Acipenser ruthenus (sterlet): 117413871
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Entry
117413871 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117413871
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117413871
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117413871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-C3HC4_4
zf-RING_Vps41
RING_XB3-XBAT31
zf-RING-like
zf-RING_16
zf_RING_Vps8
Zn_ribbon_8
RNase_Y_N
RINGv
WEMBL
zf-Nse
Crescentin
Gp58
MAD
SLX1_C
zf_RING_Vps8_fungal
DUF745
Prok-RING_1
MscS_porin
Motif
Other DBs
NCBI-GeneID:
117413871
NCBI-ProteinID:
XP_034762168
LinkDB
All DBs
Position
25:20427070..20436183
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AA seq
459 aa
AA seq
DB search
MPIRAYCTICSDYFDNSKDVAAIHCGHTFHYECLLQWFQTAPSKTCPQCRKQVSPRHIIS
KLFFDQVLEEGAPTLDPESLQNELDRIRVLLSTKESEWRESQKIIDSLRETVNQRNTTLE
SLKRSLEEKEMLCSALRKQMKYLENQQNETKSAKEETRRLRTKMKTFESLDLLLQGQRGE
VEAMIRDMGVGQSAVEQLSIYCVSLKKEYENLKTNHRTSNEMTEKLKRELFSSNSKLDKA
VLELNRTKDDLKAAQQELVNADKQITSLKKKVEFLQKTLSTPSRTNEAISRLVFESPAPV
QLKQPCLRQPMNSEDIDLNMTFDISTPEDLNKKPVAAPSKKIRLEATQSASSQPVKYSIE
NKSAKGKEAEEDIVLAPFLSNSLLFRKNTFGSLLDPQRGKGGTIRTGFDGLGGRTKFIQP
SPLADISPPVRKVKRKKVTRPLNGMLSTNLQKLDGFLQL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccgattcgtgcatactgcaccatctgctcagattatttcgataactcgaaagatgtg
gctgctatacactgcgggcacacctttcattatgaatgtcttcttcagtggttccagaca
gctccctccaaaacctgtccacagtgcaggaaacaggtcagccctagacacatcataagc
aagctgttctttgatcaagtattggaagagggggcccccactctggacccagagagccta
cagaatgaattggacaggatccgggtgctgctcagcacaaaagagtcagagtggagggaa
agccagaagattattgactccctgcgagagactgttaatcagcgcaacaccaccttggag
tccctgaaaaggagtctagaggagaaggaaatgttgtgctccgcccttaggaaacagatg
aagtacctggagaaccagcagaatgagaccaagtctgcaaaagaggaaacacgacgcctg
aggaccaagatgaagacatttgagagtcttgacctacttctccagggccagcgtggggag
gtggaggccatgatccgggatatgggagtgggccagagtgctgtcgagcagctctccatc
tactgcgtctctctcaagaaagaatacgaaaacctgaaaacgaaccacagaacctcaaat
gagatgactgaaaaactcaagagagaactgttttcatcaaacagcaagttagataaggct
gtattggagctgaatcgaacaaaagacgacttgaaagcagcccagcaggaactggtgaat
gctgacaaacaaatcacgagtttgaagaagaaagtggagttcctgcagaagactctgagc
acaccgtctcgtaccaatgaagccatcagccggctggtctttgagagtccagcacccgtc
cagttgaaacagccctgcctgcgacaaccaatgaacagcgaggacattgatcttaacatg
accttcgacatctccaccccagaggacctaaacaagaaacctgtcgccgccccctccaaa
aagatcagactggaggccacgcaatctgcctcaagccagcctgttaagtactccatagaa
aacaagagcgccaaaggcaaagaagcagaggaggatattgttcttgctcccttcttaagc
aactctctgctcttcagaaagaacacttttggaagtctgcttgatccacagagaggcaaa
gggggcactataagaactggttttgatggacttggaggaagaacgaagttcatacaacct
tctcctctcgcagatatctctccaccagtacggaaggttaagcgtaagaaagtaacaagg
ccattaaatgggatgctttccaccaacctgcaaaaactagatggctttctgcagctctga
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