Acipenser ruthenus (sterlet): 117413262
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Entry
117413262 CDS
T07327
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04310
Wnt signaling pathway
arut04520
Adherens junction
arut04916
Melanogenesis
arut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117413262
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117413262
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
117413262
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117413262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117413262
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
117413262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117413262
NCBI-ProteinID:
XP_033878063
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All DBs
Position
29:4207040..4255101
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AA seq
516 aa
AA seq
DB search
MPQLNSGGGDDLGANDEMIAFKDEGEQEEKIQENALTERDLADLKSSLVNESEISQNAGA
VADHGAIRRAHAEEERAYTDKLARDHLEDLSKRQDGGMYKGPAYSGYPFLMLPDPYLQNG
PMSPSSNKVSVVQQSHGMHPLTSLLPYSNDHFNPNSPHLPADMSQKPGVHRPQSQDLSGF
YSLPPGGVGQITPPMGWQSQPVYPIAPCGFRQPYSSGLPAGSSFSRFPHSLMLGPPGMHS
TGIPHPAIVPPSGKHEHDQYDRNMYVKQHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAK
VIAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYETNL
KGGSGEKNKADWGKKKRRKREKQPDSNLDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIR
YLQGGGCASPDSSDGSAIDSPLSPTDARPHLHQTPEDLAGSADSFLREQTPFDLSANTKP
TGLSVPSSLDTRLRLPTTRQPSSSSSSVYSATITQT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttaaatagtggtggaggagatgatctgggagctaacgatgaaatgattgcc
ttcaaagatgaaggggagcaagaggaaaaaatccaagaaaacgcgttaaccgagagggac
ttggcagatcttaagtcttctttggtgaatgaatccgagatcagtcagaatgccggtgct
gtagcggaccatggggcaatccggcgtgcacatgcagaagaagagagagcctacacagac
aaacttgcccgggatcacctggaagacctgtcaaaacgtcaagatgggggaatgtataaa
ggacctgcgtattctggatatccgttcctgatgctgcctgatccgtaccttcagaatgga
cctatgtctccatcgtccaacaaagtttctgtggtgcagcagtcccatgggatgcatcca
cttacctccctcctcccctacagcaacgatcacttcaacccaaactcaccgcatctacct
gcagacatgagccagaagccaggcgttcacaggccccagtcgcaggacctctctggattc
tattccctccctccaggtggtgtgggacagatcacccctcccatgggatggcaaagtcag
cctgtttatccgatcgctccctgcggattcaggcagccgtactcctcagggctccctgcc
ggctcttccttctccaggttccctcactcactgatgctgggtcctccaggcatgcactct
acagggatccctcacccagcaatagtgcccccttcgggcaaacatgagcatgaccagtat
gacagaaacatgtatgtgaagcaacatcaggagccaaagagggagaaggagcccaagaag
ccagtgatcaagaagcccctgaatgcgttcatgctgtacatgaaggagatgcgtgccaag
gtgatagcagagtgcaccctgaaggagagcgccgctatcaaccagatcttggggagaagg
tggcatgcccttaccagagaagaacaagccaagtactatgagctggccaggaaagaaagg
cagctccacatgcagctgtacccaagctggtcagccagagacaactatgaaacgaacctt
aaagggggatcgggggaaaagaataaagcagattggggcaagaagaaaagaagaaaaaga
gagaagcagccagactccaacttagaccctggctctcctaagaaatgccgagctcgcttc
ggcctcaatcaacaaacggactggtgcggcccctgcaggaggaaaaagaagtgcattcgc
taccttcaaggaggagggtgcgccagccccgattcttccgatggaagtgctatagactct
cccctctctcccactgacgcccgccctcatctacatcaaactcccgaagaccttgctggc
tccgcagactcattcctaagagaacagacccccttcgacctttcagctaacaccaagccc
actggactctcagtaccaagttcactggacacacgacttcgcttgccaacgacacgccag
ccatcatcatcatcatcatcagtgtacagtgccactatcacacaaacatag
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