Acipenser ruthenus (sterlet): 117412842
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Entry
117412842 CDS
T07327
Name
(RefSeq) nucleolar and coiled-body phosphoprotein 1-like isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117412842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117412842
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
90S particles
Other 90S particles
117412842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH
LisH_WDR26
Motif
Other DBs
NCBI-GeneID:
117412842
NCBI-ProteinID:
XP_033877312
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All DBs
Position
29:11922403..11933113
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AA seq
1034 aa
AA seq
DB search
MSVKDRDPSGNELLRLIYQHLNENGYQKAAKELKLHVGQKAVPTQEASLQDIYSYWAKAP
EHLRKRKLNQVNSVSPRKKPRLSDPASSSESSDQEDTSKTQAKDSKTIGKSPGPAAVGKS
PGPAAVRKSPGPAVLEKILQSSSEEDSDSDSSEEEPGKKAAPVKPAATPAKATQGKVLQA
SPAASKLIQNKATPAKVSSPAPSKPVPATAKQSKAPGTAKKKESSESDSSESEEEKTPAV
KPLQKPAAPVSKAASSSEDSSSEDSDSKQEAKTKSQVTSVGKGPLPKAVQASTTPGKVAT
ATLASGTPSQVKSAPGKVIAGKGKGKETGSSESESSDSSESEEETTVQKSFIKPKANQAS
VLTGKQVDAKAAPGKISSAAPGRSTKPAPSQATATPKTAAVGKKKGQESSESDSSESSES
EEEKPPAQAAVRVPIANSLAGTPAKQVSKIHILGKASSPAPGKSPKPASSQVKASPKTAA
AGKKESSESDSSGSSESEEEEEKPCAVKTPLKPALKIAAATPESHVKQRGSAAASKPAAS
ESDSDSDDSSEEEEETPRKPLQKASVVKATTPVSKTPLKTLVKGTPAKPGAAKPTPGKVS
ALTQPAKTTPSQAKVTPKAGIGKEEDESSDSSESEEEERTPVTPVVKLQQKPEATLKRLA
VPTVSKTKACESESTEDSSDEDPAQTLQAQKALVAKVLQQNKCSVNPSPLKPGTVTPAWS
RNKTPVRPAGTPAGEDSSESDSSDTDLEKCREPARTPTVKTPANTNQKKEKVTPAWKSQP
QEEDSDSDSDSSEEEAATKPTLTVSTSAQKTSQKGAEKGALAVKAERKTKAKAAPRSPKP
TGGRTKETAVGKTIQQLLSIADSESPEPSDSDAEDEEATTAIKITGGKTQKTTGGKKQKN
TGGKRASGMTESEQSSSEERKRKRPAGTAAAGAKKEKKKEKKSKLAKKLRLTSEDGKSVS
PSSAKPSPISVKGEKREKKKKSMKDKKKKKFKNTPFRPARGFSLGTPRSAGNSPVLTQSQ
SAKKKKKSKLTLSQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttaaagatagggacccttctggaaacgaattattgcgtttgatttatcagcat
cttaatgaaaatgggtaccagaaagcagctaaagaactcaaactgcacgttgggcagaag
gctgtacctacgcaggaggcttccctccaagacatctactcttactgggcaaaagccccg
gaacatttgaggaagagaaagttaaaccaggttaatagtgtttctccgcgcaagaagcct
cgcctatccgatcctgccagcagcagtgagagctctgaccaggaggatacaagcaaaact
caggcaaaggacagtaaaacaataggtaagtctccaggccctgctgcggtagggaagtct
ccaggccctgctgcggtaagaaagtctccaggccctgctgtcctggaaaagatactccag
agcagcagtgaggaagactcggactcagactcctcagaggaagaaccagggaaaaaagct
gccccggtaaaaccggcagcaactccggccaaagccactcaaggaaaggttctccaggcc
agccctgctgcctcaaagctcatccaaaacaaggccaccccagcaaaggtatcaagccca
gccccgagcaagcctgtgcctgccactgctaaacagtctaaggctcctgggactgcaaag
aagaaggagagctctgagagtgactcgtcagagagcgaggaggaaaagacaccagctgtg
aaaccactgcagaagcctgcagctccagtttctaaggcagcaagcagcagtgaggattca
tccagtgaggattcagactccaaacaagaagcaaagacaaaatcccaggtaacgtcggtg
ggaaagggaccccttcctaaagcagtccaggccagcaccaccccgggaaaggttgccacg
gcgaccttggcctcaggcacaccttctcaggtgaagtcagcaccggggaaggtcatagct
gggaaagggaaggggaaggagacaggaagttcagagagcgagagcagtgattcgtcagag
agtgaagaagagacaacagtacagaaatccttcatcaagccgaaggcaaatcaagcgtct
gtactaactgggaagcaagttgatgcaaaggctgccccgggaaaaatttcttctgcagcc
ccagggagatccaccaagccagctccaagccaggccacggccacgccaaagactgctgca
gtggggaagaagaagggacaggagagctcagagagcgacagcagtgaatcttcagagagt
gaggaggagaagccacctgcacaggcagcagtcagggtgccaatagcaaattcactggca
ggaacaccagcgaagcaagtcagtaaaatacatattttggggaaggcttcttctccagcc
ccaggcaaatcccccaagccagcttcaagccaggtcaaagccagcccaaagacagctgca
gcggggaagaaggagagttcagagagtgacagcagtggctcttcagagagtgaggaggaa
gaggagaagccatgtgctgtcaaaactcccctgaagccagctctcaagattgctgcagcg
actccagaatctcatgtaaaacaaagggggtctgctgctgcatccaaacctgcagcctct
gagtctgacagcgacagtgatgactccagtgaggaggaggaggaaactccaaggaaacct
cttcagaaagcatctgttgtaaaggcaaccacccctgtttctaaaactcctttgaaaaca
ctcgtcaagggcactcctgccaagccaggggcagctaagccaaccccagggaaggtttca
gctctgacccagcctgcaaagaccacacccagccaggccaaagtaacccccaaggcaggg
attggaaaggaagaggatgagagcagcgattcatcagagagtgaggaggaggagcgcacg
ccagtcacaccagtagtaaagctacagcagaaacctgaagctaccctgaagcggttagct
gtgcccacagtttccaagacaaaggcttgtgagagtgagagcactgaggattccagcgac
gaagacccagcacagacccttcaagcacagaaggccctggttgccaaagtactgcagcag
aataagtgttcagtgaacccatcccccctgaaacccggcacagtgacgcctgcatggagc
aggaacaagactcccgtgaggccagcggggactccagcaggggaggacagctctgagagc
gacagcagtgatacggatctggagaagtgcagagagccggctcgcacgcctacagtgaaa
actcctgcaaacaccaatcagaaaaaggagaaggtaacccctgcatggaagagccaacca
caggaggaggacagtgactcagacagtgactcttctgaggaagaagccgcgacaaagcca
actttaactgtaagcacctcagcacagaagacaagccaaaagggagcagagaaaggagca
ctggcagtgaaagctgagaggaaaacaaaagccaaggctgcacctaggagtcccaaacct
actgggggcaggactaaagagactgccgtggggaagacgatccagcagctgctttccatt
gcagacagcgagtcaccagagccctctgacagcgacgctgaggatgaggaagccactacg
gccatcaaaatcactggaggaaagacacaaaaaaccactggaggaaagaaacaaaaaaac
actggaggaaagagagcgtcagggatgaccgaatcggagcagtcttcttctgaggagagg
aagagaaaacgacctgctggcactgctgctgcaggggcaaagaaagaaaagaagaaagag
aagaaatcaaagctggctaaaaagctgaggctgacaagcgaggacggcaaatctgtctcc
ccatcaagtgcaaagccaagccctatttcagtaaagggagaaaagcgggagaaaaaaaag
aagtcaatgaaagacaagaagaagaaaaaatttaagaatacccctttccggcctgctcgt
gggttcagtttgggcacaccccgctcggctggtaatagccccgtactaacacagtctcag
tcagcaaagaaaaaaaagaagagtaaattgacactgtcccagtaa
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