KEGG   Acipenser ruthenus (sterlet): 117411507
Entry
117411507         CDS       T07327                                 
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117411507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:arut03009]
    117411507
Ribosome biogenesis [BR:arut03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    117411507
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Utp12 WD40_CDC20-Fz WD40_Prp19 WD40 ANAPC4_WD40 WD40_Gbeta WDR55 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st EIF3I Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st SGL Beta-prop_WDR75_2nd NBCH_WD40
Other DBs
NCBI-GeneID: 117411507
NCBI-ProteinID: XP_034777647
LinkDB
Position
6:complement(59728596..59749108)
AA seq 598 aa
MAFDGPQRKKRKSEVVPHGDQLDLLALGTAVGTILLYSTVKGQLHSKLDGGHDSKVNCVR
WHPENNCLYSCSDDSRIVEWDLQTGKVKCKWKADKCAVSCLCLSPDGKMLLSAGQTIKMW
DLETKEVYRRFTGHATAVSTLCFISTRPPTHDMEGLYFLSGAAHDRLLSVWQVRSDGKDK
NAVLSFTLTDEPIYVDLAVSQSKDEAVKLAVVCKDGQMHLCEHVLNGHCKKPLSPSCSVQ
VASPGSVGDGVPRPVPILAAALTMDKQALLLAYGSGLQPVIERTTLNAGETHVCLVRDIQ
ASLTLRTETTFTKVKTPTVKADAKLLVPGLPGHSAPIKSTPVEMKRKPGSDTKEMSIEER
LSVIDLSPAEGRKGVHKGGLPLQTDSFAVLLVQGLESSDSNILNKVFQTRKEVLIKKTVA
RLPIPAVLPLVQELSKRMQGHPYSGVLMVRWLKAVFTFHASYLSTLPSLVSHLGVLYHMI
ESRVKMFHKLSRLHGKLYLLITQIAATDKSQSVAELDQTAKLVYEEDSSEDEAEGSGDEM
LAEEEDSDHWEEEEIKEVTERSNKEEGDGEEHSDEEMNIENKLNGDSDLEPDNESEEE
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggcgtttgacggccctcagcggaagaaaaggaaatcagaggtggttccgcacggcgac
cagctggacctgctggcactgggcactgcggtgggcaccatcctgctgtacagcacagtt
aagggacagctacatagcaagctggatggtggtcacgacagtaaagtgaactgtgtccgg
tggcatccggagaacaactgtctatacagctgctctgacgactctcgcatagtggagtgg
gacctacagactggcaaagtgaaatgcaagtggaaggcagacaagtgtgcggtgagctgc
ctgtgcctcagtcctgacgggaagatgctgctttccgctgggcagaccatcaagatgtgg
gacctggagaccaaggaggtgtaccggcggttcacaggtcacgccacagcagtgtccaca
ctctgcttcatcagcacgagacccccaactcacgatatggaggggctgtacttcctgtca
ggagctgcacacgaccgtctgctcagtgtctggcaggtgcggtcggacgggaaggataag
aacgccgtgctgtccttcaccctgacagacgaacccatctatgtggacctggctgtgtcc
cagagcaaagacgaggcagtgaagctggcggtggtgtgcaaggatggccagatgcacctc
tgtgagcatgtcctcaatggtcactgtaagaagcccctctccccctcgtgctcggtccag
gttgcctctcctggttcagttggtgacggtgtgcctcggccggtccctatcctggctgcc
gccctgactatggacaaacaggccctgctcctggcctacgggagcggcctgcagcctgtc
atcgaacgcaccactctgaatgctggtgagactcacgtgtgtctggtgagggatatccag
gcctcgctgacactccgcaccgagaccactttcaccaaggtgaagacgcccacagtcaaa
gctgatgccaagctcctggtgccaggacttcctgggcacagtgcacccatcaaatctacc
cctgtggaaatgaagaggaaaccgggttctgacaccaaggaaatgtccatagaggagcgc
ctgagtgtgattgatttatccccggcagaaggacgcaagggggtccacaaggggggtctc
cctctccagacagacagctttgcagtgctgctggtccagggcttggagagcagtgacagc
aacatcctcaacaaagtgtttcagacgagaaaggaggtgttgataaagaagactgttgcc
aggttaccaatccctgctgtgctgccattggtgcaggagctctcaaagagaatgcaaggc
catccatatagcggggtgctgatggtgcgatggttgaaagctgtcttcactttccatgcc
tcctatctctcaacgttgccgagcctggtgtcccatctgggagtgctgtatcacatgatc
gagagccgagtcaagatgtttcacaagctgtcccgtctccacgggaagctctacctgctc
atcacacagattgcagctactgacaagtcacagagtgtcgcagaattggaccagaccgcc
aaactcgtctacgaggaagattcttcagaagacgaagcggagggatcaggagatgagatg
ctggctgaggaggaagactctgatcactgggaggaagaggagatcaaggaagttacggag
cggtcaaacaaagaggagggggatggggaggagcacagtgacgaggagatgaacatagaa
aataaactcaacggagattcagacctggaaccagacaacgagagcgaggaggaatga

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