Acipenser ruthenus (sterlet): 117413382
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Entry
117413382 CDS
T07327
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117413382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117413382
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117413382
Spliceosome [BR:
arut03041
]
Complex A
U2 snRNP components
U2 related factors
117413382
Complex B
117413382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
117413382
NCBI-ProteinID:
XP_034764633
LinkDB
All DBs
Position
29:80462..96694
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AA seq
1062 aa
AA seq
DB search
MKKKQLKNPALRHYRKRSASRGRSGSRSPEKRVKRDERVRSRSRERERRRERSHSRERRR
SRSRERKRVRRSRSRERRRSRSRDRRGRRSRSTSPSKSRKTDDGSKSKEKNDSAEPSAEK
KKIKEEKEDEKDEAVFEVRTKDATTERQPDESFDQNKLEEEMRKRKERVEKWREEQRKKA
MENIGELKRELEEMKQGKKWSLEDDEDDDEDGVAVAPEEEAEAEAEEEVEAEAESMEAVD
DEQDTLDAYMEEVKEEVKKFNMGSMKGANDKKSGTTVTKVMTVLTTKKASSDSEKKKGEL
MENDQDAMEYSSEEEEVDLQTALTGYQSKQRKLLEPVDHQKIEYEPYRKNFYVEVPELAR
MSPEDVHVYRLELEGITVKGKGCPKPIKTWVQCGISMKILSALKKQNYDKPTPIQAQAIP
AIMCGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEAEGPIAVIMTPTRELALQITKE
CKKCSRPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVT
YVVIDEADRMFDMGFEPQVMRIVDNIRPDRQTVMFSATFPRAMEALARRILSKPVEVQVG
GRSIVCSDVEQHVIVLEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMKASY
PCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKHLILVINYNCPNHYEDYV
HRAGRTGRAGNKGFVYTFITEDQARYAVDIIKALELSGAAVPPQLEQLWNNFKDQQKAEG
KSIKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIDEQIESMFNSK
KRVKDMAAPGGGGGGGANAPAGGGGGPSMLVPSAGNAEKLEIAKKLALKINAQKNLGSEA
LDVMQQATNAVLRGGTIQPQSVSAKTIAEQLAEKINAKLNYIPVEKQEEEKQESAQNETL
KRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLA
IESANELAVQKAKAEISRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaagcagttgaaaaacccagcattgaggcactaccggaagcgctcggcctcg
aggggccggtcggggagccgctctccagagaagcgtgtgaagcgtgatgagcgcgtccgc
tccaggagcagagagcgagagcgcaggagagagaggagtcacagcagagagaggaggaga
tcccggtccagggagaggaagcgtgtcagacgctctcgcagccgggagaggaggcgctct
cgcagtcgggaccgcaggggtcggaggtcacgctccaccagccccagcaagagcaggaag
actgatgacggatcaaaatccaaggagaaaaatgacagcgcagagccttctgctgaaaag
aagaaaataaaagaggaaaaagaggacgaaaaggatgaagctgtgtttgaagttaggaca
aaggatgcgacgacagaacgtcagcctgatgagagctttgaccagaataagctggaggag
gagatgaggaaaaggaaagagcgagtggagaaatggagagaagagcagcggaagaaagca
atggaaaacatcggggagctgaagagggagctggaggagatgaagcagggaaagaagtgg
agtcttgaggatgacgaagatgatgatgaggatggggtggcagtggctccagaggaagag
gcagaggcagaggcagaagaagaggtagaggcagaggcagaaagcatggaggctgtggat
gatgagcaggacacgctagacgcctacatggaggaggtgaaggaggaggtgaagaagttc
aacatgggcagcatgaagggtgcaaacgacaagaagagtggtacaacagtaaccaaagtg
atgactgtattaacgaccaaaaaagcatcttctgattctgagaagaagaaaggggagctg
atggagaacgaccaggatgcaatggagtactcctctgaagaggaggaggttgatcttcag
actgcactcactgggtatcagtcgaaacagaggaagctgctggaacctgtggaccatcag
aagatcgagtatgagccgtaccgcaagaacttctatgtcgaggttcctgagctggctaga
atgagtccggaagacgtccatgtctaccggttggaattggaaggaattacagtgaagggt
aaaggctgccccaaaccaatcaagacctgggtgcagtgtggcatctccatgaagatttta
agcgctcttaaaaaacaaaactatgacaaaccgacaccgatccaagcccaggccattcct
gccatcatgtgtggcagggatctgattgggattgctaaaactggcagtggcaagaccatc
gccttcctgctgcccatgttccgacacatcatggaccagagacctttggaggaggcggag
ggtccgattgctgtcatcatgaccccgactcgagaactggcccttcagattactaaagag
tgcaagaagtgctccaggcctctgggtctcagggtggtgtgtgtgtacggaggcacagga
atcagtgaacagattgcagagctgaagagaggagctgagatcattgtgtgcacgcccggg
cgcatgattgacatgttgggagccaataatggtcgagtcacaaacctgcgcagagtcacc
tacgttgtgatagatgaagctgacaggatgtttgacatgggttttgaaccgcaggtcatg
cgcattgtcgacaacatccgtcccgaccggcagacagtgatgttctcagccacgttcccc
agagccatggaggccctcgctcggaggatattatccaaacctgtggaggtgcaagtggga
ggcagaagcattgtgtgctcggatgtggagcagcatgtgattgtccttgaggaagagaac
aagttcctgaagctgctggagctgctgggtcactaccaggagaagggctctgttataata
tttgtagacaaacaggagcacgcggatgggctgctgaaggatctgatgaaggcctcgtac
ccttgcatgtcccttcatggaggcatcgaccagtatgaccgagatagcattataaatgac
tttaagaatggagcctgtcggctgcttgtggcaacctcggtcgctgccagagggctggat
gtcaagcacctgatcctggtgatcaactacaactgccccaatcactatgaggattatgtg
caccgagccggccgcactgggagagcagggaataaagggtttgtctacacctttattacg
gaggaccaagctcgctacgctgtggatattataaaggctctggagctgtcgggagccgct
gttcctccacaactggagcagctgtggaacaacttcaaggatcaacagaaagctgaggga
aagagcatcaagagcagcagcggcttctctgggaagggcttcaagttcgacgagacggag
cacgctctggccaacgagaggaagaagctgcagaaagctgcgctggggctgcaggactcc
gacgacgaggacggtgctttagatattgatgagcagatcgagagtatgttcaactcgaag
aagagggtgaaggacatggccgcaccaggggggggtggaggagggggggccaacgctcct
gctggcggcgggggggggcccagcatgctggtgccctctgctggcaacgctgagaaactg
gagatcgccaagaaactggcactgaagatcaacgcccagaagaacctgggttcagaagca
ctggatgtgatgcagcaagcaacaaatgcggttctgcgcggaggcaccattcagccacag
tctgtctctgcaaagaccatcgcggagcagctggctgagaagatcaacgccaagctgaac
tacatccctgtggagaagcaggaggaggagaaacaggagagcgcgcagaacgagaccctc
aagagatacgaggaggagctggagatcaacgacttcccccagactgcccgctggaaggtc
acctccaaagaggcattgcagaggatcggcgagtattcagaggctgccattaccatccga
gggacttacttcccaccaggcaaggagccgaaggaaggagagcgcaagatctatctggcc
atcgaaagtgcaaacgagctggccgtgcagaaagctaaagcagagatctccaggcttatt
aaagaagagctcatcagactgcaaaactcttaccagccgaccagcaagggaagatacaaa
gttttgtag
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integrated database retrieval system
