Acipenser ruthenus (sterlet): 117413316
Help
Entry
117413316 CDS
T07327
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
arut04261
Adrenergic signaling in cardiomyocytes
arut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117413316
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117413316
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117413316
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arut01009
]
117413316
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117413316
03036 Chromosome and associated proteins [BR:
arut03036
]
117413316
Protein phosphatases and associated proteins [BR:
arut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117413316
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117413316
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117413316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
117413316
NCBI-ProteinID:
XP_034764602
LinkDB
All DBs
Position
29:complement(6850839..6937988)
Genome browser
AA seq
449 aa
AA seq
DB search
MIPGFGGNAKDPQWCFAQVKGTIEVHVTEADIISTVEFNHTGELLATGDKGGRVVIFQRE
QESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKT
VKLWKISERDRRPEGYNLKDDDGRIRDPSTITTLRVPVLQPMDLMVEATPRRVFANAHTY
HINSISVNSDYATYMSADDLRINLWNLEITNRSFNIVDIKPANMEELTEVITAAEFHPNQ
CNTFVYSSSKGTIRLCDMRAMALCDKHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGR
YMMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIM
TGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKK
ILHTAWHPSENIIAVAATNNLYIFQDKVN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatccctggatttggaggcaacgcaaaggacccgcagtggtgctttgctcaggtgaaa
ggtaccattgaggtacacgtcacggaagctgacataatctccactgtcgaattcaaccac
acaggagagttgctcgcgacaggggacaagggagggcgggtggtaatattccagcgagag
caggagagtaaaaaccagcctcacagaagaggggagtacaatgtctacagtacctttcag
agccatgagccagagttcgattacctgaaaagcttggagatcgaggaaaagatcaacaaa
atcagatggcttcctcagcagaacgctgcatacttcctgctgtccacaaacgataaaaca
gtcaaactctggaagatcagtgaaagagatagaagaccggaaggttataatctcaaggat
gacgatggcagaattcgagatccttccacaatcacaacactacgggtacctgtactgcag
cccatggacctcatggttgaagccacgcccaggagagtatttgccaacgcacacacatat
cacatcaactccatatccgtcaacagcgactacgcgacctacatgtccgcagatgacttg
aggatcaatctctggaatctggaaataactaacaggagctttaatattgtcgatatcaag
cctgccaacatggaggagctgacagaggtgatcacagccgcagagttccaccccaaccag
tgcaacaccttcgtctacagcagcagcaagggcaccatccggctgtgcgacatgagagcg
atggcgctgtgcgacaagcacgccaaattctttgaagaaccagaggaccccagtaataga
tcctttttctctgaaataatctcctcgatttccgacgtcaagttcagtcacagcgggagg
tacatgatgacccgggattacctcacagtcaaggtctgggacctaaacatggagaacaga
cctatagagacataccaggtgcatgattatctaaggagcaagctgtgttcactctatgaa
aacgactgcatatttgataaattcgaatgtgtctggaatggatctgacagcgttataatg
accggctcctataacaatttcttccgaatgtttgatcgcaataccaaacgggacgtgact
ctggaggcttcaagagagaacagcaagccgagagccatcctgaaacctcgcaaagtgtgc
gtgggagggaagagaaggaaggacgagatcagcgtggacagcctggacttcagcaagaag
atcctgcacaccgcgtggcacccttcagagaacattatagccgtggccgccactaacaac
ctctatatattccaggacaaagtgaactag
DBGET
integrated database retrieval system
