Acipenser ruthenus (sterlet): 117411557
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Entry
117411557 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 54-like
KO
K10653
tripartite motif-containing protein 54
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117411557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117411557
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117411557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_6
Sina_RING
PAH_ZNF598
Utp13
Motif
Other DBs
NCBI-GeneID:
117411557
NCBI-ProteinID:
XP_033875091
LinkDB
All DBs
Position
6:complement(72816642..72836429)
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AA seq
445 aa
AA seq
DB search
MTKEHLIQYRQMVPSTPVTHISGGINRIRNAQGPPPPTPPSYSLSDLNSGRSNSRLEREG
EEKGENRSREGKIVVLPVLLCTEEGMNFAVGYKRLLGDSNTMDNLEKQLICPICLEMFTK
PVVILPCQHNLCRKCANDVFQASNPLWLSRGSTTVSSGGRFRCPSCRHEVILDRHGVYGL
QRNLLVENIIDIYKQESSRPIHTKSEQQQLMCEEHGEEKINIYCLTCETPTCSMCKVFGA
HKDCEVAPLQNVYKRQKTELSDGIAMLVSGNDLIQAMISKLEEICKTIEDKGRQQKQHLC
RKFDALCSVLEERKKALLLCITQEQDEKLAHVRALSRQHGDHLEGAAKLVETCIQSMEEQ
QMAAFLQHAKELITKMTDTAKAKNMERTEPGYENMDHFIISTGDVSDMLRTIDFQQVSQG
DDNQEICEAEEEEEVAQQSTEAQVQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaacatctgatccagtacagacaaatggtcccctccacccctgtcactcac
atttcaggaggtataaatagaattaggaatgcacaaggcccccctccccccacccccccg
tcctattccctgtctgacctgaattctgggagaagcaacagcaggctagagagggagggg
gaggaaaagggagagaacagatcaagagaagggaagattgttgttttacctgttttgctg
tgcactgaagaggggatgaactttgcagtaggctataaacggttgctgggggactcgaac
accatggataacctggagaagcagctcatctgccccatctgcttggagatgttcaccaaa
cccgtggtgatcctgccctgccaacacaatctctgcaggaagtgtgccaatgacgtcttc
caggcttctaacccactgtggctgtcgcgaggctccacgactgtgtcctcaggggggcgt
ttccgttgcccttcctgccgacatgaagtgatcctggaccggcacggagtttacggactg
cagaggaacctgctggtggaaaacatcatagacatctacaaacaggagtcttccaggcct
atccacaccaagtcagagcagcagcagctgatgtgtgaggagcatggggaagagaagatt
aacatctactgcctgacctgcgagacgcccacctgctccatgtgcaaggtgttcggagct
cacaaagactgtgaagtagctcctctgcagaacgtttataaacggcaaaagactgaattg
agtgatggcattgctatgctggtatcggggaatgacctaatccaggctatgatctcaaaa
ctggaggaaatttgtaaaactattgaggacaaggggcggcagcagaagcagcacctttgt
aggaagtttgacgccctctgcagtgtgctggaggagaggaagaaggcgctcctgctgtgt
attacccaggagcaggatgagaagctggcccacgtcagggctctgagccggcagcacggg
gaccacctggagggagcagccaagctggtggagacgtgcatccagtccatggaggagcag
cagatggccgctttcctacagcatgctaaggaattgattacaaagatgacagacactgcc
aaagcaaagaacatggagaggactgagccagggtacgagaacatggatcatttcataatc
agcactggagatgttagcgacatgctgagaaccatagacttccaacaagtgtcacaggga
gatgacaatcaagagatatgtgaggctgaggaagaggaagaagtggcccagcaaagcaca
gaagcccaggtccagtga
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integrated database retrieval system
