Acipenser ruthenus (sterlet): 117413441
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Entry
117413441 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117413441
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117413441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
UBA_N4BP1
RuvA_C
Motif
Other DBs
NCBI-GeneID:
117413441
NCBI-ProteinID:
XP_033878533
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All DBs
Position
29:15983718..15993671
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AA seq
716 aa
AA seq
DB search
MNLDSIQYKPNPAEDFPSWSGKPLARTLKSADTCPSLWNTDFKELSLSDEPSMNNLAVPA
RSQKGAHMNDRVNRDHCQSPREGQGCVDAALLDPNELQMQVDFFCKLGYSPDEIRAVLQK
LGLNADTNTVLGELVRSGVTASEREMVPTNPPGPAVVSQGENSPTMPGTPPPPQEDEKDE
GSLLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNYFIDRGHTDITVFVPSWRKEQPRPDV
PITDQHILRELEKKKIMVFTPSRRVGGKRVVCYDDRFIVKLACESDGIIVSNDTYRDLQS
ERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLVQEQKRQHCPYGKK
CTYGIKCKFYHPERINQSQRSVADELRANAKLSTTRAMSHSSPLKDEKKPILSRKSSQPD
MLSMASLEQEMEQKLMLERRNALQKVHITENSLLVKGATLSKRPSKKVAFNQCSHHSPTK
IDSFPAXSQEPLDSGLGSYESQYSEMMPRGPQGHCEHYHPEQRGSGRYSNCSNSRPVYQH
SQSLDQHDSYQQYNCSQKPMTAGASFHQYNPELPNSRSSNVMGHGGHCYPGYGRPVYQGV
VGPYSLPDDYNPGSVHPQREYWSDPFQVAAHGRSSSLQDHQRFQQHLPSTVYNGQQSHQW
PQQDPYTKEREDVRKKLLAIFNPHQVDKAMSMFPNLFNPQSLAAEILKLKSRGELM
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagacagcattcaatacaagccaaaccctgcagaggatttccccagttggtct
ggaaagcctctagcccgaacattgaaatctgctgatacttgtccttccttatggaacaca
gacttcaaagaactctctttaagtgatgagccaagcatgaacaaccttgctgtcccagcc
agatctcagaaaggagcacacatgaatgatagggtgaacagagaccactgccagtctccc
agagaggggcaggggtgtgtggatgcagcgctgctagatcctaacgagcttcagatgcag
gtggattttttctgtaaactcggctactccccagatgagatcagagctgtactccagaaa
ctgggcttgaatgcagacacgaacactgtgttgggggagctggtccggtctggggtcaca
gcctccgaaagggagatggtcccaacaaaccctccaggacctgcagtggtgtcccaaggg
gagaattctccaaccatgccaggtacaccgccccccccacaagaggatgaaaaggacgag
ggaagtcttttaagaccggtggttattgatgggagcaacgtggctatgagccatgggaat
aaggaggtcttttcctgccgtgggatcctgctagctgtaaactattttatagaccgggga
cacactgatatcacagtctttgtaccatcatggagaaaggaacaacctaggccagatgtc
cccatcactgaccagcatattctcagagaacttgagaagaagaagatcatggtgttcacg
ccatcgcgacgggtcggtgggaagcgggtcgtctgttatgacgatcgattcattgtcaag
ctggcctgcgaatccgatggcatcatcgtgtcaaacgacacctatagagacttgcagagc
gaacgccaagaatggaagcgattcattgaggagcgcctgctgatgtattcatttgtcaat
gacaagtttatgcctcccgatgatccacttggacggcatggtcctagcctggataatttt
ctgaggaagaaaccacttgtacaagaacaaaaacgacaacactgcccctacggcaaaaaa
tgcacttatggaatcaagtgtaaattctaccacccagagcggattaaccagtcacagaga
tctgtggctgatgagctccgggcgaacgctaagctttctacaaccagggctatgagtcac
tctagccctctgaaggatgagaagaagccaatcttgtcaaggaaatcctcccaacctgat
atgctctcgatggcatccctggagcaggaaatggaacagaagttgatgctggagcgaaga
aacgctctgcagaaagtgcacatcactgagaattcactcctggtaaaaggggctacttta
tccaagaggccttccaaaaaggtggcttttaaccagtgcagccaccattccccaacaaaa
attgactctttccctgccncttcacaagaacctttggattcaggcctgggatcctacgag
agccagtattctgaaatgatgcccaggggaccacagggacactgtgagcattaccatcca
gagcaaaggggatctggcaggtacagcaactgttccaatagtcggcccgtttaccagcac
tctcagagcctggatcagcatgacagctatcagcagtacaactgttctcaaaaaccaatg
actgccggagctagcttccatcaatataacccagagctaccaaactccaggtcatctaac
gtgatgggtcacgggggacattgctatccagggtacgggaggccagtgtaccagggtgtg
gtgggtccttacagccttccagatgactacaacccaggctctgtgcacccccagcgggaa
tactggtcagatccgtttcaagtggctgctcatggcagatcaagcagcctacaggatcac
caaaggttccagcagcatttaccaagcacagtgtacaatggtcagcaatcgcaccagtgg
ccccagcaagatccctataccaaagaacgggaggatgtccgtaaaaagttgctggccatc
tttaacccccatcaggtggacaaggccatgagcatgttcccaaacctgttcaacccccag
agccttgctgctgaaatcctcaagctcaagtcaaggggcgagctgatgtaa
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