Acipenser ruthenus (sterlet): 117413434
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Entry
117413434 CDS
T07327
Name
(RefSeq) matrin-3-like isoform X1
KO
K13213
matrin 3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117413434
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117413434
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
117413434
NCBI-ProteinID:
XP_033878513
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All DBs
Position
29:3385268..3399164
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AA seq
1174 aa
AA seq
DB search
MTDQSSDKVDSFDLGTSSDASMQGQDACGSQSHRNVDKAMNLFTTLGLSPEDLDSLTHIP
EDQLTVETLPKIIMQLKAQRAKERGTASKRSRDDRSSSREQPNRAASKPSGVGKYGQLRK
GSSRSYERLDYDEGKGGGSDRYPEPSRGHHESEYDRRGPAPVPERSFMERRTGSPSLSKI
EDYHGILPKTFPHVCTLCDFDVHSVKSWSRHIDGSLHAHSQQLLLDQYPEWIPKSMPSRD
RQDPLEEEATSGEDGFIDTSPVGHQQRGVSSDWSKGGGISSQDKRGYSMKAQGGGKVVVA
KYLNGTCYLEDLLELAEPFGTVANHLVVVNKTFLEMLTPEEAASMVKYYQRTTPMVRGHA
VQVYLSSAIKTIQTHGRVRAPTQSQDSGYAVVYICNLPPDFKDSELIELAKQFGPVWNSL
ILKHEAFVEMVNPRDAEMMVKYYTIHPPKLNGKKIKIITCKKYRRLKVKPGTASHRGKDS
SSSSSSGGSSRRTNETPRRSKRSRSRERASTAKEEGGSSGKEEQEEPGDQGSEVMDMESN
ASEEEEGVELGEEEDPEEPDPFLDCTETQGEEPKEQSQESSETQEEGQVEASLETSATQG
EQAEKDCLESLETQVEQPAEKSLESLETQEEEPAEKPPEGPGTQGVEPPAKAPESLETQE
LETADTSLERSETQREAPGEEDSQPADEKAAEASFPEEEEGTPEFPDNLEDLVTLDEVGD
EEEAEMTRLDLETAASSSSSAQKEKEGLKMVNVSFSKKGYNLVKEILRLAEPFGKVVFYK
ILEQRNEAILEMSTMEEARQMVDFYKIKPAMLYRASVKITLLKNFHGGRVVYFHQLPSSY
FPIRSLLKLARRFGKVKYYVLIWVRNEAFIEMETSRSALEMCREYKKNPPTLNGKMLSVY
LSWKDKLMKGRRVPSCSPSPEPPKRSKRERPERSKREDETSSSSKSRTKEREEEEGPPQK
RGRSQETGEQGESPVKTREGEQKQTKDKVLLDKEAAGSQQEKETAEEPSLSEGEAGVPFT
TDVEVSDEAGLPEGLGAGASASNKVSSQAPHKQGDKSESTEETLPMTVETEPMETEIVNK
GGACDSANEQHTGTDEKTVHSIKPEPTPTTLGPYQPNNPVGVEHVKAGFYCSLCSLFYTS
EEAAKVTHCSSLAHYQKLQEMLNKENTAAERSSS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccagagcagcgacaaggtggacagctttgatcttggaacaagttcagacgca
agcatgcaaggccaggatgcctgtggttcacaaagtcacagaaatgtagacaaggccatg
aaccttttcaccaccctcggcctctcgccagaagacttggattcgctgacgcacattcct
gaggatcagctcaccgtggagacgctgccgaagattatcatgcagctgaaggcgcagaga
gccaaggaacggggcaccgcatcgaagcgctctagggatgatcgctcctcttcacgagaa
caaccgaacagagccgccagtaagccttccggcgtcgggaaatatgggcagctaagaaag
ggttcctctcgcagctacgagaggcttgactacgatgaggggaaaggaggaggcagtgac
cggtatcctgaaccgtcccgtggtcaccatgagtcagaatacgacaggaggggccccgct
cctgtgcctgaaagatcatttatggagaggaggacagggtccccgtctctcagcaagatt
gaggattaccatggaattctgcccaagacctttccacatgtgtgcaccctttgcgacttt
gatgtgcattctgtcaagtcctggagtcgtcatatcgacgggtcactacatgcacatagt
cagcagctcctcctggaccagtatccagaatggattcccaagagtatgccgagcagagac
aggcaggatcctcttgaggaggaagctaccagtggagaagatgggttcattgataccagt
ccagttgggcatcagcagagaggagtaagctctgattggagtaagggtggagggatttca
agccaagataagagagggtattccatgaaagcacaaggaggaggaaaagtggtggttgca
aagtatctgaatggcacgtgttacctggaggatctgctggagctggcggagccttttgga
actgtagctaatcacctggtggtagtgaacaagaccttcctggaaatgctgacacctgaa
gaagcagcttctatggtgaaatactaccagcgtacaacccccatggtccgtggccacgca
gtccaggtgtatttgtcttctgcaattaaaactattcagacacatgggcgcgtccgagcc
ccaacgcaaagccaggactctggctatgcagtggtctatatctgtaacctgcctcctgat
tttaaagactctgagttgatagaattggctaagcagtttggtcctgtgtggaactctcta
attttaaagcacgaggcgtttgtggaaatggtaaaccctagggatgcagagatgatggtg
aagtattatacaatacatcctccaaaactgaatggcaaaaaaatcaagataatcacttgc
aagaagtacaggagactcaaggtgaaacctggcaccgcttcacatagagggaaggatagc
agcagcagcagcagcagcggtggcagcagcaggcggacgaatgaaacacccagaagaagc
aagcggtccagatccagggagagagcttccacagccaaagaggagggggggtcctcgggg
aaggaggaacaggaggagcctggagaccagggatcagaggtgatggatatggagagcaat
gcctcggaggaggaggagggggtggagcttggggaagaggaagatccagaggagcctgac
ccatttctggactgtactgaaacccaaggggaggaaccaaaggaacaatcccaggagagt
tcagagacccaggaagaagggcaagtggaggcgtccttggaaacttcagcaacccaaggg
gagcaagcagaaaaggactgcctggaaagtttagaaacccaagtggagcagccggcagaa
aaatcccttgaaagtttagaaactcaggaggaggaaccggcagaaaaacctccagaaggt
ccaggaacccaaggagtagaaccgccagctaaagccccagagagtttggagactcaggaa
ttggaaacggcagatacatctctggagagatccgagacccaaagggaggccccaggggag
gaagacagtcagccagcagacgagaaggcagcggaggccagttttcctgaggaggaggaa
ggaaccccagagttccctgataacttggaggatttggttactttagatgaggtgggagac
gaggaggaggcggaaatgacaaggctggatttggaaacggctgcttcgtcttccagtagt
gcacaaaaagagaaagaggggttgaagatggtcaatgttagtttctctaagaaaggttac
aacttggtcaaggaaattctccgcctggctgaaccatttgggaaagtggtgttctacaaa
atattggaacaaaggaatgaggcaattttagaaatgtcaacaatggaggaagcgagacaa
atggtggatttctacaaaatcaagccagctatgctttatagagccagtgttaaaatcact
ttgttaaaaaattttcatggcgggcgagtcgtctacttccaccagctgccttcctcgtac
tttccaattcgctctctcttaaagcttgccagacggtttgggaaagtgaagtactatgtg
ttgatctgggtccgcaacgaggcttttattgaaatggaaacctctcgctctgccttggaa
atgtgccgggagtacaagaagaaccctccaactttaaacggcaaaatgttgtcggtttac
ctgtcctggaaggacaaactcatgaaagggaggagagtaccttcctgttccccttcacct
gaacctcctaaaagatccaagagggagcggccggagaggagcaagagagaggatgagacg
tccagcagctctaaatccagaaccaaagaaagggaggaggaggaggggcccccgcagaaa
aggggccgcagccaggagacaggggaacaaggagagtctccggtgaagaccagggagggg
gagcagaaacaaaccaaggacaaggtgctgttggataaggaggctgcaggcagccaacaa
gaaaaagagacagctgaggagcccagcctcagtgaaggggaggctggcgttccattcaca
acagatgttgaagtaagtgatgaagcaggtcttccagagggtctaggagctggggcttct
gcatctaacaaagtaagcagccaggcccctcataaacaaggggataagagtgaaagcaca
gaagagaccttgccgatgacagttgaaacggagcccatggagactgagattgttaataaa
ggaggtgcatgtgactctgcgaatgagcagcacactggtactgatgagaagactgtgcac
agcatcaagcctgagcccacacctaccaccctgggaccataccagccgaataatcccgtc
ggtgtggagcatgtgaaggctggtttctattgcagtctctgcagcctgttctacaccagt
gaagaagcagcaaaagtcacccactgcagcagcctggcccattatcagaaactgcaggaa
atgttaaataaagagaatacagcagcagaaagatcgtcaagctga
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integrated database retrieval system
