Acipenser ruthenus (sterlet): 117412628
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Entry
117412628 CDS
T07327
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117412628
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
117412628
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GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
NCH2
Motif
Other DBs
NCBI-GeneID:
117412628
NCBI-ProteinID:
XP_033877034
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Position
21:complement(6273377..6318511)
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AA seq
629 aa
AA seq
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MITPAFELSQEQHFLTITVHVPYARASEFDLYIDGEDFKLYAKPYFLRLTLPGRIVEDGR
EKASFDVDKGLFTIRIPKETPGQHFEGLDMLTALLAPKGSRSAKPLVEEMEGCAVTEEEE
EEEFDWQIDQTPYVVTTEEELNSLCKYGFGNQRAGVFTRLQDELGDVIDVKSPDNTTAAE
RRQNRLAAEQAKFDPDHYLADLFEDDYIHHLLKYQPWWIEARNEREKKLRTCLEQHTEEA
TVTFSEEEKEQLRKFTNKSYLLDKKASQQVWISLVDIILAYAYEVRATEGETNVESAWNI
RKLSGTLSWLESYNSIQNVLESCGRRVLCYPLYRHFKLIVAAIHDTSVILQLGKACVLKC
LLAIHRIFRENDPAYILNDLYISDYCVWIQKAKSKKVVALAEVLLKTKLRKADLGFELEE
LEAAALLVQEEENRLTAACQVSRQRQSSSESEEETGDSGESSSCSSSGTDESDSEKGDSP
GRAKDVQIKQPSIVEQKAGPPGATIIPVANPRAEQLDCAAELLADENAALSDSAVKKVQS
ASSSITRKLIEELGEQVHSVVKISEWSEGAASESCNMLQDEQAKPSVESTEHTVPGPAAA
AQQGNFLEVCPKRSPLLIIANSHEDVEDS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgatcactccagcatttgaactgagtcaagagcaacatttcctcaccataacggtccac
gttccctacgcaagagcgtcagagtttgacctctacatcgatggagaggattttaaattg
tacgccaaaccatatttcctgagattgaccctcccggggaggattgtggaggatggaaga
gaaaaggcctcttttgatgtcgataaaggactctttacaatccggatccctaaagagacc
ccaggtcagcattttgaagggctggatatgctgactgctcttcttgcaccaaaaggatcc
cgatctgccaaaccgttggtggaggagatggaaggatgtgctgtgactgaggaagaggag
gaggaggaatttgactggcagattgatcagaccccgtacgtcgtgaccacagaggaggaa
ttgaactctctatgtaaatatggctttggaaatcaaagagcaggcgtcttcacccgactt
caggatgaactgggcgacgtcattgatgtgaagagtccagacaacaccaccgcagctgag
cggagacagaaccgtctggctgctgaacaggccaagttcgatcctgatcattaccttgca
gacttgtttgaagatgattacatccaccaccttttgaaataccagccatggtggattgaa
gctagaaatgaaagggagaaaaagctacgaacatgtcttgaacagcatacagaggaagca
acagtgactttttcagaagaggaaaaggagcagctgagaaaattcaccaacaaatcctac
ctgttagataaaaaagcctctcagcaagtatggatcagcctagttgatataattctggca
tatgcctatgaagtccgtgccactgaaggagaaacaaatgttgaatcagcgtggaatata
aggaagttgagtggaacgctcagctggctggagtcatacaactcaattcaaaacgtcttg
gagtcgtgtggaagacgagtgctgtgttatcctctgtacagacacttcaaacttatagtg
gcagcaatacatgacaccagtgtgatattacagctgggaaaagcctgcgtcctgaagtgc
ttgttggctattcacaggattttccgagagaatgaccctgcctacatccttaatgatctt
tacatttcagactactgtgtctggattcaaaaggccaaatccaaaaaagtggttgctctc
gctgaggtcctcctgaaaaccaagctccgaaaggcagacctaggttttgaattggaggag
ctggaagcagcagctctgttagtacaggaagaagaaaaccgactaacagcagcttgtcaa
gtctccaggcaaaggcagagctcttcagagagcgaggaggagacgggggactctggtgaa
tcaagcagctgttcttcaagcgggacagacgagtccgattcagagaagggagattctcca
ggcagagctaaagacgtacaaatcaaacaaccaagcattgtggagcaaaaggctggtcct
ccaggagcaacgatcatccctgtggcaaatcctagagctgagcagttagactgtgctgca
gaactgctagctgatgaaaatgcagctctttcagattccgctgtgaaaaaggttcaaagt
gcctcttcgtcgataaccagaaaactaatagaagaactcggggagcaagtgcactcagta
gtgaagatctccgagtggtctgaaggggctgcttctgaaagctgtaacatgctgcaggat
gaacaagcaaagccttctgtagaaagcacagagcacacagtgccgggaccagcagcagca
gctcaacaggggaatttcttagaggtgtgtcctaagagaagccccttgctaatcatagca
aacagccatgaggatgtagaagattcttag
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