Acipenser ruthenus (sterlet): 117412930
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Entry
117412930 CDS
T07327
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03082
ATP-dependent chromatin remodeling
arut03083
Polycomb repressive complex
arut04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117412930
03083 Polycomb repressive complex
117412930
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117412930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117412930
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117412930
Histone modification proteins
HAT complexes
HATB complex
117412930
HDAC complexes
Sin3A-HDAC complex
117412930
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117412930
PRC2.2
117412930
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117412930
Heterochromatin formation proteins
Other heterochromatin formation proteins
117412930
Chromatin remodeling factors
NuRD complex
117412930
NuRF complex
117412930
NuRF complex (fruit fly)
117412930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_EML
WD40_Gbeta
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR3_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
MIOS_WD40
eIF2A
WD40_MABP1-WDR62_1st
ASA1
CFAP251_N
Beta-prop_SPT8
DNAI3_WD
Beta-prop_IFT140_1st
PAC11
Beta-prop_VPS8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
117412930
NCBI-ProteinID:
XP_033877461
LinkDB
All DBs
Position
25:12210399..12218695
Genome browser
AA seq
427 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGYLLSASDDHVRKTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHL
LHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKT
VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE
DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGA
ADAEVQG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagaagcagcgtttgacgatgcggtggaggagcgtgttattaacgaggag
tacaagatctggaagaagaacaccccctttctgtatgacctggtgatgacacacgctctg
gagtggcccagtcttacggcacagtggttaccagatgtcaccaggcctgaagggaaggac
ttcagcgttcacaggttggtgctcggcactcacacctctgatgaacaaaaccaccttgtc
attgccagcgttcaactgcccaacgacgatgcccagtttgatgcttctcattatgacagc
gagaaaggagagttcggtggatttggatcagtcagcgggaagattgaaatagaaatcaaa
atcaaccacgagggggaagtgaaccgggcccgctacatgccacagaacccgtgcatcatc
gctacgaaaaccccaaccagtgatgtgctggtgttcgactacacaaagcacccctcaaaa
ccagatccctcaggcgagtgcaatccagatctgcgtttacgagggcatcagaaagaaggg
tatggtctgtcctggaaccccaacctcagcggctacctgctgagcgcgtcggacgatcat
gtaaggaaaacgatctgtctgtgggatatcagcgctgtcccgaaggaggggaaagtggtg
gacgcaaagacaatcttcaccgggcacacagcggtggtggaggacgtgtcgtggcatctg
ctgcacgagtctctctttggatcagtcgctgatgatcagaaactcatgatctgggacacc
aggtctaacaatacatcaaaaccaagccatgctgtcgacgcccacactgccgaagtgaac
tgcctgtcctttaacccctacagtgaatttattctggcaacaggctctgcggacaagact
gttgcactttgggacttgcgtaacttaaaactgaagttacactcgtttgagtctcacaaa
gacgaaatcttccaggttcagtggtctcctcataatgaaactattctggcatccagtgga
actgacaggcggctcaatgtctgggatttgagtaaaattggcgaggaacaatcacctgaa
gatgcagaggatggacccccagagttgctgtttatccatggtggacacacggccaagatt
tctgatttctcatggaaccccaatgaaccttgggtgatatgctctgtatcagaggacaac
atcatgcaagtctggcaaatggctgagaacatttacaatgacgaagaccctgaaggagct
gcagatgcagaagtacaaggctga
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