Acipenser ruthenus (sterlet): 117413121
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Entry
117413121 CDS
T07327
Symbol
abca12
Name
(RefSeq) ATP-binding cassette sub-family A member 12 isoform X1
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117413121 (abca12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117413121 (abca12)
Transporters [BR:
arut02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117413121 (abca12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SRP54
AAA_30
MukB
DUF4162
AAA_24
AAA_15
AAA_23
ACDC
Motif
Other DBs
NCBI-GeneID:
117413121
NCBI-ProteinID:
XP_034780404
LinkDB
All DBs
Position
10:complement(48267752..48302077)
Genome browser
AA seq
2752 aa
AA seq
DB search
MMHDELALNQTLMEELCNQTCFPDDLISAAGILRQLINTTVSGLGKEDSIDGKELTKELK
TLYQAVVSYYESLRHFYTEISAATINSSTSVDSSIPALIDDLSTQHIVLGVSAALNPFLQ
QASVLPGLKQHIEAADWIMNYAMQNNYTGQDNCDNSSMSWSCKGTNELEMHSEKMIGILL
AVTKDPVLAGRLLQGTWEWVSHNSTLLSAYNSTAGAVMHLLKDDIELFLNVSLSLIMGAE
ADPSQLWKEALSCLLKDLLKNVNSSSLHQIWNGDILKDIEDPMQLANKLINNLASCLPAE
QRSLNVTLLRILETLPALSSGTNITGNVFSLTRAASHVLLEMLHVTSFPISNVTSAGNIV
DNLLQISELVTNALLARLPSNQLMGIAETFKAVEQLVTTLTPLLTSKQSHYLNATVQILK
TLVIHLYNNADALDISVTISESLLKLLGIIPDPTAQSVSSSAFKNLGASIRRVTEVYFSN
ATDLVKAGGITVIVASELQNVLKIVPPSYEVNKTLEVIKVIKDNVGSFLGINSTNWANAV
LQLLANTAELVPPELPYAHQFMNLMINLAKEAQEEFHVLSELSQILQTMFTTNWAADNVT
AALENLKIKKAQMSTVTGIVCELEKLRSVQALYDLVPMNSGIMCQTVSPAIQAVFSLSYS
TLNWGRNLTFSLNTLLYTLYNVVVGDLNNYNLNTKWSSVLVDSTLNFNTSAFNFLNITNT
TAAPTKVSDLILNPAAFVSEIHKRTGMPMDATDAMMQTIIPDNSSQLLAWLTELRYCDSP
GKLNLTQSGELVYRAFCKLGPLQQYNFVVIVLEHLDLIEFIYKIILTSDMQNVIEALMRL
FQFIMEMFQKMTPAIKLLISYLQQIQRLNLVANSEFKELVAGNRATMSSKATFNTLAGAM
CSRGFFSLFGVSQTPSFMDSKPSTQDDLNVDEIIEKFDIPRNATPFCLALYLDMVNTTGG
AVAWAFIKPMLLGKILYTPDTLETRAIMEKSNDTLQQLDKLKMYSQDWIDDIKLIFDSAQ
LLEKTLPLLLRSLQNPFVQNFIKLQTNVNVTDVLNILQTYSNLTKMLEENRKVMDQLTVL
STLMLNLSSCVNFNRIQPFSSIAEMNAMAKELLKTKELYASIIFKMPSKTSRRKRSAGAG
ISLPPEMKYTIRMVVQNSMRTDRIRNPSWTPGSYVSSNKNQRYNRGFINLQESIDRAIID
IQAGKKVKEPSVQLQAFPYPCYFKDNFLNSMSSSFPIVLMVAWVLFIAAFVKKLVHEREL
RLHEYMKMMGVNPSSHFFAWFIESACFLLVTIIIMTIILKAGKVFPNSDGFIMFLFLCDY
GFSILAMSFLISAFFDRTNVAGLSGSLVYIICFFPFIIMVTIESSLTFSTKNLLCLFAPT
CFSYAGQYIGYYEGQNIGIQWDNSYVSPLSNDTTSFGWLCWLLLIDSLIYFTVGWYIRIV
FPGKYGIASPWYFPVLPSFWAECCGFNTRRKDSGRGLLFTNIMLQSGNIDHKNKGNEGFT
SEGEAELEGLPVGVSLHSLTKLYGQTIAIQNLNLNFYEGHVTALLGHNGAGKTTTMSLLT
GLYSPSSGSVLVYGKDMQTHMDAVHRDMGVCMQYDVLFEHLTVKEHLLLYGQIKSPGWNK
DELNQQVRNTLKETGIYAHRHKRVGMLSGGMKRKLSISIAFIGGSKTVVLDEPTTGVDPC
SRRSIWDIVTRHKTGRTIILSTHHLDEAEVLSDRIAFLERGGLKCCGSPFYLKEKLGQGY
NLTLTRRVPPPGSEDYCVPDTVTRFIQSHLPEAQLKEKVGADLVYALPPFGAQRADAYRS
LLSELDRSLDTLRLGCYGISDTTLEEVFLQMTKDDENKDTAWSNTQMVVQVPSVDTMVSK
DSTTSNNVSDRQALTGSSSLGGARLFAQKVMGMLVKRIHHSRRDWKGLLAQIILPVLFVI
AAMGMGTIKNGIQEYPEINLSPALYGYDGQSVFFGLGNPSASDLVSKMMSFPGIDNVCLY
NPGNEQCLNKEGSGDWTSSGIAPASYKPCNCNTTVQVCPRDDYVPPHKKATSLQTVYNVS
QLDVENYLLSTANSFIQNRYGGWVFGNPLPVDLRMDFDPVPANRTLTKVWYNPEGYHTMP
AYLNSLNNFILRANLPPGVDSQKYDISVYSQPYTGGVLDEDTMVQSLVGMLVALCILTGY
SIMTASFVIYEVMEYQTGAKRLQHISGVGEIFYWIVNFIYDMTLYLLPVALSIAVIAAFQ
LPAFNNRQNLGAVSLLLVLFGFGTFPWMYLLAGTFKNAEMAFICYVSINLFIAINTIIST
SVVYFLSELKKDDLNVKEVYRVMSYVFLIFPQFNFGNGLMELSRVQLQVDILAVFGIDGY
KNPFSMDVLGWMFVALAIQGSLCFLLRLLLNTWLLRKMRILMCRMTAVMFHAADEDPDVK
AEQDRVDSGQASGDLLQLNKLSKLYQNIHKKVLAVNNISVGIPAGECFGLLGVNGAGKTT
TFKMLTAEIFPSNGNALVKDTDGSVVDIMDGSMEGINIGYCPQVDALDDLLTGEEHLYYY
ARIRGIPSQQIHNVVMHLLQRLELLPHKDKPTCQYSCGTKRKLSTALALIGCPQILLLDE
PSSGMDPKSKRHLWNIISEELKEKCAVVLTSHSMEECEALCTRLAIMVKGRFRCLGSLQH
IKNRFGSGFTVKMHLASSSLGVEHITTFMQSHFPSTFMKGHHSGTVEYHVPVAPGGVADI
FDQLECNKASLSIKHFSVSQTTLDEVFINFAKESSAEESEASSELSGQSVNT
NT seq
8259 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatgatgaacttgcactcaaccagaccctgatggaggagttgtgcaaccagacc
tgcttcccggatgacttgatctctgcagcaggcatcctcaggcagcttataaacacaacc
gtcagtggtttgggaaaggaggacagcatcgacgggaaagagttaacaaaggaactgaag
accctttaccaagcagttgtgagttactatgagagcctgaggcacttctatacagagatc
tcagcagccacaatcaacagcagcacttcagtggactccagcattcctgctctcatcgat
gacctctccacccaacacatagttttgggcgtctcggctgctctcaacccctttttgcag
caggccagcgtgctgccagggctgaagcagcacatcgaagcagctgactggataatgaat
tacgcaatgcaaaacaactacaccgggcaagacaactgtgacaactcgtccatgagctgg
agctgtaagggcacaaatgaacttgagatgcattcggagaagatgattgggattctctta
gccgtcaccaaggacccagtcctcgctggcagattgctgcaaggaacctgggaatgggtt
tctcacaacagcactcttttaagtgcatacaactccactgctggtgcagtgatgcacctt
ctcaaggatgacattgaactattcctgaatgtttcactcagtctcattatgggtgcagaa
gcagatccctcacagctatggaaagaagctctcagctgcctcctaaaggacctccttaag
aacgttaacagcagctcccttcaccaaatctggaatggagacatcttgaaagatattgag
gatccgatgcagcttgccaataagttaataaacaacttggcatcttgcctacctgccgag
caaagatctctcaatgtaactcttctcagaatattagaaacacttccagctctgtctagt
ggtactaacatcacaggtaatgtcttcagtctcaccagagcagcttcacacgtcctgctg
gagatgcttcatgtcaccagtttccctatttccaacgtgacttcagccggaaacattgtg
gacaatttgctccagatctcagaactggtaaccaatgcacttttggcaagacttccttct
aatcagctgatgggcatagctgagacatttaaagcagtagagcagttggtgacaacctta
acacccctgttgacttcaaagcaaagccactacctgaatgctacagttcaaatcctaaag
actctggtaatccacctgtacaacaacgctgatgcattggacatcagtgttaccatatct
gaatcccttctgaagcttttggggatcatccctgatcccacagcgcagtcagtgagcagc
agtgcttttaagaatcttggagcttccatcagaagagtgacagaagtctacttctccaat
gcaaccgatttagtaaaagcaggaggcattactgtcattgtggcaagtgagctgcagaat
gtgctgaaaatagttccccccagttatgaggtgaacaaaactctggaggtgatcaaggtc
atcaaagacaacgtgggcagttttctgggaataaattccacaaactgggctaatgcggtt
ctccagttgctggctaacactgcagagctggtgccaccagagcttccatatgcacaccag
ttcatgaacctgatgataaacctagctaaagaggctcaagaagaattccatgtgctgtca
gagttaagccagattctgcaaacgatgttcactacaaattgggcggcagacaacgtcaca
gcggctcttgaaaacctgaaaatcaagaaggctcagatgagtactgtgactggcattgtg
tgtgagttggagaagttgaggtctgtgcaggctctgtatgatctggtgcccatgaattcg
gggataatgtgccagaccgtttctccagccatccaggctgttttctcgctctcctacagc
actctgaactgggggagaaacctcaccttcagcctgaacactctgctgtacactctgtac
aacgtggtagtcggagacctcaacaactacaacctgaacacaaagtggtcgtctgtactt
gtggacagcacattaaatttcaacaccagtgctttcaacttcctgaacattactaacact
actgcagctcctacaaaagtgtctgacctgattcttaacccagcagccttcgtgtcagag
attcacaaacgaacaggaatgccaatggatgccacagatgctatgatgcagacaattatt
cctgacaactcttcacagttgcttgcttggttgacggaactgcggtactgtgactcccca
gggaagctcaacctgacccagtcaggggagctggtgtatcgggcattctgcaagctggga
cccttgcagcagtacaacttcgtggtcatagtccttgaacacctggatttgattgagttc
atttacaagatcatactgacctcggacatgcagaacgtcattgaagcgctgatgcggctc
ttccagtttataatggaaatgtttcagaagatgacccctgccatcaagctgttgatcagc
tacctgcaacagatccagaggctcaacctggtcgcaaactcggaattcaaggaattggtt
gctgggaatagggccacaatgtcgagcaaggccacattcaacacgctcgccggcgccatg
tgttccaggggattcttctccctcttcggggtctcacagacccccagtttcatggactct
aagccctccacccaggacgaccttaacgtggacgagatcattgagaaattcgacatcccc
aggaacgcaacacccttctgccttgcattgtacctggacatggtgaacaccactggtgga
gctgtggcctgggcgttcatcaagcccatgctgctgggcaagatcctgtacaccccagac
acgctcgagaccagggccatcatggagaagtctaatgacacattgcagcagctggacaaa
cttaaaatgtactcccaggactggatagatgacatcaaattaatctttgattctgcccag
ctacttgaaaagactcttccactacttctgcgctccctacaaaacccttttgtacagaat
tttattaagttacaaacaaacgttaacgtgaccgacgtcttaaacatactccaaacgtac
tcaaacttgactaaaatgttggaagagaaccggaaagtgatggaccagctgactgtcctc
tccacgctgatgctcaacctgtcctcctgtgtgaatttcaaccgcatacagccgttcagc
agcatagcggagatgaacgccatggccaaagagctcctcaagaccaaggagctgtacgct
agtatcatttttaaaatgccttcgaaaaccagtcgtcgaaagaggtcagctggtgctggc
atctccctgccccctgagatgaaatacaccatacgcatggttgtgcagaactccatgagg
actgacagaataagaaacccttcctggacacccggatcctacgtctcatccaacaaaaac
cagcgctacaaccgtggctttatcaacctgcaggagagcatcgacagggccatcatcgac
atccaagcaggcaagaaggttaaggagccatccgtccagctacaggccttcccctacccc
tgctacttcaaagacaatttcctcaacagcatgtcaagtagcttccccattgtcctcatg
gtcgcttgggtccttttcatcgctgcctttgtcaaaaagctggttcacgagagagagctg
agacttcacgagtacatgaagatgatgggagtgaaccccagcagtcacttctttgcctgg
ttcatagagagcgcctgcttcctcctggtcaccatcatcatcatgaccatcatcctgaag
gcgggtaaggtcttccccaacagcgatggctttattatgttcctgttcctgtgcgactac
ggcttctccatcctggccatgagcttcctcatcagcgccttcttcgaccgcaccaacgtg
gccggcctcagcggcagccttgtctacatcatctgcttcttcccattcatcatcatggtg
accatcgagtccagcctcaccttctcaaccaagaacctcctgtgcctgtttgccccaact
tgtttcagttatgcaggccaatacattggttactatgaagggcagaacataggaatccag
tgggataactcctatgtctccccattgtctaatgataccacctccttcggctggctctgc
tggctgctgctcatcgattccctcatctatttcactgtcggctggtacatccggattgtc
tttccagggaagtacggcattgcctccccatggtatttcccagtcctgccctcgttctgg
gcagagtgctgcggttttaacacacgcagaaaagacagtggaagagggctcctgttcacc
aacatcatgctgcagagcgggaacatcgatcacaagaacaaaggtaatgagggctttacc
tccgagggggaggctgagctggaaggcctgcctgtgggcgtgtctctccacagcctcacc
aagctctacggccaaaccatcgccatccagaacctcaacctcaacttctacgagggccat
gtgaccgcgctgctggggcacaatggagcgggcaaaaccaccaccatgtccctgctgact
gggctctacagtccctcatctggctccgtcctggtgtatgggaaggacatgcagacacac
atggatgcggtgcacagagacatgggggtgtgtatgcagtacgacgttctctttgaacac
ctcactgtcaaagagcacctcttgctgtacggacagatcaagagccctggctggaacaag
gatgaactgaaccagcaagtgcgcaacaccctgaaggagactggtatatacgcccatcgg
cacaagcgcgtgggcatgctttcgggcgggatgaagaggaagctctccatctccatcgcg
ttcatcggcggctctaagacggtggtcctggacgagcccaccacgggcgtggacccctgc
tcccggaggagcatctgggacattgtcaccagacacaaaacagggcgcaccatcatcctg
tccactcaccacctggatgaggcggaggtcctgagtgatcgcattgccttcctggagcgc
ggggggctcaagtgctgcggctcccccttctacctgaaagagaagctgggccagggctac
aacctgacactgaccaggagggtgccgccccccggctcagaagattactgtgtccctgat
accgtcactaggttcatccagtcccacttgcctgaggctcagttgaaggagaaggtgggg
gcagacctggtctacgccctgccccccttcggagcccagcgagccgatgcttaccgatcc
ctcctgagtgagctggacaggagcctggacaccctgcggctcggctgctacggcatctct
gacaccactctggaggaggtcttcctccaaatgacaaaggatgatgaaaacaaggacaca
gcctggtccaacacgcaaatggtggtccaggtcccctctgtggacactatggtctccaaa
gactccaccaccagcaataacgtcagtgatagacaagccctgactggctcctcctctctc
gggggggcccgcctcttcgcacagaaggtgatggggatgctggtgaagaggatccaccac
tcacggagggactggaagggcctgcttgcccagattatactgcccgtgctgttcgtcatc
gctgccatggggatgggcaccatcaagaatgggatccaggaatatcccgaaattaatctc
tcacctgccttgtacggatacgacggccagtctgttttctttgggcttggaaaccccagt
gccagtgatttggtctctaagatgatgtcatttcctggaatagacaacgtctgcttgtat
aaccctggtaatgagcagtgtctgaataaagaggggtctggagactggacttcaagtgga
atagctcctgcctcatacaagccatgtaactgcaatactactgttcaggtctgcccaaga
gatgattatgtaccccctcataaaaaggccacctccttacaaacagtgtacaacgtgagt
caattggacgtggaaaactacctgctctctacagcaaacagcttcatccagaacaggtat
ggcggctgggtctttggcaatcctctcccagttgatctccggatggattttgaccctgtt
ccagcaaacaggacgctgacaaaggtctggtacaaccctgaagggtaccacacgatgcca
gcctacctgaacagccttaataacttcattcttagggccaacctgccccctggtgtggat
tcacagaagtacgatatttctgtgtacagtcaaccatatacaggaggcgtcctagatgag
gatactatggttcagagtctggtgggcatgctggtcgccctctgcattctcacgggatac
tccatcatgacagccagctttgttatttatgaggtcatggagtatcagacgggtgccaag
cgtctccagcacatttctggtgttggggagatcttctattggatagtcaatttcatctat
gatatgacgctgtacctgctcccagtagccttgtccatagctgtcattgctgccttccag
ctgcccgccttcaataacagacagaacctgggggccgtgtctctactgctggtgctgttt
ggcttcggaacgttcccgtggatgtatctcctagctggtaccttcaagaacgcagagatg
gccttcatctgttacgtctccatcaacctcttcatcgccatcaacaccatcatctccacc
tcggtggtctacttcctgtctgagctgaagaaagacgacttgaacgttaaagaggtgtac
cgtgtgatgagctacgtgttcctgatcttcccgcagttcaactttgggaacggcctgatg
gagctgtcccgcgtgcagttacaggtggatattctggccgtgttcgggatcgacggctac
aagaaccccttcagcatggatgtcctcggatggatgtttgtagcgttggccatccagggc
agcctctgcttcctgctgaggctgctgctcaacacctggctgctgcgcaagatgaggatc
ttgatgtgcaggatgacagcagtgatgttccatgctgcggatgaggaccccgatgtgaag
gctgagcaggacagggtggacagcggtcaagccagcggagacctgctgcagctcaacaag
ctcagcaaactgtatcagaacatccacaagaaagtgctggcggtcaacaacatctctgtg
ggcattcctgctggagagtgcttcgggctgctgggtgtgaatggagcagggaagacaacc
acctttaagatgctgaccgccgagatcttcccctccaatggaaacgcactcgtcaaggac
acggacgggagtgtggtggacattatggacggcagcatggaagggatcaatattggctac
tgcccgcaggtggatgctctggatgatctgctgacaggagaggagcacctgtactactac
gccaggatccgcggcattcccagccaacaaattcacaatgtggtaatgcacctccttcaa
agactggagctccttcctcacaaagacaagcccacctgccaatacagctgtggcaccaag
aggaagctctccactgccctcgctctcatcggctgccctcagatcctgctgctggatgaa
ccaagctctgggatggatcccaaatccaaacgtcatctctggaacatcatttcagaggaa
ctgaaagagaagtgtgccgtggttctaacctcccacagcatggaagagtgtgaggcgctc
tgcaccagactggcaataatggtgaaaggacgattcaggtgtcttggttctctacagcac
atcaagaacagatttggaagtggcttcactgtgaaaatgcaccttgcctcgagcagcctg
ggagtggaacacatcaccacgttcatgcagtcacacttcccaagcactttcatgaagggc
caccactctggcacggtggagtaccacgtccctgtggctccggggggcgttgctgatatt
tttgaccagctggagtgcaacaaagcatctctgagcatcaaacacttttctgtgagccag
accacactggatgaggtcttcattaactttgccaaagagtcgagcgcagaggaatctgaa
gccagcagtgagctcagcggtcagtctgtgaacacatag
DBGET
integrated database retrieval system
