Acipenser ruthenus (sterlet): 117412997
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Entry
117412997 CDS
T07327
Name
(RefSeq) ras GTPase-activating protein-binding protein 1-like
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117412997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117412997
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117412997
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117412997
5.6.2.5 RNA 5'-3' helicase
117412997
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117412997
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117412997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
MukE
Motif
Other DBs
NCBI-GeneID:
117412997
NCBI-ProteinID:
XP_033877573
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All DBs
Position
29:2981107..2987814
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AA seq
469 aa
AA seq
DB search
MVMEKPSALLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSSGKPAEAVHGQAE
IHKKVMSLSFRDCHTKIRHVDAHASLNDGVVVQVMGELSNNMQPMRRFMQTFVLAPEGTV
ANKFYVHNDIFRYQDEVFGDSDTELPEESEEEVEEPEDRPHSPDVVQDDAYYEQSASHEL
EEHLEEQLVTPEPEPEPEPELVVEVKPEPGVEEEPCAVEHVEKCPSPTPADPAPTIQEDS
RVFSWASVTSKNLPPSGVAPVSGIPPHVVKAPVAQPRVEPKPETQTTAQRPQRDQRVREQ
RPGAPIHRAPRPVREGEQGEVEVRRVVRYPDSHQLFVGNLPHDVDKAELKEFFEGYGNVV
ELRINSGGKLPNFGFVVFDDPEPVQKILANKPIKFRGDVRLNVEEKKTRAAREGDRRDIR
PRGPGGPRDKFSGGVRGPPSRGGVMSQKPSFGAGRGAGPSEGRYMGPRQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgccctgctggttgggcgggagtttgtcagacagtactac
accctattgaaccaggcaccagactacctgcacaggttttatgggaagaattcctcttat
gtccatggtggtctggacagcagtggaaaacctgctgaggctgttcatggacaagctgaa
attcacaagaaggtgatgtccttgagcttccgagattgccacacaaagatccgccatgtg
gatgcccatgcctctctgaatgatggggttgtggttcaagtgatgggagagctttccaac
aacatgcagcccatgaggaggttcatgcaaacttttgtgctggcacctgagggtactgtt
gcaaacaagttctacgttcacaatgacattttccgctaccaggatgaagtctttggggat
tcagacactgaacttcctgaggagtcagaagaggaagtagaggagccagaagacagacca
cactccccagacgtagtccaggacgatgcatactatgagcagtctgccagtcacgaattg
gaagagcatttggaggaacagcttgtgacgccggaaccagaacccgaacctgagccagaa
cttgttgtagaagtgaaaccagaacctggagtggaggaggagccctgtgcagtggagcat
gttgagaagtgtccttccccaacgcctgcagatcctgcacctactatacaagaggactcc
agggtgttctcatgggcatctgtcaccagtaagaatcttccccctagtggggtggcccca
gtctctggaattccacctcatgtagtcaaagctcctgtggcacagccaagagtggagcca
aaacccgaaacacaaactacagcacaacgaccccagagagaccagagggtaagggagcag
aggccgggagctccaatccacagggctccacgaccagttcgggaaggtgaacagggtgaa
gtagaagtgcgtcgcgtggtgaggtatccagacagtcatcagctctttgtgggaaaccta
ccccatgatgttgacaaggcagagctgaaggagttctttgaaggttatggtaatgtggta
gaactgcgaatcaacagtgggggcaagctgcccaactttggatttgtggtgtttgatgat
cctgagcctgtgcaaaagattctcgccaacaagcctatcaaattccgaggagacgtgcgc
ctgaatgttgaagagaagaaaactcgcgctgcgcgggaaggtgaccggcgggatattcga
cccagggggcctggaggtccacgtgacaagtttagtggaggagtccgggggcccccatcc
cgaggcggggtgatgtcacagaaacccagctttggcgcgggacggggtgctggacccagc
gaaggccgctacatgggacctcgccagtga
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