): 117411427
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Entry
117411427 CDS
T07327
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117411427
Membrane trafficking [BR:
arut04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117411427
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117411427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_Vps41
Synaptobrevin
WD40_like
Motif
Other DBs
NCBI-GeneID:
117411427
NCBI-ProteinID:
XP_033874846
LinkDB
All DBs
Position
6:complement(18446361..18614243)
Genome browser
AA seq
1162 aa
AA seq
DB search
MKKFNIRKVLDGLSSVSSSSSSQPGNRDNDIQETLQSEHFQLCKTVRHGFPYQPSAMAFD
PVQKILAIGTQNGSLRLFGRPGVECYCQHDNGAAVIQLQFLINEGALVSALADDSIHLWN
LRQKRPAILHSLKFNRERITFCHLPFQSKWFYVGTERGNIHIVNVESFTLSGYVIMWNKA
IELSSKAHPGPVVHISDNPIDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEAIHSVAWH
HEGKQFICSHSDGSLTIWNVRSPAKSAQIITPHGKQPKDGKKPEPCKPILKVEYKTTRAG
DPFMVLSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDVQEPYAVV
VLLEKDLVVIDLAQNGYPIFENPYPLSIHESPVTCCEYFADCPVDLIPALYSVGSRQKRQ
GYSKKEWPISGGNWGLGSQSYPEIIITGHADGSVKFWDASAMMLQVLYKLKTAKVFDKSR
NKDDKPNTDIVDEDPFAIQILSWCPESRMLCVAGVSAHVIIYKFSKQEGATEVVQLLEVR
LQYELNDVESPEGDQVPSLPTPGATSSSQPPAPQSQPSTSSSSSDGIRDNVPCLKVRSTP
LKQSAGYQVELVIQLVWVSGEPPQQITSLGVNSSCGLVVFGNSNGLAIVDYLQKTVLLNR
GIIELYGSNDPYQRQPRSPRKTRQPSGAGLCDINEGSTTSEDRCKSPTSGSTSPCNSDDD
QKVPNFLERVKTKSRMFSKTIVYDLVVTTNHQHFYNGGGRGGAKMSRKLSLPTELKPDLD
IRDNSFSRSRSSSVTSIDKESQEAITSFQFCETFTRKTDSAAAPSLWVGTTLGTVLVFVL
NLPPAGEQRLLQPVIVLPSGTLIRLKGAILRMSFLDSTGALYPPACEPWREPNAPNDKDE
KDRLRKRRPVSVSPSASQEISENQYAVICSEKQAKVIALPSQNCIYKHNITETSFVLRAD
MVQMNNSICLACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFTNNGQALYLVS
PTEMQRITYSQDMCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESV
AGKASRSLAQHIPGPGGIEGMKGAASGVVGDLARARIALDERGQKLGELDERTAAMMASA
ESFSKHAHDMMLKCKDKKWYQF
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgttggacggcctgtcgtcggtctcctcctcctct
tcttctcaacctggaaacagggacaatgacatccaggagaccctccaatctgaacacttc
cagctctgcaagacggtccgtcatggattcccctatcaaccttccgcaatggcttttgat
cctgtgcagaaaatcttggccattgggacccagaatggatctttgaggctctttggccgc
ccaggagtcgaatgctactgccagcatgacaacggagcagcggtgatccagctccagttc
ctgattaacgagggagcccttgtgagtgccttggcagatgacagcattcacctctggaac
ctgcggcaaaagcgacctgccattcttcattccctcaaattcaacagggagaggataaca
ttttgccatctgcctttccagagtaaatggttttatgttggcaccgaaagaggaaatatt
cacattgtcaatgtggagtccttcaccctctcaggctacgtcattatgtggaataaagcc
atcgaactgtcatccaaggcccacccagggccagtcgtccacataagtgataatccaata
gacgaaggaaagcttctcattgggtttgagtctggaacagtagttttatgggacctcaag
tcaaagaaagcagactaccgatacacatacgatgaggctatccactctgttgcctggcat
catgaaggaaaacagttcatatgcagccattcagatggcagtttgaccatatggaatgta
agatcccctgccaagtctgcacagataatcacgccacatggtaagcagccgaaggatgga
aaaaagccagaaccctgcaaacctatcctgaaagtagaatataaaacaaccagagctgga
gatccattcatggttctatcagggggcctgtcatacgatactgtaggaagaagaccatgt
ttaacagtaatgcatggaaagagcactgctgtactagaaatggattatcctattgttgat
tttctaacgctgtgcgaaacgccatatcctaatgatgttcaggaaccgtatgctgtagtg
gtccttctagaaaaggatttagtagttattgatcttgctcaaaatggttacccaatattt
gaaaacccttatcctctgagtatacatgaatcccctgttacttgctgtgaatactttgct
gactgccctgtggacctcattcctgcactttattctgttgggtcaaggcagaagcggcaa
ggatacagtaaaaaggaatggcctatcagtggtggtaactggggacttggctcacaaagc
tatccagaaataattatcactgggcatgcagatggatcagtaaaattctgggatgcctct
gcaatgatgctacaagtactgtacaagctgaagacagcgaaggtgttcgataaatctcgg
aacaaggatgataagcccaacacagatatagtagatgaggacccctttgccattcagatc
ctgtcctggtgcccagagagcaggatgttgtgtgttgctggagtctccgcccatgttatc
atctataaattcagcaaacaggaaggggcgacggaagttgtgcagctactagaagttcgg
ttacagtatgagctcaatgatgttgaatctccggagggcgaccaagtcccgtccctgccg
acccctggggctacttccagctcccagccaccggcacctcagtcccagccctccaccagc
agcagctcttccgacggcattcgggacaacgtgccctgcctcaaagtacgaagcactcca
ctcaaacaatccgcaggctaccaggtggagctggttattcagctggtctgggttagcggg
gaacctccacaacaaataaccagccttggagttaactcatcctgtgggcttgtggttttt
ggaaatagtaatggccttgcaatcgtagactaccttcagaagactgttcttcttaaccgt
gggataatcgagttatatggatccaatgatccttatcaaagacagccaagatctcctcgc
aaaacacggcaaccgtctggagcaggtctttgtgatattaacgaaggatccacaacttca
gaagatagatgcaaatcgccaacttcaggttctacttcgccatgcaattctgatgatgac
caaaaagtgcctaattttctagaaagggtgaagaccaaaagcagaatgttttccaagacg
atagtctatgatctagtggtgacgactaaccatcaacatttctacaatggaggaggtaga
ggaggagcaaagatgtcacggaaattaagcttgcctactgagctaaagccagacttggat
atcagagacaactcgttcagtcgctcgcgcagctccagtgtaacgagcatcgacaaagag
tcccaggaggccatcacatcgttccagttctgtgagaccttcacacggaagaccgatagt
gccgcagctccaagcctgtgggtgggcactaccctgggcacggtgctggtttttgtcttg
aacctcccgcccgcaggagaacagagacttctccagcctgtcatcgttttgcccagtggt
acattgataagactgaaaggggctattttgaggatgtcatttctagactcaacaggagca
ttgtatcctccagcctgcgagccctggcgtgagcccaacgcccccaacgataaggatgaa
aaggacaggttaaggaaacgacggcctgtgtctgtttccccgtcagcctctcaggaaatc
agtgaaaaccagtatgcagtgatctgttcagaaaaacaagccaaggttatcgcactgcca
tcccagaactgcatatataaacacaatatcacagagacttcttttgttctccgggctgac
atggtgcaaatgaacaacagcatctgccttgcctgtttctgtgctaatggacatatcatg
actttaagtttgccaagtctaagaccgctgttggatgtaaattacctgcccctgaccgat
atgcggatagccagaactttctgctttaccaacaacggacaggctttatatctcgtctca
cccactgagatgcagcgaataacctacagccaagacatgtgtgagaatttacaggagatg
ttgggagagctgttcacaccagtagaaacgcctgaggcaccaaacagaggtttctttaaa
ggtctatttggaggtggcgcgcaatcactggacagagaagaactttttggtgaatcagtg
gctgggaaggcctctcggagtcttgcccaacatatccctggcccaggaggcatagaaggg
atgaagggagcagcgtctggggttgtgggggacctggcccgagcccggatagctctggat
gagagggggcagaaacttggagagctggatgagaggacagcagccatgatggccagtgct
gaatcattctcaaaacacgcacacgacatgatgctgaagtgcaaagataagaagtggtac
cagttctga
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integrated database retrieval system
