Acipenser ruthenus (sterlet): 117413061
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Entry
117413061 CDS
T07327
Symbol
sec16b
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117413061 (sec16b)
Membrane trafficking [BR:
arut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117413061 (sec16b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
117413061
NCBI-ProteinID:
XP_033877691
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All DBs
Position
10:5187788..5201352
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AA seq
982 aa
AA seq
DB search
MDSRGYQWHDPRQPQTPSYYSQRPPSQSDYPHRPNTRDGYHSNNRPPPMPGTQGDMYHPN
LDPRAGHWAQSGPREGYPVSSPPHRPDLQPAYMSTPLSRPGYHTEKPLGRSHSRQGYDYP
SQNYPARDPREDYGYYDYGYQRGQHQYRDAERWNPINPHQDYWNQGPYQDRRYEQERIHD
IYSEPHPDRYNEHAGSYQYDYNSEKNHSGGHAEETGGDHGELPLYGSGCLADAKASGLSS
SGYELSQYIDSTDQSHHPPQNHWSPVQTESAVIPALSAPLKFPLPHVRVSFCPGGQLVRV
SPNLPSQGEPALIEIHSLEVILVDTQEQEEMRAFPGPLVREDLHKVDAITFSQHRADACW
KEESLRDKPSAALLWNLLVLLCRQNGRIVGSDIAELLMKDSKNPGHCEEGTGSLIDLTEE
TTPLGNSTDMPDLLTGETTRSAESPAQALHKYTTLLLAGRKKEALEAAMRSGLWGHALFL
ASKMDNRAYTTVLNRFTGSLAVSDPLQTLFQLLSGRIPAVATCCGDEKWGDWRPHLSVIL
SNQTGDPGLNQKALITTGDTLAAKGLTDAAHFCYLMGRVHFGVYTVQSEKLVLLGSNHSL
PFLKFARTSAIQRTEVFEYCQQLGKPTFCIPSFQVYKLIYACRLLDYGLASQAFHYCEVI
GNAILKLDACSEVLLGELIKLAERLKLSDPQVHESPEEQQTIEPDWLKQLRVRHRQLQMG
DDSYTEKYQQPVPRTSIQHTENGPTTAGQIINKEEFPLPTVASELQGQWPAVFYPPNPLP
VTSELQTYQPSLPQESTAPPQTVIEQGQSIPAVPPQAEGQAYPFQFTTDHTPQHLAQGSG
MEGFPMETESAYGMNSIPGDYTSKEEESQSEFSQPKPADQEGEEEQAKIQTDKGSRFGWF
GWFRSKPENHPQNQASNKEELNETDPVVKQPNSTSAPPPTMIQAPTLSAGGNPFSRKAGK
KNALHDSRPVPGIGPPTLTKGP
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggattccagaggttatcagtggcatgacccaaggcagcctcagacaccgtcttactac
tcacaaagacccccctcccaatctgattatccacacaggcctaacaccagggatggctac
cacagcaacaacaggcctcccccgatgcctggaacccagggtgacatgtatcacccaaac
ctagaccccagagctggacactgggcacagtcaggtcccagggaaggctaccctgtcagc
agccccccacacagaccagacctccaacctgcctacatgagcactcctctttccagacca
gggtaccacacagagaagccattgggaagatcccattcaaggcagggctacgattatcct
tctcagaactatccagcccgcgaccccagagaggattatgggtactatgactatggctat
caaagaggacagcatcaatacagagatgctgagcgatggaatcccatcaatccccaccaa
gattactggaaccaaggcccataccaagacagacgatatgaacaggagaggattcatgat
atatatagtgaacctcacccagacagatataatgagcatgcagggagttaccagtatgac
tacaactcagagaaaaaccacagcggaggccatgcagaggagactggaggtgatcacgga
gagctccccttgtatgggtcaggctgccttgctgatgctaaagcctctggactgtcctcg
agtggttatgagctgagccagtatattgattccactgaccagagccaccatcctccacag
aatcactggagtcctgttcagacagagagtgcagtgatccctgcactcagtgcccctctc
aagtttcctctgccccatgtccgggtcagtttctgccctggaggtcagctggtccgagtg
agtcccaacctgccttcacaaggagagccggcgctcattgagatacacagcctagaggtg
attcttgttgacacccaggaacaggaagagatgagggcgttccccggtcctttagtaagg
gaagatctccacaaggtggatgcaataacattttcccagcacagagccgacgcttgctgg
aaagaggagtccctgagagacaagccctctgctgccctcctttggaacctgttggtactg
ctgtgcagacagaatggaagaatcgtcggctcggatatagccgagctcttgatgaaagac
agtaagaacccggggcactgcgaggaaggcacagggagcctgatagacctgacagaagag
acgactccactgggcaacagcacggacatgccggaccttctgactggagaaaccacacgc
agcgcggaatcacctgcccaggcactgcacaaatacaccacgctgctgctcgctgggaga
aagaaagaagctcttgaggcagcgatgagaagtggcctctggggtcatgctttgtttttg
gccagtaaaatggataacagggcctacaccactgtgttaaacaggttcacaggcagcctg
gctgtcagcgatcctctgcaaacactgtttcagctgctctcggggaggatacctgcagta
gctacatgctgtggggatgagaagtggggagactggagaccccacctttctgtgattctc
tcaaatcagacgggtgatccggggctaaaccaaaaagctctcattaccaccggggacacg
ctcgctgctaagggtttgacagacgctgcccatttctgctatttgatgggacgggttcac
tttggtgtgtacacagttcaatcagagaagctggtactattaggcagcaaccacagtctg
cccttcttgaagtttgccagaacttcagctatccagcgtaccgaagtgtttgagtactgc
cagcaactgggcaagccaactttctgtattccctctttccaggtttataaattgatttac
gcatgccgcttgctggactatggactcgcctctcaagcattccattactgtgaggttatt
ggcaatgccatcctgaagcttgatgcctgctctgaagtgcttctgggagagctgatcaag
ctagcagagagactgaaactatcagatccacaggttcacgaaagcccagaagagcagcaa
accatagagcctgattggctgaagcaactgcgggtcagacacagacaactacagatggga
gacgatagctacactgaaaaatatcaacaaccggttccaagaaccagcatccaacacaca
gagaatggcccaaccacagcaggtcaaattataaataaagaggagttcccgctacccacg
gttgcctcggagttgcaagggcagtggccagctgtgttctatcctccgaatcccctccct
gtcaccagcgaactacagacgtaccagcccagcctcccccaggagagcaccgcccctcca
cagacagtaatagagcaggggcagagtatacctgcagtgcccccacaggctgaaggtcag
gcttaccccttccagtttaccacagatcacaccccacagcacctggctcagggcagtgga
atggaagggtttccaatggagacagagtcagcctatggaatgaactccattccaggggat
tacaccagcaaggaagaagaaagccagtctgaattcagccagcccaaacctgcagatcag
gagggagaagaagaacaagcaaagatccagactgacaagggctctcgttttggctggttt
ggttggtttaggtcaaagcctgaaaaccatccacagaatcaagcaagcaacaaagaggag
ctgaatgaaactgatcctgtggtcaagcagccaaattctacatctgctcctccccccaca
atgatccaggcacccacattatcggcaggagggaacccattttctagaaaagctgggaaa
aaaaatgctttacatgacagcaggccagtccctgggatagggcctcccacactcacaaag
ggaccctga
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