Acipenser ruthenus (sterlet): 117412112
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Entry
117412112 CDS
T07327
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR-like isoform X1
KO
K05163
tumor necrosis factor receptor superfamily member 27
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117412112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
arut04050
]
117412112
Cytokine receptors [BR:
arut04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117412112
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Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
PROL5-SMR
Motif
Other DBs
NCBI-GeneID:
117412112
NCBI-ProteinID:
XP_033876004
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Position
21:25165673..25174717
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AA seq
405 aa
AA seq
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MDLSEHTISLLVWCVLCGSCSSCSDTQYRASDGSCKECQPCPAGEEPQEDCGIDSGWPVQ
CVPCEDGRYSADRGLNPCWSCTQCHVQNREELSPCQHTANAKCGRCLKGFFELKRTDGGS
ELVCIPCAGTDVTSRKECQVTEPPATSMAVIGMVSAASTFALVLLLWILVFITKQIRRGY
KGSLQPSRLPDPLTDLITQYSPKEVQPLRQEVTPKDLEQGCHCPDDSPRSLSSLIPEKET
PPHSIVINVTTNIKPPSEGEEQEWGEGPGDTALLQEEQMEHQLEEICRLAEGQSLEQLDY
DSVHELSLLVDSGGSRALRRLGWALGVRPDILNNLHGFQELFEYLRTSTYIQLPELARAA
ARIHRADLVDRLHQGLAATERAPRELGPAPSHSSLSSCTQTGAGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggacctctctgaacacacaatatccctgctggtgtggtgtgtgctctgcggctcctgc
tccagctgcagtgatacgcagtaccgcgcctctgacgggagctgtaaggagtgccagccg
tgtcccgcgggtgaagagccccaggaggactgcggaattgactctgggtggccggtacaa
tgcgtgccctgtgaggacggccggtacagcgctgaccggggcttgaacccgtgctggtcc
tgcacacagtgccacgttcagaaccgggaggagctctccccatgccagcacaccgccaac
gccaagtgtggccgctgtttaaaagggttctttgagctcaaacgcacagacggggggtcg
gagctggtctgcatcccctgtgccggcaccgacgtgacgagccgcaaggagtgccaagtg
acggaaccccctgcgacctccatggctgtgatcggcatggtctcagctgcctccaccttc
gcactggtgctgctgctctggatcctcgtgttcatcaccaagcagatcagacgagggtac
aagggctccctccagcccagcagactcccggaccctctgactgacctcatcactcagtac
tcgccaaaggaagtacagcctctccgacaggaagtgaccccgaaggacctggagcagggc
tgtcactgtccggatgactcccccagatcactgagctcgctgattccagagaaggagacc
ccaccccattcaattgtcatcaacgtcaccaccaatatcaagcccccctctgaaggggag
gagcaagagtggggggaggggccgggtgacaccgccctgttacaggaggagcagatggaa
caccagctggaggagatctgcagattagctgagggacagagcctggagcagctggactat
gacagtgtgcatgagctgtctctgctggtggactctggggggagccgggctctgcgcagg
ctgggctgggctctgggggtccggcctgacatcctcaataacctacacgggttccaggag
ctcttcgaatacctgcgcacctccacctacattcagctgccagagctggcccgcgccgct
gcacgcatccacagggcagacctggtcgacaggctgcaccagggcctggccgccacggag
agggcccccagggagctagggcccgccccctcccactcctccctctcctcctgcacacag
acaggtgctggtgtctaa
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