Acipenser ruthenus (sterlet): 117413897
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Entry
117413897 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1-like protein
KO
K06758
L1 cell adhesion molecule like protein
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117413897
Cell adhesion molecules [BR:
arut04515
]
Immunoglobulin superfamily
L1 family
117413897
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Ig_4
C2-set_2
V-set_CD47
Ig_PDGFR_d4
Receptor_2B4
Fn3_VIN3
fn3_2
Motif
Other DBs
NCBI-GeneID:
117413897
NCBI-ProteinID:
XP_033879239
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Position
25:21597312..21666823
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AA seq
1223 aa
AA seq
DB search
MGFASCFSCKVMKMLRTAGVSFSFALSAILCLLNWTAALDIPLEALGHTNIEQLPTITEQ
SPTSQVAFPFDENVPIKCEGKGNPHPEFKWTKDGQPFDPSDDPRVTMVENSGTFIIGNNG
NISEFQGVYRCSATNKLGTAISEEIEIIIPTIPKFPKEKNPPITVEEGNAVVLQCNPPKG
IPPLKIHWMTISLQHIEQDERVSVGLNGDLYFSNVLEKDSRRDYCCLAAFPRIRTIVQKT
PMTLIVNRTNSILQRKPKLLTPSGGHSTISIVKADTLQLECIAEGLPTPKIEWTRLDGEL
PKRAVFPNQGKLLKIPEVTEAENGLYQCNAANALGKVSHNFQVTVEEPPRWVSKPESMIY
TIGSDVTLDCKAAGKPEPTIQWKVNGVPLRNMPVSIDNQIVRRNVKKNDSAVYQCEASNK
HGTILASANILVINLAPMLLTDNNLEYAAVEGKDVLLDCKVFGSPHPVVEWDREDSASPV
QGPKYSIYENGSLNIKNTVKEDSGLYTCLTGNTEGKAAITAILDIRDATQIVEPPENIKV
LRGSTAQFTCGAKYDSAFANDFQVSWNKDNEEITFIHTDNSRFYVEDGVLQIMNVSAEDQ
GNYTCVANTSLDQAQETAELIVLDVPDPPEELKLSEPKNTSVRLNWTPGNSHNKPIIEFI
VEYEESRWKPGDWHELVRVPGNHTSALLKLHGHVDYQFRVSAVNEIGRSQPSDPSDRYKT
LPTAPENNPGGIIMEGNLPNEIHIKWEPLKPIEQNGPGLEYKVSWRRKGVEDNWNEEVVK
RHSFFIRNTPTFEPYEIQIQAINHLGFGPEPEVVTGFSGEDFPESAPQNVTVEIMNSTVI
RVNWLRVPQESIRGHLGGYRVHWWKVRSLLEGKRGHSEKHSLTFHGDRNHGMVPGLKPFS
EYSLIVMAFNGRGNGPASTPFTFKTPEGVPEHPALLRVASFSKDSITLLWVPPLEQNGIL
TGHMLQYQLINDTEELGNLHNITISDLTVTRWKVGGLETSSKYKFYMSACTRVGCGKPIT
EEGITTMEGGKGNWKISEAVNITQNFHIIEGLDPGSEYTIRLMTKNWVDNTSIFEDVVET
RGKAYAGIYDGISTQGWFIGVMCAVALLTLIMLIACFVQRNKGGKYSVKEKEDLHPDLES
PGINDDTFCEYSDNDEKPLKGSLQSLDGEIKAAESGDSLAGYGDEEHDQFNEDGSFIGEY
AAHKNKGPVGVNGSSKGLHQVTA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgcaagctgcttcagctgcaaagtgatgaagatgttacggactgcaggtgtt
tcattctcatttgccttatctgcaatactatgcttattaaactggacagcagccctagac
ataccacttgaggccttaggtcatacaaacattgaacaacttccaacgatcacagagcag
tcaccgacctctcaagtagcgtttcccttcgatgaaaacgttccaattaaatgtgaagga
aaagggaatccgcacccagaatttaaatggactaaggacggtcagcctttcgatccctca
gacgacccaagggtgactatggttgaaaattcaggaacatttataatcggaaacaatgga
aacatatcagagttccagggtgtttatcgctgttctgccacaaacaaactgggaacagcc
atttcagaagagatcgaaatcataataccaaccatcccaaaatttcctaaagaaaaaaat
ccaccgataacagttgaagaaggaaatgctgttgttctgcagtgcaacccccctaaagga
attcctcccttaaaaatacactggatgacaattagtctgcagcatattgaacaagatgaa
agggtttctgtggggctcaatggagatctgtatttctcgaatgtcctggaaaaggacagt
cggagagactattgctgtcttgcagcttttccacgaatcagaactattgtgcaaaagaca
ccaatgaccctgatcgtcaatagaactaactccattctgcagagaaaacccaagcttctg
acgccctctggtggtcattctacaataagtattgtgaaggcagacacacttcagttggag
tgcattgcagaaggactcccaactcctaaaatcgaatggacccgactggatggagaacta
ccaaaaagagctgtgtttccaaaccagggaaaactccttaaaatacctgaagtcacagaa
gctgaaaatggcttatatcagtgcaacgctgccaatgctttggggaaagtatcacataac
ttccaagttacagttgaagagccacctcgatgggtatctaagcctgaaagtatgatatat
acgattggatcagatgttacattagattgcaaagctgctggcaagccagagccaacaata
caatggaaagttaatggcgtgcctctcagaaatatgccagtttccattgacaatcaaatt
gtgcgcaggaatgtaaaaaaaaatgacagtgcagtttatcaatgtgaagcttccaacaag
catggcactattcttgccagtgctaatatcctggtaattaatcttgctccaatgttactt
actgataataatctggaatatgcagcagtggaagggaaagatgttctcctggactgcaaa
gtgtttggatcaccacaccctgtagttgaatgggacagagaagactcagcctcacctgtt
caaggtccaaagtattctatatatgaaaatggttccttgaacataaagaatactgtaaag
gaagattctgggctgtatacctgtttgactggaaacacagaaggaaaagctgcaatcact
gccatattagatataagagacgctacacaaattgtggaacctccagaaaatataaaggtt
ctaaggggaagcacagctcaattcacatgtggagcaaagtatgattctgctttcgcaaat
gacttccaggtttcatggaataaagataacgaggaaataacttttatccacacagacaac
agcagattttatgttgaagatggtgtgttgcaaataatgaacgtgagtgctgaggatcaa
ggaaattacacctgtgtagctaacacttccttagaccaagcccaggaaacagcagagctt
attgtgttggatgtgcctgacccaccagaagaactgaaactctctgaacctaaaaacaca
agtgtgagactgaactggacccctgggaacagtcataacaagccaataattgagttcatt
gttgaatatgaagaatccagatggaagccaggggattggcatgaattggtaagagttcct
gggaatcacacttcagcacttctgaagctacatggccatgtagactaccagtttcgtgtc
tcagcagttaatgaaattggaagaagccaacccagtgacccttcagacagatacaaaact
ctacccacagcgccagaaaacaatccaggtggcatcataatggaaggaaatttgcctaac
gaaattcatattaaatgggagcctctgaagcccattgaacagaatggtcctggactggag
tacaaagtaagctggagacgaaaaggagttgaggataactggaatgaagaagtagtgaaa
aggcattccttctttatacgtaacactccaacatttgaaccatacgagattcaaatccaa
gcgataaatcatctcggctttggtcctgagccagaagtggtgactggattttcaggagag
gatttcccagaatctgctcctcaaaatgtcacagtggagatcatgaacagcacagtaatc
agggtcaactggttaagagttccacaggagagtatccgtggccatcttgggggatatagg
gttcactggtggaaggtgagaagcttgctggaggggaaaagagggcatagcgaaaaacat
tctttgacattccatggggacagaaatcatggaatggttccaggactgaaacctttctct
gaatacagtctaatcgttatggcttttaatgggagaggaaatggaccagcaagtacgcct
ttcacgtttaaaaccccagaaggagttccagaacatcctgctttattgagagttgcaagt
ttcagtaaggattcaataactctcttatgggtaccaccactggagcaaaatggcatcctc
acaggacacatgttgcaataccaactgattaatgacacggaagagctaggcaacctgcac
aacatcaccatctcagaccttacagtgaccaggtggaaggttgggggcttggagacaagc
agcaagtacaagttctatatgagtgcctgtacaagggtgggctgtggaaaaccaattaca
gaagaaggaataaccaccatggaaggaggtaaaggtaactggaagatttcagaagcagta
aatattacacaaaatttccacatcattgagggacttgatcctggatctgaatatacaatc
cgtcttatgactaagaactgggttgataatactagtatttttgaagatgtggtcgagacc
agggggaaagcttatgcaggtatttatgatgggatttccacacaaggatggttcattggc
gtgatgtgtgctgtagctcttcttaccttaattatgctcattgcctgctttgtccagagg
aataaaggcgggaaatattcagtgaaagaaaaagaagatttacatccagacttagaatcc
ccaggaattaatgatgatactttctgtgaatacagtgataatgatgaaaaaccactaaag
ggaagccttcagtcgctggatggagaaattaaagctgcagagagtggtgacagtcttgcc
ggttatggagatgaagagcatgatcagttcaatgaagacggctcttttattggagagtat
gctgcacacaagaacaaagggcctgtgggggtgaatggaagctcaaaaggattacatcaa
gttactgcataa
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