KEGG   Acipenser ruthenus (sterlet): 117412222
Entry
117412222         CDS       T07327                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117412222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117412222
   03036 Chromosome and associated proteins [BR:arut03036]
    117412222
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     117412222
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     117412222
    COMPASS/SET1 complex (yeast)
     117412222
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_HPS5 KNTC1_N MinC_C
Other DBs
NCBI-GeneID: 117412222
NCBI-ProteinID: XP_033876269
LinkDB
Position
25:complement(26312322..26320739)
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKVDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFITGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEIVTLYDLRSFD
KGPFATFKMMPDRTCEWTGLKFSNDGKLILVSTNGGTLRLLDAFKGVVLHSFMGYNNSKG
VMLEASFTPDSQFIMIGSEDGKIHVWNAESGMKVAVLDGKHTGPVTCLQFNPKFMTFASG
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggataacgtgttgcggagttttcgcgtagccaaggttttcagggagaac
tcggataaaattaactgttttgatttcagctcgaacggagagacggtcatttccagcagc
gacgacgactccatcgtcttgtacgactgccaggagggaaagccgaagcggaccctgtac
agtaagaagtatggagtggacctgatcaggtacacgcatgcagccaacactgtggtctac
agctcaaacaaagtcgatgacaccattcggtatctgtcacttcatgataacaagtatatt
cgctacttcccgggacacagtaagagagtggtggccttgtccatgtctcctgtggatgac
acctttataaccggatccctggataaaaccatccgcctctgggacctgcgctccccaaac
tgtcagggtttgatgcacctgcaggggaagcctgtctgttcctttgaccccgagggactc
atcttcgcagccggtgtgaactctgagattgtgacgctgtatgacctgcggtcgttcgac
aagggtcccttcgctaccttcaagatgatgcccgacaggacgtgcgagtggaccgggctc
aagttcagcaacgacgggaagctgatcctggtctccaccaacgggggcaccctgcgactc
ctcgatgcattcaagggggttgtgctgcactccttcatgggctacaataacagtaaaggt
gtgatgttggaggcttcattcactccggactcccagtttatcatgatcggctccgaggac
gggaagatccacgtgtggaatgcggagagcggaatgaaggtggccgtgctggatgggaag
cacaccggccctgtcacctgtctgcagttcaaccccaaattcatgaccttcgccagcggc
tgctcaaacatggctttttggttgcccacaatcgatgactga

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