Acipenser ruthenus (sterlet): 117413046
Help
Entry
117413046 CDS
T07327
Name
(RefSeq) slit homolog 3 protein-like
KO
K06850
slit 3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117413046
Glycosaminoglycan binding proteins [BR:
arut00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117413046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRR_9
LRRNT
LRRCT
EGF_TEN
hEGF
LRR_14
LRR_EndoS
EGF_CA
EGF_3
JAG1-like_EGF2
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117413046
NCBI-ProteinID:
XP_034764309
LinkDB
All DBs
Position
29:complement(1009428..1112246)
Genome browser
AA seq
1499 aa
AA seq
DB search
MSLPRVQERWAPCLGQTLLLCGLLFLIVVDGCPSKCSCSGPNVDCHGQGFKSVPRGIPRN
AERLDLDRNNITRITKVDFAGVKNLRVLHLEDNQISVIERGAFQDLKQLERLRLNRNKLQ
VLPELLFQTTPKLGRLDLSENLIQAVPRKAFRGITSVKNLQLDSNRISCIEDGAFRALRD
LEILTLNSNNITLIPLSSFHHMPKLRTLRLHSNNLHCDCHLTWLSDWLRQRRGIAQFTQC
MAPAHMRGLNVADAQKKDFICTGPQPKEPHTCSAQASSCPPSCTCNNNIVDCRGKGLTEI
PANLPEGIVEIRLEQNLIKSIPRGAFSQYKKLKRIDLSKNQIVDIAPDAFLGLRSLTSLV
LYGNKIVEIPKGLFEGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKG
LFTPLRSIQTLHLAQNPFVCDCHLKWLADYLLNNPIETSGARCSHPRRLANKRISQVKGK
KFRCSGSEDYRTRLSGDCFQDLVCPERCRCEGTVVDCSNQKHTRIPAHLPDHTTDLRLND
NDIHVLEASGIFKKLPNLRNINLSNNKLREVREGVFDGASGVQELLLTGNQLETVQGRMF
RGLTGLKTLMLRSNLLSCIDNNTFTGLGSVRLLSLYDNRISSITPGAFSSLVSLSTINLL
SNPFVCDCHLAWLGHWLKRRKVVSGNPRCQKPAFLKEIPIQDVALPDFTCDGTEESSCLP
LPRCPESCTCTDTVVRCSNRGLRSLPKGIPKDVTELYLEGNVLTAVPKELASLKHLSLID
LSNNSISSLAPLTFSNMTQLSTLILSYNQITGHRYSAALQPTTEETSLFTVMSLSSFPLL
TRVFVVSSTLHGNDLSAVPEGAFNDLTSLSHLALGANPLYCDCNLRWLSEWVKAGFKEPG
IARCTGPPDMADRLLLTTPLNKFQCKASQDLPQLSKCNPCLSSPCWNNGTCTSDPTGYYR
CTCPFGYKGRNCEVAINACIGSPCANGGTCNLHIGRGEQFSCLCPEGFEGERCQINPDDC
DDNDCENNSTCVDGFNNYTCLCQPNYTGELCEEVIDPCASGLNPCQHDSKCLALSKGYRC
ECLPGYIGELCEKDYDDCLENKCRHGAQCVDAINGYTCVCPDGFSGLFCENPPPMVLLQT
SPCDHFDCQNGAQCLMVSGEPVCRCLPGFYGNKCHQIVTVHFLGKESYVELPVARGQQST
NISLQVATDKDNGILLYKGDNDPLALELYQGHIRLIYDIANYPPTTVYSVESVNDGLLHT
VELLIQNHAVSLIVDRGTPKSLGKLQRPSSLSTSTPLYIGGIPGVLGGAGLRHGQDRGPT
GFDGCVHSVRLNGALQDLGGARRGGGGVLLGCHLCSVCAQGSCSHREGVGVTCECPPGRS
GPLCDPCQSYRCVHGECRLSDLGEPVCHCQPNYSGAACTELACQSEMIREFVKKQQAYTS
CTSSIKVPRVECRGSCSGGLCCTPTRTRRRKIMFQCTDGSSFTEELERPVECGCSKCPL
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcccagagtacaggagcggtgggcaccgtgcctcggacagaccctgctgctg
tgtggattactctttttgatagttgtggatggatgcccctctaaatgtagctgctccgga
cccaatgtggattgccacggccagggcttcaagtccgtccccaggggcattccacggaac
gcggagagactagacctggaccgaaataacatcacccggatcactaaagtggacttcgct
ggagtaaagaacctgcgggttttgcacctggaagacaaccagatcagcgtgattgagaga
ggcgcgttccaggatctgaaacagctggaacgactgcgcttgaacaggaacaagctgcaa
gtccttcccgagctgctgttccagaccacgcccaagctgggtcgcctggacctgagtgag
aacctgatccaggctgtcccacgcaaggctttccgtgggatcaccagcgtcaagaacctg
caactggacagcaaccgcatcagctgcattgaagatggtgccttcagagccctgcgggac
ctggagattctcactctcaacagtaacaacatcaccctcatcccgctctccagcttccac
cacatgcccaaactgcgcactctacgcctccactccaataacctgcactgcgactgccac
ctcacctggctctctgattggctgcggcagcggcgggggattgcgcagttcacgcagtgc
atggctccggcgcacatgcggggcctcaacgtggcggatgctcagaagaaggatttcatc
tgtacaggtccccagcccaaggagccccatacctgcagtgcccaggcctcatcctgcccc
ccctcctgcacctgcaacaacaacattgtggactgccgaggcaaggggctcaccgagata
ccagccaacctgccagagggcatcgtggaaattcgcttggagcaaaacctgatcaaaagc
atcccccgtggcgccttctcccagtacaagaagctgaagaggatagacctcagcaagaac
cagatagtggatatagccccggatgccttcctgggtctccgctccctcacctctctggtg
ctgtacgggaacaagatcgtggagatacccaagggactgttcgaagggctcgtctcactc
cagctgctgctgctgaacgctaacaaaattaactgcctgcgcgtgaacaccttccaggac
ctgcagaacctcaacctgctgtctctgtacgacaacaagctgcagaccatcagcaagggg
ctcttcactcctctgcgctccatccagacactgcacctggctcagaacccctttgtgtgc
gactgtcacctgaagtggctggctgactacctgctgaacaaccccatcgagacgagtgga
gcgcgttgcagtcacccccgccggctcgccaacaagcgcatcagccaggtcaagggcaag
aagttccgctgctcaggctccgaggattaccgcactcgtctcagtggggattgtttccag
gacttggtgtgtccggagcgctgccgctgcgaggggactgtcgtcgactgctccaaccag
aaacacacccgcatcccagcccacctccccgaccacaccactgaccttcggctgaatgat
aatgacatccatgtcctggaggcgtcagggatcttcaagaagcttccgaacctgcgtaac
attaacctgagtaacaacaagctgcgagaggtgcgcgagggggtcttcgatggggcgtcg
ggggtccaggagcttctgctgactgggaaccagctggagacggtgcaggggcgcatgttc
agaggactgacaggactcaagacactgatgctgaggagtaacctgctcagctgcatcgac
aacaacaccttcacagggctcggctccgtccggctgctgtccctctacgacaaccgcatc
tccagcatcacccccggagccttcagcagcctggtgtccctctccaccattaatctgctg
tcgaatccgtttgtgtgtgactgccacctggcctggctgggacattggctgaagaggagg
aaggtggtgagtgggaacccgcgctgccagaagccagccttcctcaaggagatccccatc
caggatgtggctctgcctgacttcacctgcgacggtacggaggagagcagctgcctgccc
ctcccccgctgcccggagtcctgcacctgcactgacactgtggtgcgctgcagcaaccgg
gggctccgctctctgcccaagggcattcccaaggacgtgaccgaactgtatctggagggt
aacgtcctgactgctgtcccgaaggagctggccagcctcaaacacctgtccctcattgac
ctgagcaacaacagcatcagctctctggctccactgacattcagcaacatgacccagctg
tccactctcattctgagctacaaccagatcacagggcatcgttattctgctgctctgcag
ccaactacagaagaaacatcattattcactgtgatgtcgctctcctccttccctctccta
acacgtgtttttgttgtttccagcactctccatggcaatgatctgtcagctgtccctgaa
ggagccttcaatgacttaacctctctgtcccatctggctctgggagcgaaccccctgtac
tgtgactgtaatctgcgttggctctcggagtgggtgaaggctggcttcaaggagccgggg
attgcccgctgtaccggcccccccgacatggcggacagactcctcctcaccacacccctc
aacaagttccaatgcaaagcctcccaagacttgccccagctgtccaaatgcaacccctgc
ttgtccagcccctgctggaacaatggtacctgtaccagcgaccccactggctattaccgc
tgtacctgccccttcggatacaagggtcggaactgcgaggttgctatcaacgcctgcatc
ggcagcccctgtgccaacggaggcacctgcaacttgcacatcggcagaggggagcagttc
agctgcttgtgtcctgaggggtttgagggggagaggtgtcagataaacccagacgactgt
gacgacaacgactgtgagaacaactccacctgcgtggacggcttcaacaactacacctgc
ctctgccagcccaactacacaggtgagctctgtgaggaggtgatcgatccctgtgcttca
ggactgaacccctgtcagcacgactccaagtgcctcgctctctccaagggatatcggtgc
gaatgtctcccggggtacatcggcgagctctgtgaaaaggattacgacgactgcctcgag
aacaagtgccgccacggcgcacagtgcgtcgacgccatcaacggttacacctgcgtctgc
ccggacgggttcagtggtctgttctgtgagaaccctccccccatggtcctgctccagacc
agcccgtgcgatcacttcgactgtcagaacggagcgcagtgcctcatggtgtctggagag
cctgtgtgccgctgcctgcctggcttctacgggaacaagtgccaccagatcgtcaccgtc
cacttcctgggcaaggagtcgtacgtggagctgccagtggccaggggccagcagagcacc
aacatctcactgcaggtggcgacagacaaagacaacgggatcctgctctacaagggggac
aacgacccactggcactggagctgtaccaggggcacatccgcctcatctatgacattgcc
aactacccgcccaccaccgtgtacagtgtggagtctgtgaacgacgggctgctgcacaca
gtggagcttctgatccagaaccacgcggtgagcctgattgtggacagggggaccccgaag
agcctggggaagctccagagaccgtcctccctcagcaccagcaccccgctctacatcgga
gggatcccgggtgtgctgggtggggcagggctgaggcacggtcaggatcgcggccccact
ggtttcgacggctgcgttcacagcgtgcgtctcaacggggccctgcaggacctgggcggg
gcacggcgggggggcgggggggtgctgctgggctgccacctctgcagcgtgtgcgcgcag
gggtcctgcagtcacagagagggcgtgggggtgacctgcgaatgccctcccggacgcagc
ggcccgctgtgtgacccctgccagagctacaggtgtgtgcatggggagtgccggctcagt
gacctgggagagcccgtctgccactgccagcccaactacagcggagcagcctgcacggag
ctggcgtgccagagtgaaatgatccgcgagtttgtcaagaagcagcaggcctacacgtcc
tgcacctccagtatcaaggtgccccgggtggagtgcagggggtcctgcagcggggggctc
tgctgcacccccaccaggacgaggcgacggaagatcatgttccagtgcacagatgggtcc
tcgttcaccgaggagctggagaggccagtggagtgtggctgttcaaagtgcccgttataa
DBGET
integrated database retrieval system
