Acipenser ruthenus (sterlet): 117411507
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Entry
117411507 CDS
T07327
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117411507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117411507
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117411507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Utp12
WD40_CDC20-Fz
WD40_Prp19
WD40
ANAPC4_WD40
WD40_Gbeta
WDR55
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
EIF3I
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
SGL
Beta-prop_WDR75_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
117411507
NCBI-ProteinID:
XP_034777647
LinkDB
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Position
6:complement(59728596..59749108)
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AA seq
598 aa
AA seq
DB search
MAFDGPQRKKRKSEVVPHGDQLDLLALGTAVGTILLYSTVKGQLHSKLDGGHDSKVNCVR
WHPENNCLYSCSDDSRIVEWDLQTGKVKCKWKADKCAVSCLCLSPDGKMLLSAGQTIKMW
DLETKEVYRRFTGHATAVSTLCFISTRPPTHDMEGLYFLSGAAHDRLLSVWQVRSDGKDK
NAVLSFTLTDEPIYVDLAVSQSKDEAVKLAVVCKDGQMHLCEHVLNGHCKKPLSPSCSVQ
VASPGSVGDGVPRPVPILAAALTMDKQALLLAYGSGLQPVIERTTLNAGETHVCLVRDIQ
ASLTLRTETTFTKVKTPTVKADAKLLVPGLPGHSAPIKSTPVEMKRKPGSDTKEMSIEER
LSVIDLSPAEGRKGVHKGGLPLQTDSFAVLLVQGLESSDSNILNKVFQTRKEVLIKKTVA
RLPIPAVLPLVQELSKRMQGHPYSGVLMVRWLKAVFTFHASYLSTLPSLVSHLGVLYHMI
ESRVKMFHKLSRLHGKLYLLITQIAATDKSQSVAELDQTAKLVYEEDSSEDEAEGSGDEM
LAEEEDSDHWEEEEIKEVTERSNKEEGDGEEHSDEEMNIENKLNGDSDLEPDNESEEE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgacggccctcagcggaagaaaaggaaatcagaggtggttccgcacggcgac
cagctggacctgctggcactgggcactgcggtgggcaccatcctgctgtacagcacagtt
aagggacagctacatagcaagctggatggtggtcacgacagtaaagtgaactgtgtccgg
tggcatccggagaacaactgtctatacagctgctctgacgactctcgcatagtggagtgg
gacctacagactggcaaagtgaaatgcaagtggaaggcagacaagtgtgcggtgagctgc
ctgtgcctcagtcctgacgggaagatgctgctttccgctgggcagaccatcaagatgtgg
gacctggagaccaaggaggtgtaccggcggttcacaggtcacgccacagcagtgtccaca
ctctgcttcatcagcacgagacccccaactcacgatatggaggggctgtacttcctgtca
ggagctgcacacgaccgtctgctcagtgtctggcaggtgcggtcggacgggaaggataag
aacgccgtgctgtccttcaccctgacagacgaacccatctatgtggacctggctgtgtcc
cagagcaaagacgaggcagtgaagctggcggtggtgtgcaaggatggccagatgcacctc
tgtgagcatgtcctcaatggtcactgtaagaagcccctctccccctcgtgctcggtccag
gttgcctctcctggttcagttggtgacggtgtgcctcggccggtccctatcctggctgcc
gccctgactatggacaaacaggccctgctcctggcctacgggagcggcctgcagcctgtc
atcgaacgcaccactctgaatgctggtgagactcacgtgtgtctggtgagggatatccag
gcctcgctgacactccgcaccgagaccactttcaccaaggtgaagacgcccacagtcaaa
gctgatgccaagctcctggtgccaggacttcctgggcacagtgcacccatcaaatctacc
cctgtggaaatgaagaggaaaccgggttctgacaccaaggaaatgtccatagaggagcgc
ctgagtgtgattgatttatccccggcagaaggacgcaagggggtccacaaggggggtctc
cctctccagacagacagctttgcagtgctgctggtccagggcttggagagcagtgacagc
aacatcctcaacaaagtgtttcagacgagaaaggaggtgttgataaagaagactgttgcc
aggttaccaatccctgctgtgctgccattggtgcaggagctctcaaagagaatgcaaggc
catccatatagcggggtgctgatggtgcgatggttgaaagctgtcttcactttccatgcc
tcctatctctcaacgttgccgagcctggtgtcccatctgggagtgctgtatcacatgatc
gagagccgagtcaagatgtttcacaagctgtcccgtctccacgggaagctctacctgctc
atcacacagattgcagctactgacaagtcacagagtgtcgcagaattggaccagaccgcc
aaactcgtctacgaggaagattcttcagaagacgaagcggagggatcaggagatgagatg
ctggctgaggaggaagactctgatcactgggaggaagaggagatcaaggaagttacggag
cggtcaaacaaagaggagggggatggggaggagcacagtgacgaggagatgaacatagaa
aataaactcaacggagattcagacctggaaccagacaacgagagcgaggaggaatga
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