Acipenser ruthenus (sterlet): 117412554
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Entry
117412554 CDS
T07327
Name
(RefSeq) probable global transcription activator SNF2L1 isoform X1
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117412554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117412554
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
117412554
CERF complex
117412554
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
117412554
NCBI-ProteinID:
XP_034759943
LinkDB
All DBs
Position
21:complement(26533475..26550598)
Genome browser
AA seq
1048 aa
AA seq
DB search
MSDEEVPSTSRDPEAEKDEKEDRPFQLSAPPKATSKVETEADPEYEEKRKADRTNRFEFL
LKQTELFAHFIQPAAQKTPTSPLKVKLGRPRVKKDEKQNLLSVGESLNYHGDVRKEEEAG
PEQSQLVAGLQLDSYRHRRTEQEEDEELLSESRRTANVCVRFEESPSYVKNGTLRDYQIR
GLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMS
EFKRWVPTLRAVCLIGDKDARAAFIRDVMVPGEWDVCVTSYEMVIREKSVFKKFNWRYLV
IDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSANDFD
SWFDTNNCLGDQKLVERLHAVLRPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTK
ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVTNGGKMV
VLDKLLPKMKEQGSRVLIFSQMTRVLDILEDYCMWRGHEYCRLDGQTHHEEREEAIETFN
APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKAVRVFR
LITDNTVEERIVERAEMKLRLDSIVIQQGRLIDQQSNKLAKDEMLQMIRHGATHVFTSKD
SELTDEDINSILERGAKKTAEMNERLEKLGESSLRNFTVDTETSLYNFEGEDYREKQKLS
LMEWIEPPKRERKANYAVDAYFREALRVSEPRAPKAPRPPKQPNIQDFQFFPPRLFELLE
KEILYYRKTIGYKVPRNSDLPNATQVQKEEQRKIDEAEPLTPEETEEKEKLLTQGFTSWN
KRDFNQFIKANEKYGRDDIDNIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIER
GEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDK
ENVYEELRQCVRNAPQFRFDWFIKSRTAMELQRRCNTLISLIEKENMEIEEKERAEKKKR
APKVAAAQKRKTDAPADSSVRKDKKMKS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgaagaggtcccgtccacgtctagggatcccgaagcagagaaggacgagaaa
gaggatcgtcctttccagctcagtgctcctcccaaggccaccagcaaggtagaaacagaa
gctgacccggagtatgaggagaagaggaaagcagatcgaaccaacaggtttgaattcctg
ttgaagcagacggagctctttgcacattttattcagcccgcagcacagaagacccccaca
tctcccctgaaagtcaagctgggacggccacgcgtcaagaaggacgagaaacaaaacctc
ctctccgttggagagtcccttaattaccatggtgatgtcagaaaggaagaggaggcagga
ccagaacagagtcaattagtggcaggattacagttggacagttatcgacatcggcgtaca
gaacaagaggaggatgaggagctgctgtccgagagcagaaggacggccaatgtctgtgtt
agatttgaagaatccccctcctatgtaaaaaatggaacattgagagactatcaaataaga
ggactaaactggatgatttctctatatgaaaatggcattaatggaattctggccgatgaa
atgggtctggggaagactctgcagaccattgcattactcggctatctcaagcactacaga
aacattcctggaccccacatggtcctggtccccaaatccacgctccacaactggatgagt
gagttcaaacgctgggtgccaacgctgcgagccgtctgcctcatcggagacaaggatgcc
agagctgccttcatccgtgacgtcatggtgccaggggagtgggatgtttgtgtcacctcg
tacgagatggtcatcagagaaaagtctgtcttcaagaagttcaactggagatacctggtc
atagacgaagcgcacagaataaaaaacgagaagtctaagctctctgaaatagttcgtgag
tttaagacgactaacaggttgctgctcactgggactccgttacagaacaaccttcacgag
ttgtggtccctgctcaacttcctgttacccgacgtcttcaattctgctaatgattttgac
tcgtggttcgacaccaacaactgccttggggatcagaaacttgtggaacgtctgcatgct
gttctaagacctttcttgctgcgtcgcatcaaggctgaagtggagaagagcttgccgccg
aaaaaagaagtgaaaatttaccttggcctcagcaaaatgcagagagagtggtacactaag
atactgatgaaggacattgacattctgaattccgctgggaagatggataaaatgcggctg
ttgaatatcctgatgcagttacggaagtgttgcaaccacccgtacctgtttgatggagcc
gagcctgggcctccttacaccaccgacacccatctcgtcaccaacggaggcaagatggtg
gtgctggacaaactgctccccaaaatgaaagagcaaggttccagagttctgatcttcagt
cagatgacccgggtattggacattctggaagattactgcatgtggagagggcatgagtac
tgtcgccttgatggacagacgcaccatgaagaaagagaggaagcaatagaaaccttcaat
gctccgaacagctcgaagttcatttttatgctgagcaccagagcgggaggccttgggatt
aacctggcaactgcagatgttgtgattctgtacgactctgattggaatccacaagtagat
ctgcaagcaatggaccgcgctcatcgtatcggtcagaagaaggcagtgcgagtgttccgc
ctcatcactgacaacacagtggaggagaggattgtagagcgcgcggagatgaagttgaga
ctggactccattgtaattcagcaagggaggttaattgatcagcagtctaataaacttgca
aaggatgaaatgcttcagatgatccggcacggtgccactcatgtctttacctccaaggac
agcgagttgacagatgaagacataaattcaatccttgaaaggggtgcaaagaagaccgcg
gaaatgaatgagcgtttggaaaagctgggggagagttcgctgagaaacttcactgtcgat
acagaaactagtctgtacaactttgagggggaggactatagggaaaaacaaaagcttagt
ctgatggagtggattgaaccaccgaaaagagagcgcaaggctaattacgctgtggatgcg
tatttcagagaggcgctccgagtcagtgaaccaagggctcctaaggccccacggcccccg
aagcagccaaacattcaagatttccagttttttccaccacgcctctttgagttgctagag
aaagaaatactttactacaggaagactataggatataaggttcccaggaactctgacctt
cccaacgccactcaagtccagaaagaggaacagaggaagattgatgaggctgaaccttta
acaccagaggagacagaggagaaggaaaagctacttacccaaggtttcacaagctggaac
aagcgagacttcaatcagttcataaaagcaaatgagaaatacggccgtgatgatattgat
aacattgctcgtgaggtggaggggaaaactccagaggaagtcattgaatattcggctgtt
ttttgggaacgttgcaatgagcttcaggacattgagaagataatggcacagattgagcga
ggagaagcccggattcagaggaggatcagcatcaaaaaagcgctggatgcaaagattgca
aggtacaaggctccatttcaccagctgagaatacagtatggaaccaacaaagggaagaac
tacaccgaggaagaggaccggtttctgatctgcatgctgcataagatgggcttcgataaa
gaaaacgtctacgaggagctccggcagtgcgttcggaatgcaccgcagtttagatttgac
tggtttatcaagtccaggactgcaatggaactgcaaagacgctgcaacactctcatctct
ctgattgagaaggagaacatggagatcgaggagaaagagcgcgcagagaagaagaaacga
gcacctaaagtagcagcggcacagaaaagaaagacggatgcccctgcagattcctccgtt
cgaaaggacaagaaaatgaaatcataa
DBGET
integrated database retrieval system
