Acipenser ruthenus (sterlet): 117412249
Help
Entry
117412249 CDS
T07327
Name
(RefSeq) lysine-specific demethylase phf2-like isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117412249
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117412249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
JmjC_2
PHD_4
PHD_ash2p_like
RH_dom
Motif
Other DBs
NCBI-GeneID:
117412249
NCBI-ProteinID:
XP_034759743
LinkDB
All DBs
Position
21:3308891..3345860
Genome browser
AA seq
1090 aa
AA seq
DB search
MATVPVYCICRLPYDVSRFMIECDACKDWFHGSCVDVDEEEAPDIDIYHCPNCEKSHGKS
TLKKKRNWHKNDTGQSTEVKKPVLNGSQVFIKELRSRTFPSSEDVVVKLNGSQLTLDYIE
EKGFTEPILVPKKDGLGMSLPVPTFYVSDVENYVGPDRVVDVIDMSKQTECKMKLKEFVD
YYYSTNRKRVLNVISLEFSDTRMSSFVESPEIVRKLSWVENYWPDDALLGKPKVTQYCLI
CVKDSYTDFHIESGGASAWYHPLKGDKIFFLIKPTSANLSLYEHWRSSSNYSEMFFADQV
DKCYKCTLKQGQTLFIPSGWIYATLTPVDCLAFSGHFLHNLSVEMQMRAYEVEKRVKIGS
LTQFPNFETACWYVGRHLLERFKGLHKAGKQPLPHLVQGAKILNGAFRSWTKKQALLEHE
DELPENMKPSQLIKDLAKEIRITENACKAMKVELSASVPMEEPSAVELEEPEESEGPGQP
VSPMSSMSPVSPVHIPSPPQEKPSRKKAPKTPKTPKNPKTPKTPKTPKTPKMPKTPKTPK
TPKAVKNTKNPKTKEGGKKKGKKTKESSSSPTTPTLDVLEAHTKEALTKTETSKKGKAAK
NVLSMPEKEAISKQNELEKFEIREQNKSKTEAKWKYKNSKPDSLLKMEEEQKLEKTPLSG
NKDNKFAFSFSNKKLLSSKGLKPQMNSSVFGSLQNLKEDKVKPVRDEYEYVSDEGELKID
EFPIRRKNNTAKRDISFLSNIKEPIQQAKKPKLQRTPAKANDSSDEGSLHIDTETKTEVK
GRNSKVKKESGNAAGILDLLQASKQVGEIDYNANSPPPASPSTQEAIQGMLSMANLQSSD
SCLQTSWSNNQSKNNSHTTQSSKKAGNGNNKRPAKRPLKKSTKSSSVDSVEMFEDEQDHL
HACFKDSDYVYPSLESDEDNPIFKSRSKKRKSSDDTPYSPTARVGPSVPRQDRPVREGAR
VASIETGLAAAAAKLSQQEQQKTKKKKKNTKKKLSSDDANKIPQESSSPEPKLESHGSSL
ADHEYTAGAAKTPGAPQPMAPGVFLTQRRPSTSSQNSASAKAKRLKKGMATAKQRLGKIL
KIHRNGKLLL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtaccagtttattgcatctgtaggttaccttacgacgtatcccgcttcatg
atcgaatgcgatgcctgtaaggactggtttcacggcagctgtgttgatgtggatgaagag
gaagcgccagacattgacatctatcactgtccgaactgcgagaaatcccatggcaagtcc
actttgaaaaagaaaaggaattggcacaaaaatgacacggggcaaagtacagaggtgaag
aagcctgtcctgaacggcagccaggtgtttataaaggagctcagaagcaggacattccca
agttctgaagacgtggtggtaaagctgaatggaagccagctcacactagactatattgaa
gagaagggcttcacagaacccatcctggtcccaaagaaagatggactcggaatgtcatta
cccgtccccacgttctatgttagtgacgtagaaaactatgttggtccagacagagttgtg
gatgtcattgacatgtccaaacagacagagtgcaagatgaagctcaaggagtttgttgat
tattactacagcacaaacagaaaacgagtactgaacgtgataagcttggagttttctgac
acaagaatgtccagttttgtggagagccctgagattgtcagaaagctgtcctgggtggag
aattactggcctgacgacgcactccttggaaaacccaaagtcacccaatactgcctgatc
tgtgtgaaggacagctacacagacttccacatagaatcagggggagcctccgcatggtac
catccactcaaaggagataaaatattctttttaatcaaaccaacttctgcaaacctgtcc
ctttacgagcactggcgttcctcgtccaattacagtgagatgttttttgctgaccaagta
gacaagtgttacaagtgcactctgaaacaaggacagactttatttattccttcaggttgg
atttatgcaacgctgaccccagtggactgcctggctttttctgggcattttcttcataac
ctgagtgttgaaatgcagatgagagcatatgaagtggaaaaacgagtgaaaattggcagc
cttacccagtttcccaactttgaaactgcgtgctggtacgtgggcaggcatctgctggag
aggttcaaaggcttgcacaaagctgggaagcagccgctgcctcacttggtacaaggagcc
aaaatccttaatggggctttcaggtcgtggactaagaaacaggctcttcttgaacacgaa
gatgagcttccagaaaacatgaagccatcacagcttatcaaagaccttgccaaagaaatc
agaattacagagaatgcatgtaaagccatgaaggtggagctgagtgccagcgtacccatg
gaggagccttctgcagtggagctggaggaaccagaggagtcagaggggcctggtcagcct
gtgtcccccatgtcctccatgtcccctgtatcccccgtgcacatcccctcgccaccccaa
gagaaaccctcccgcaagaaggctcccaaaactcccaagacgcctaaaaaccccaagacc
cccaaaacgcccaagacccccaaaacgcccaagatgcccaagacccccaagacgcccaag
acccccaaggctgtgaaaaatacaaaaaaccccaaaacgaaagaggggggcaagaaaaaa
gggaagaaaacaaaagaaagctcctcttcccccaccacgccgaccctggacgtcctggaa
gcgcacacaaaagaggctctgacaaaaacagaaacgtcaaagaaagggaaggctgcaaag
aatgtgttgagcatgccagagaaagaggccatcagcaagcagaacgagctggagaagttt
gagatcagagagcagaacaagagcaaaacagaagctaaatggaaatacaagaacagtaaa
ccggattcattgctaaaaatggaggaagaacagaaattggaaaagacaccattatcagga
aacaaagacaacaaatttgcattttctttttcaaataaaaaattactaagttctaaaggg
ctaaagccacagatgaattcaagtgtatttggatcattacaaaacctgaaggaagataaa
gtgaagccagtcagggatgagtatgaatacgtgtcagatgaaggagaactgaaaattgac
gagtttccaataagaagaaaaaataacacagcaaaaagagatatttcttttttatcgaat
ataaaagagccgattcagcaggcaaaaaaaccaaagcttcaacgtacacccgccaaggct
aatgattcctcagatgaagggtcgcttcacattgacacagaaacaaagacagaagtcaaa
ggtcgaaattcaaaggtcaagaaggaaagtggtaatgctgcgggaatactggatctctta
caggccagcaagcaagttggagaaattgattacaatgcaaacagtccaccacctgcttct
cccagcacacaggaagccatccaggggatgctgtcaatggccaacctccagtcttcagac
tcctgtctacaaacctcttggtccaacaaccaatcaaaaaacaactcccatacgacgcag
tcatccaagaaggcaggcaacggcaacaacaagaggcccgccaagcgcccgctgaagaaa
agcacgaagagcagcagtgtggacagcgtggagatgtttgaggacgaacaggaccacctg
catgcgtgtttcaaagattcggattacgtatatccatctcttgagtcagatgaagacaac
cccattttcaaatccaggtcaaagaaaaggaaaagttcagatgatacaccttacagccca
acagccagagtaggtccatcagtcccccgacaagacagacctgttcgtgaaggagctcga
gtggcttcgatagaaaccggcctagcggctgcagcagccaaactctcccagcaggaacaa
caaaaaaccaagaagaagaagaaaaataccaaaaagaagctctcgtcagacgatgcaaat
aaaatccctcaggaaagcagttcaccggagcccaagctggagtcccatgggagcagtctg
gcggatcacgagtatacggctggggcagccaagacccctggcgcgccacaacccatggct
cctggagtgttcctcacacagaggaggccgtccacttcatctcagaacagcgcatcagcc
aaagccaaacggcttaagaaaggcatggctactgccaaacagagactggggaagattttg
aagattcatcgtaatgggaaacttctcctgtaa
DBGET
integrated database retrieval system
