Acipenser ruthenus (sterlet): 117412194
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Entry
117412194 CDS
T07327
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117412194 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117412194 (cstf2)
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117412194 (cstf2)
U7-dependent histone pre-mRNA processing factors
117412194 (cstf2)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
117412194
NCBI-ProteinID:
XP_034758950
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All DBs
Position
20:4197046..4206764
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AA seq
538 aa
AA seq
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MASLAAAVAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYD
RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTCAPV
IESPYGEPCNSEEAPESISRAVASLPPEQMFELMKQMKLCVQNSSQEARNMLLQNPQLAY
ALLQAQVVMRIVDPEIALKVLHRPTNIQPLIPSSQPGPGSVPNLPLNQPNPPASQPQQMV
GMHVNGAPQMMQPAQILGGVAVPGTLGPAGGMQQQIGIPQGGPVPMDRGQGSLQHSPVGP
AGQAQIERPQVPMPDPRAPMRGGPPVAAVPPRGLLGDGPNDPRGGTLLSVTGEVVEPSRG
GFMGAPPHQGPPMHLPHDGRGPPPDNRMAHDMRGGPMGEPRGMMGEPRGPMMDQRGPPME
ARGGRDPRGVEPRGLDPRGPVPAPRVPMPGGMQGPGPHNMGANVPQPARQPAPGLPVGAQ
PGGFSPAQSQVTPQDHEKAALIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKSAGAP
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtctagccgctgctgttgctgctgctgctgcggcggcgaacagggatcccgcc
gtggaccggtccctgcgatctgtgttcgtgggtaatattccatatgaagctacagaggag
cagttgaaggatattttctcagaagttgggctggtggtcagtttcaggttagtgtatgac
agggaaactggcaagcccaaggggtatggcttctgcgagtaccaggatcaggagactgcc
ctgagtgccatgcgcaacctgaacgggagagaattcagcgggcgagccctgcgtgtggac
aacgctgccagtgaaaagaacaaggaggagctcaagagtctgggcacctgtgccccggta
attgaatcaccgtacggagagccctgtaactctgaagaagcccccgagtcaatcagccgc
gctgtcgccagcctccccccagagcagatgtttgagctgatgaaacagatgaaactgtgt
gttcagaacagctcccaggaagcccggaacatgcttctccagaacccccagctggcgtac
gccttgctgcaggcacaggtggtcatgaggattgtggaccccgaaatcgcacttaaagtg
cttcaccggcccacgaacatccagcccctgattcccagcagccagccaggtccaggatct
gttccaaacctgcccctcaaccagcccaaccctccagcttctcagcctcagcaaatggtg
ggcatgcatgtgaacggagcccctcagatgatgcagcctgctcaaatcttgggaggggtg
gcggtgccaggcactctgggtccagcaggtggcatgcagcagcaaattggcattcctcaa
ggaggtcctgtaccaatggacagagggcaaggaagccttcagcactcgcctgtaggaccc
gcagggcaggcgcagatcgagcggcctcaagtgcccatgccagacccccgggccccaatg
agagggggtcccccagtggcagccgtgcctccccgaggcttgctgggagacgggccgaac
gacccccgagggggcaccctgctctccgttacaggggaggtggtggagcccagccggggg
gggttcatgggtgcaccacctcaccaggggccgccgatgcacctcccccacgatggacga
ggccccccaccagacaaccgcatggcacacgacatgaggggcggccccatgggagaaccc
aggggcatgatgggagagcccagaggaccaatgatggatcagcgagggccgccaatggag
gccaggggtggccgggatcccagaggggtcgagccccggggtcttgatcctaggggccct
gtccctgcacccagagtccccatgcctggtggaatgcagggtccggggccacacaacatg
ggagccaatgtgcctcagcctgccagacagccagcgcctggtctccctgtgggggcgcag
ccgggaggtttcagccctgcccagagtcaggtgaccccgcaggaccatgagaaggctgcc
ctgatcatgcaggtcctccagctgacccccgagcagatcgccatgctgcccccggagcag
agacagagcatcctcatcctgaaggagcagattcagaaatcagcgggagccccctga
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