Acipenser ruthenus (sterlet): 117413431
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Entry
117413431 CDS
T07327
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04140
Autophagy - animal
arut04148
Efferocytosis
arut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117413431
04148 Efferocytosis
117413431
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117413431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117413431
Membrane trafficking [BR:
arut04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117413431
Hops complex
117413431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Mad3_BUB1_I
DUF740
Motif
Other DBs
NCBI-GeneID:
117413431
NCBI-ProteinID:
XP_033878506
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All DBs
Position
10:45534281..45550715
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AA seq
837 aa
AA seq
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MAFVTANWNPLGEAFYRKIELYEMGWNLREGLRDCLIAAAPYGGPIALLKESQRRERSAS
ARPLLEIYSAAGVPMASFPWKSGVVVHISWTVSDDLLCIQEDGTVLIYDMFGNFRRHFSM
GNEVLQNQVIEAKVFHSAYGTGVAIVTGAFRFTLATNIDDLKLRRLPEVPGLQVAPSCWA
VLTQDRQTKVVLASGKDLYVLDNTACTPVTPPGIDPQVSSYFQMAASFSYKYLALFTDTG
HVWMGTSNLKEKLSEFDTKVRSPPKQMVWCRRPKSQQPAVVLMWDRLLLVAGKCRESIKY
HLDEESFLVPELDGVRIVSRSFHEFLHEVPGACEEIFKIASMAPGALLLEAHKEYEKESQ
KADEYLREIKEQNLLPEAVRQCVEAAGFEHEPETQKILLRASSFGKCFLSNFPPEQFVGM
CLDLRVLNAVRDYSVGIPLTYAQYKQMTVQVLIDRLVFRRLYPLAIEICRYLKIPEFQGV
SRVLKHWACFKVQQKEEPDDVIACAINQKLGDTASISYSEIAARAYECGRTELAIKLLEF
EPRSGEQVPLLLKMKRSQLALSKAIESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVAL
SLYRQFCKHQEQNTLKDLFNQDDDHQELGNFYVRASYGEGSVEARMAALQNAVDEFNKAK
NEFSAKATEEQMKLLRWQRRFQEEFDKPYLDCSLHETVHSLLLDSKHKQAEQLYKDFRIP
DKRFWWLKISALAEKEDWEELEKFSKSKKSPIGYLPFVEICVKHHNKYEAKKYVTKVTLE
QKVKAHLAVGDLEQAVEAAIERRSESELNLVLSRCTPTTDRALLDKINSARAGALKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgtgacagcaaactggaacccgctgggggaagcgttttacaggaagatcgag
ctgtatgagatgggatggaacctcagagaggggctgagggactgcctcatagcagccgcc
ccgtatggggggcctatagccctgctgaaggagagtcagagacgggagcgctctgccagt
gccaggcccctgcttgagatctactcagctgctggagtgcccatggccagcttcccgtgg
aagagtggtgtggtggtgcacattagctggacagtcagtgatgacctgctgtgcattcag
gaggacggcaccgtgctgatctacgacatgttcggcaacttccgccggcacttcagcatg
ggcaatgaagtgctgcagaatcaagtgattgaagccaaggtgttccactctgcctatgga
accggggttgccatagtgaccggagcattccggttcaccctggctaccaacattgacgac
ctaaagctgcgccgcctgccagaggtcccaggcctgcaggtggcaccctcatgctgggcc
gtgctgacgcaggacagacaaaccaaggtggtactggccagcgggaaagacctgtacgtg
ctggacaacacggcttgcactccagtgacccccccagggatagacccccaggttagcagc
tacttccagatggcagcgtctttcagctacaagtacctggcactgttcacagacaccggt
cacgtgtggatgggcacctccaacctcaaggagaagctcagtgaattcgacaccaaagtc
cgcagccctccgaagcagatggtgtggtgccgcagacccaagagccagcagcccgccgtg
gttctgatgtgggacagactgctcctggtggctgggaagtgcagagagagcatcaagtat
cacctggatgaggaatccttcctggtcccagagctggacggggttcgaattgtgagtcgc
agcttccacgagttcctgcacgaggtgccaggtgcctgtgaggagatcttcaagatcgct
tcgatggctccgggggctctcctgctggaggcacacaaagagtacgagaaggagagtcag
aaggcagacgagtacctgcgggaaatcaaagagcagaacctccttcccgaggcagtgagg
cagtgtgtggaggcagccggctttgagcacgagcccgaaacacagaaaatcctgctcagg
gcctcgtcctttgggaagtgctttctcagtaacttcccccccgagcagtttgtggggatg
tgtctggacctgcgagtcctcaatgcggttcgagactacagcgtggggatcccactcacc
tacgcacaatacaaacagatgactgtgcaggtgctgattgacaggctggtgttccgccgg
ctctacccgctcgccatcgagatctgccgctacctgaaaatccctgagttccagggggtg
agcagggtgctgaaacactgggcctgcttcaaggtacagcagaaggaggagcctgatgat
gtcatagcttgcgctatcaaccagaagctgggcgacacggcgagcatctcgtactctgag
atcgcggcgagggcatacgagtgtggcaggactgagctggccatcaagctcctggagttt
gaaccccggtcaggagagcaggtgcctctgctgctgaagatgaagagaagccagctggcc
ctgagcaaagccatcgagagcggggacactgacctggtgtacactgtggtgacctacctg
aagaatgagatgaaccgtggggatttcttcatgactctgcggaaccagccagtcgcactc
agcctctacagacagttctgtaagcaccaggagcagaacacgctgaaggacctcttcaac
caggacgatgatcaccaggaactgggcaacttctacgtgcgagccagctacggggagggg
agtgtcgaggctcggatggcagcgttgcagaacgccgtggacgagtttaacaaagccaag
aacgagttctctgccaaggctacggaggagcagatgaaactgctgcggtggcagcgtcgc
ttccaggaggagtttgacaagccctacctggactgctccctccacgagaccgtgcactcg
ctgctgctggacagcaagcacaagcaggcagagcagctgtacaaggacttccgcatcccg
gacaagaggttctggtggttgaagatctctgctctggccgagaaggaggactgggaggag
ctggagaagttctccaagagtaagaagtctccgatcgggtatctgccttttgtagagatc
tgtgtaaagcatcacaacaagtacgaagctaagaaatacgtgaccaaagtgaccctggag
cagaaagtgaaggctcatctagcggtgggggatctggagcaggcggtggaggctgcgatt
gagaggaggagtgagagtgaactgaacctggtcctatcacgatgcacccccaccaccgac
cgggccctgctggacaaaatcaacagcgcacgggctggagcgctcaagaaataa
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