KEGG   Acipenser ruthenus (sterlet): 117413759
Entry
117413759         CDS       T07327                                 
Name
(RefSeq) probable histone deacetylase 1-B
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03082  ATP-dependent chromatin remodeling
arut03083  Polycomb repressive complex
arut04110  Cell cycle
arut04330  Notch signaling pathway
arut04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117413759
   03083 Polycomb repressive complex
    117413759
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    117413759
   04350 TGF-beta signaling pathway
    117413759
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117413759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:arut03036]
    117413759
Enzymes [BR:arut01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     117413759
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     117413759
   HDAC complexes
    Sin3A-HDAC complex
     117413759
    BRAF-HDAC complex
     117413759
    REST complex
     117413759
    SHIP complex
     117413759
    MiDAC complex
     117413759
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     117413759
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117413759
  Chromatin remodeling factors
   NuRD complex
    117413759
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 117413759
NCBI-ProteinID: XP_034762068
LinkDB
Position
25:complement(11902253..11909823)
AA seq 481 aa
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
AAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAVLELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMSKVMEMYQPSAILLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAIQGDSGEEDEEDPDKRISIRAHDKRIACDEE
FSDSEDEGEGGRRNVANYKKAKRVKTEEEKDGEEKKDVKEEEKAKEEKTEAKVAKEDAKT
S
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcgctgacttctcaaggaacaaagaagaaagtttgttattattatgatggggacgtt
gggaactactactatggacaagggcatccaatgaagccccacagaattcgtatgacccac
aacctgctgctcaactacggactgtatagaaagatggaaatttatcggccacacaaggca
aacgcagaggaaatgacaaagtaccacagcgatgactatataaagttcctgaggtctatc
cgacctgacaacatgtccgagtacagcaagcagatgcagagatttaatgtaggagaagat
tgtcctgtatttgatggtctgtttgaattctgccagctgtccactggtggatcagtagcc
gcagcagtaaagctaaacaaacagcagacagacattgctgtcaactgggctggaggtctg
catcacgccaagaaatcggaagcctctggattttgctacgttaatgacattgttttagct
gtccttgagctgttgaaataccatcagagagtcttgtacattgacattgatatccaccat
ggagacggtgtagaagaagctttctatacaacagaccgtgtcatgactgtatcgttccat
aagtatggagagtacttcccaggaaccggagacctcagagatattggagcaggcaagggc
aagtactatgctgtgaactacccactcagggatggaatagatgacgaatcctatgaagcc
atattcaaaccaatcatgtctaaggtgatggagatgtaccagcctagtgccattctgcta
cagtgtggcgctgactcgctatccggagacagactgggctgcttcaacttgaccatcaaa
gggcatgccaagtgtgtggaatacatgaagagctttaacctgcccttgctgatgctggga
ggaggaggctacactattcgcaatgtggccaggtgttggacatatgaaaccgctgtagct
ctggacactgaaattccaaatgagctgccatataatgactacttcgaatactttggtcct
gattttaaactccacatcagcccttcaaacatgacaaaccaaaatactaatgattatctg
gagaagatcaagcagcgtctgtttgagaacctgcgcatgctgccccatgcccctggggta
cagatgcaggccatcccagaagacgccattcagggggacagcggcgaggaggacgaggag
gacccagacaagcgcatctccattcgtgcccatgataagaggatagcctgtgatgaagag
ttctctgactccgaggatgaaggggaaggaggacgcaggaatgttgctaattacaagaag
gccaagcgtgtcaagactgaggaggagaaggacggcgaggagaaaaaagatgtaaaagag
gaggaaaaggcaaaagaagagaaaacagaagcaaaggtggcaaaagaagatgcaaagacg
tcctag

DBGET integrated database retrieval system