Acipenser ruthenus (sterlet): 117412161
Help
Entry
117412161 CDS
T07327
Name
(RefSeq) N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117412161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117412161
Enzymes [BR:
arut01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117412161
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117412161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-GeneID:
117412161
NCBI-ProteinID:
XP_034762344
LinkDB
All DBs
Position
25:complement(25657252..25661250)
Genome browser
AA seq
420 aa
AA seq
DB search
MSRHAVLSAGASLWRSISCPSAELRLDLVLNCGQSFRWRETSEGHWTGVIAGRVWTLTQT
QDRLWYWTYPSEPREERETETGADRVKTEPTGEGETQGVTNRREEKRGAERVNTEPTGEG
EGITSYTEKKRRRGRELIKTEPMGEGEGEGAREVKTEEVSPQGEGSEQDRKEQAILRDYF
QLSVSLGELYEQWSRADPHFKQVSETFTGVRILRQDPRECLFSFICTSNNHISRISGMVQ
RLCERLGEPLCQLDQTPYHQFPTLQALAAPGVEPLLRELGFGYRARFVTQSARQILEQQG
PDWLESLRDVTLEEARLALRKLPGVGAKVADCVCLMSLDKAESVPMDTHVWQIARRDYAS
QLGAGHKSLMDRVYHDIGDHFRKLWGPYAGWAHSVLFCADLKKFQNLKAEEQVKKKGRKR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacacgccgtgctgtcggccggagcctcgctgtggcgctcgatttcctgcccc
agcgcggagctgcgactcgacctggtgctcaactgcggccagtcattccggtggagagag
acgagcgagggacactggaccggggtgattgcgggccgcgtgtggactctgacccagaca
caggaccggctgtggtactggacctacccttcagaaccacgggaggagagggagacagag
acaggggcggaccgcgttaaaactgaacccacaggagaaggagagacgcagggagtgacc
aacaggagagaggagaagagaggggcggagcgcgtcaacactgaacccacaggagaggga
gagggaatcaccagttatacagaaaagaagagaaggagagggagggagcttatcaaaact
gagcccatgggagagggggagggggagggagcgagggaggtgaagacagaggaggtcagc
ccccagggtgagggttcagagcaggacaggaaggagcaggcgatcctgagggattacttc
cagctgagcgtgtctcttggggagctgtatgagcagtggagccgagctgacccacacttc
aaacaagtgagcgagactttcacaggagtgcggatcttgcgtcaggaccctcgcgagtgt
ctcttctccttcatctgcacttccaacaaccacatctcacgcatctcaggcatggtgcag
cggctgtgtgagagattgggggaacccctgtgccagctcgaccagaccccctaccaccag
ttcccaacactgcaggcactggcagccccgggagtggagcctctcctcagggagctgggt
ttcgggtacagggctcgctttgttacccagagcgccaggcagatcctggagcagcagggc
cctgattggctggagtccctgcgtgatgtcaccctcgaggaggcgcggttggctctgcgt
aagctgccgggggttggcgccaaggtagcggactgtgtgtgcctcatgtccctggacaag
gcggagtctgttcccatggatacgcacgtgtggcagatcgcccggcgggactacgcatca
cagctgggggcggggcacaagagcctgatggacagggtgtaccacgacatcggtgatcac
ttcagaaagctgtggggtccctatgcaggctgggcacactccgtgctattctgcgcagac
ttgaagaagttccagaacctcaaagcagaggaacaggtgaagaaaaaagggagaaaaaga
tag
DBGET
integrated database retrieval system
