Acipenser ruthenus (sterlet): 117413749
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Entry
117413749 CDS
T07327
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03082
ATP-dependent chromatin remodeling
arut03083
Polycomb repressive complex
arut04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117413749
03083 Polycomb repressive complex
117413749
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117413749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117413749
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
117413749
Histone modification proteins
HAT complexes
HATB complex
117413749
HDAC complexes
Sin3A-HDAC complex
117413749
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117413749
PRC2.2
117413749
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
117413749
Heterochromatin formation proteins
Other heterochromatin formation proteins
117413749
Chromatin remodeling factors
NuRD complex
117413749
NuRF complex
117413749
NuRF complex (fruit fly)
117413749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_1st
MIOS_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
117413749
NCBI-ProteinID:
XP_034764294
LinkDB
All DBs
Position
29:complement(14240416..14248097)
Genome browser
AA seq
464 aa
AA seq
DB search
MCSLTGRETKNNRLRFIFQRLFFFTRSYGSYSLIYAAMADKEAAFDDAVEERVINEEYKI
WKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSDEQNHLVIAS
VQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATK
TPTSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGYLLSASDDHVRK
TICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSN
NTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI
FQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDF
SWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADAEVQG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctctgactggacgagagacaaagaacaaccggttgcgttttatatttcaacgt
ctttttttttttacacgtagttacggctcatatagcctgatatacgcagctatggcggac
aaagaagcagcgtttgacgatgcggtggaggagcgtgttattaacgaggagtacaagatc
tggaagaagaacaccccctttctgtatgacctggtgatgacacacgctctggagtggccc
agtcttacggcacagtggttaccagatgtcaccaggcctgaagggaaggacttcagcgtt
cacaggttggtgctcggcactcacacctctgatgaacaaaaccaccttgtcatcgccagc
gttcaactgcccaacgatgatgcccagtttgatgcttctcattatgacagcgagaaagga
gagttcggtggatttggatcagtcagcgggaagattgaaatagaaatcaaaatcaaccac
gagggggaagtgaaccgggcccgctacatgccacagaacccgtgcatcatcgctacgaaa
accccaaccagtgatgtgctggtgttcgactacacaaagcacccctcaaaaccagatccc
tcaggcgagtgcaatccagatctgcgtttacgagggcatcagaaagaagggtatggtctg
tcctggaaccccaacctcagcggctacctgctgagcgcgtcggacgatcatgtaaggaaa
acgatctgtctgtgggatatcagcgctgtcccgaaggaggggaaagtggtggatgcgaag
acaatcttcaccggacacacagcggtggtggaggacgtgtcgtggcatctgctgcacgag
tctctctttggatcagtcgctgatgatcagaaactcatgatctgggacaccaggtctaac
aatacatcaaaaccaagccatgctgtcgacgcccacactgccgaagtgaactgcctgtcc
tttaacccctacagtgaatttattctggcaacaggctctgcggacaagactgttgcactt
tgggatttgcgtaacttaaaactgaagttacactcgtttgagtctcacaaagacgaaatc
ttccaggttcagtggtctcctcataatgaaactattctggcatccagtggaactgacagg
cggctcaatgtctgggatttgagtaaaattggcgaggaacaatcacctgaagatgcagag
gatggacccccagagttgctgtttatccatggtggacacacggccaagatttctgatttc
tcatggaaccccaatgaaccttgggtgatatgctctgtatcagaggacaacatcatgcaa
gtctggcaaatggctgagaacatttacaatgacgaagaccctgaaggagctgcagatgca
gaagtacaaggctga
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