Acipenser ruthenus (sterlet): 117414029
Help
Entry
117414029 CDS
T07327
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117414029
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117414029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Alanine_zipper
F5_F8_type_C
MurB_C
Motif
Other DBs
NCBI-GeneID:
117414029
NCBI-ProteinID:
XP_034759836
LinkDB
All DBs
Position
21:complement(12257924..12296420)
Genome browser
AA seq
1778 aa
AA seq
DB search
MCTLAQDPDLAHGCSHGSCYPATGDLLVGRAEKLKASSTCGLRKKEPYCIVSHLQDEKKC
FQCDSRRAYDDKYNSISHRIDNVITTFKPHLKKSWWQSENGKSEVSVQLDLEAEFHFTHL
IMTFKTFRPAAMLIERSADFGRTWQVYRYFAQDCASAFPGVSTGPLRKVDDILCESRYSD
IEPSTEGEVIYRVLDPAIRIQDPYSPQIQNLLKITNLRVNFTKLHTLGDNLLDSRAEIKE
KYYYAMYELVVRGNCFCYGHASECAPISGIRDDIEGMVHGRCVCKHNTQGLNCEQCDDFY
NDKPWRPAEGRNTNACKKCNCNSHSNHCHFDMAVYLATGNASGGVCDDCLHNTMGRSCEM
CKPFYYQDPTRDIRDPSVCVACDCDPDGSLNGGICDGHDDPTQGMIAGQCRCKDHVEGPR
CDKCKSGFFGLSSDNPKGCQPCQCDPRGTVSNSPQCDTISGDCFCKRLVTGRSCSQCLPE
HWALSHDLHGCRACDCDVGGATDNQCSMETGQCRCRAHMVGRQCSQVESGYYFMALDHYT
YEAELARLGQGCAVVVREPQPNRPPTWTGTGFARVPEGGNLEFQINNIPYSMEYDVLIRY
EPQFPEEWEKVRVSVIRPGAIPTSSPCGNTIPADDLLVVSLPPLSRYVVLPQPVCLERGV
SYTIRMEFPRYTSRERVPNANILIDSMALLPRYSSLEMFIGGDPVSMNRKESYERYRCHD
NNKGVIRPQPTDICAKLISSLSATIHNGALSCQCDPQGSISSECNPNGGQCRCRPNVFGR
RCEQCAPGTYGFGPGGCKPCECSLEGSQTRFCEPLSGQCPCSPGAFGLRCDRCQPGHWGF
PNCRHCQCNSHAEECDQRTGACLTCRDNTSGDKCERCISGYYGNPVLGSGEQCRPCPCPD
GPNSGRHFASSCHQDNRNRQVVCNCNQGYTGMVKRSKGSFQRPRCDECAPGFYGNPLQPG
GRCQPCQCNNNIDISDMNACDRRTGQCKKCLYNTEGPNCGLCHPGYYGDAARRNCRKCTC
NFLGTDRRQCSSRDQCECDRSSGQCQCLPNIIGQNCDHCVANYWNLGSGNGCEPCGCDPN
NAVSPTCNEFTGQCQCRHGFGGKTCQDCQENYWGNPNVQCRACDCDPRGIETSQCNRVTG
HCSCRQGVSGVRCDQCARGFSGQFPDCQPCHQCFGDWDRVVQDLASRTRALAGRAQEIQE
TGLTGTYEKNFRELEEKLAEARVIVNARNATAQAITDLMKLINQLRNKIDETTGSLDKIE
RDLTSVQDSNFAASNDLSALERETRALNLSASKLGQQLDTLKNSNFLGAYDSIRSSFDKS
RAAERRANESTVTTPSTVSQSGDTRRKTERLLAEKKNDFNKTNAANKRSLIDLAAKAETL
DMKKINEKVCGAPGDAPCAESPCGGAGCRDDEGNRHCGGLNCNGAVATANNALERAKYAE
KELSKAISEVDELFQKVAQAKVKADEAKVRAQAALDKANATKAKVDRSNKDLRDLIKQIR
GFLTQDGADPDSIEMVASHVLELSIPASPQQIRHLAEEIKDRVNSLSNVDAILEQTNDDV
RKAEQLLQDAKRARTRAESVKNTAETVKQALEDARRAQAAAEKAIQRAKSDIGQTENRLA
QIQSETAASEKNLNDAMDRLGMLGGQIEALKTKRANNSLVASRAEETATMARDKANEAKQ
LLDGELTDKYRTVQDLVDRKAKTVQEAKQKAEKLRDEAKKLLKEAQNKLQRLNDLEIDYE
ENEKTLESKARQLDGLEDKMRGILKDINQQIQIYNTCQ
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccctggcccaggaccctgacctggcacatggctgctctcatggaagctgctac
cctgccacgggagacctgctggtgggccgggccgagaaactcaaggcctcctccacctgc
ggcttgagaaagaaagagccttactgcatagtcagccatctacaggatgagaagaaatgc
ttccagtgtgattcccggcgtgcctacgacgacaagtacaacagcatcagccaccggatc
gacaacgtcatcaccacgttcaagccgcacctcaagaagtcttggtggcagtctgagaac
gggaagtcggaagtgagcgtgcagctggaccttgaggctgaattccacttcactcacctt
atcatgacctttaagactttccgccctgctgccatgctgattgagcgctctgctgatttc
ggacgcacctggcaggtgtatcgctatttcgcccaggactgcgcgtcagcgttccccgga
gtctccacgggtccccttcgcaaggtggatgacatcctctgtgagtcccgttactcagac
attgagccatctacagagggagaggtgatttacagagtgctggaccctgccattcgcatt
caggatccctacagccctcagattcagaacctgctaaagatcaccaatctgcgggtgaac
tttaccaagctgcataccctgggggataacctgctggattcgcgtgcggagatcaaggag
aagtattactacgccatgtacgagctggtggtgcgcgggaactgcttctgctatggacac
gcctctgagtgcgcccccatctccggcatccgagacgacattgagggcatggttcacggc
aggtgtgtctgcaaacacaacactcagggcctgaactgtgagcagtgtgacgatttctac
aatgacaagccctggagaccggctgaagggaggaacaccaacgcctgtaagaaatgcaac
tgtaatagccattccaaccactgtcacttcgacatggcggtatacctggcgaccgggaac
gcgagcgggggcgtctgtgacgactgcctgcacaacacaatgggccgcagctgtgagatg
tgcaaacctttctactaccaggaccccacccgtgatatcagagacccgtccgtctgtgtg
gcctgtgattgtgaccccgacggctctttgaacggagggatctgtgacgggcatgacgac
cccactcagggcatgatcgctgggcagtgccgctgcaaggaccacgtggagggcccgcgc
tgcgacaagtgcaaatccggattcttcgggctgagcagcgacaaccccaagggctgccag
ccctgccagtgtgacccccgtggtactgtgagcaacagcccccagtgtgacaccatcagc
ggagactgcttctgtaagcgcctggtaaccggccgcagctgcagtcagtgcctgccggag
cactgggccctgagtcatgatctacatggttgccgagcatgtgactgtgatgtgggagga
gctactgacaaccagtgctccatggagacggggcagtgccggtgtcgcgcgcacatggtg
gggcggcagtgtagccaggtggagtccggatattattttatggctctggaccactacacc
tatgaggctgagcttgcacgactagggcagggctgtgcagtggtggtgagggagccccag
cccaaccgcccccccacctggaccggcaccggcttcgcacgagtcccagaaggaggcaat
ctggagttccagatcaacaacattccctattccatggagtacgatgttctgatccgatac
gagccacagttccctgaagagtgggagaaggtgcgagtctcagttatccggcccggtgcg
atcccgaccagcagcccgtgtggaaacaccatccctgctgacgatctgcttgtggtctcc
ctgcctcccttgtccaggtatgtggtgctgccccagcctgtgtgtctggagcgtggagtc
agttacaccatccgcatggagtttcctcggtacacctccagggagagagtccccaacgcc
aacatcctcatcgactcgatggcgctgctcccccggtactcctctttggagatgtttatc
ggcggcgaccccgtctccatgaaccggaaggagagctatgagcgctaccgctgccatgac
aataacaagggcgtgatcaggccgcagcctactgatatctgtgctaaactaatcagcagc
ctatctgccaccatccacaacggagctctgtcttgtcagtgtgaccctcagggctccatc
agctcggagtgtaaccccaacggagggcagtgtcgctgccgccccaacgtgttcggccgt
cgctgtgaacagtgtgcgccggggacctatggcttcgggcctggaggatgcaaaccatgc
gagtgcagtctggaggggtctcagacccgattctgtgagccgctcagcggtcagtgtcca
tgcagcccgggagcctttggcctgcgttgtgaccgctgtcagcctggacactggggcttc
cccaactgccgtcactgccagtgcaacagccacgctgaggagtgtgaccagagaaccgga
gcctgtctgacctgccgggacaatacatccggggacaagtgtgagaggtgtatcagcggt
tactatggaaaccctgtgctgggttcaggagagcagtgtcgcccctgtccgtgccctgat
gggcccaatagcggacgccattttgcttcttcatgtcaccaggacaatcgaaacaggcaa
gtcgtctgtaactgcaaccagggatacacaggaatggttaagcgatcaaaaggaagcttc
cagcgtccccgttgtgatgagtgtgcccctggtttctatggtaaccccttgcagcctggt
ggccggtgtcagccctgccagtgtaacaacaacattgatatctctgacatgaacgcatgt
gaccgacgcacagggcagtgcaagaagtgcctctacaatacagaggggcctaactgcggg
ctctgccatcctggttactatggagacgcggccagacgcaactgcaggaaatgcacatgt
aacttcctgggcactgaccgcagacagtgcagctctcgtgatcagtgtgagtgtgaccgc
agtagtgggcagtgccagtgtctgcccaatatcatcggccaaaactgtgaccactgtgtg
gccaactactggaacctgggcagcgggaatggctgtgaaccctgtggctgtgaccccaac
aatgctgtcagccccacctgcaatgagtttactggacagtgccagtgtcgccatggtttc
ggagggaagacgtgtcaggactgccaggaaaactactggggaaatcccaacgtgcagtgc
agagcgtgtgactgtgaccctcgcgggatcgagacctctcagtgtaaccgggtgacgggg
cactgttcctgccggcagggcgtgtcgggcgtgcgctgtgaccagtgtgcccggggcttc
tctggccagttcccggattgtcagccctgccaccagtgcttcggggactgggaccgggtg
gtgcaggacctggcgagccgcactcgagcgctggcgggccgcgcccaggagatccaggag
accggcctgactggcacctacgagaagaacttccgcgagctggaggagaagctggctgag
gcacgggtcatcgtgaacgcgcgcaatgccaccgcccaggccatcaccgacctcatgaaa
ctcatcaaccagctccgaaacaagattgatgagacaacaggctctctggacaagatcgag
agggacctgacgagcgtgcaagacagcaacttcgcagcgagcaacgatctgagcgctctg
gagcgagagacccgggctctcaacctgtctgccagcaagctcggacaacagctcgacacg
ctcaagaactctaacttcctgggtgcctatgacagtatccgcagctcctttgataagtcc
cgggctgcagagcgccgcgccaacgagtccactgtcaccacgcccagcactgtcagccaa
tccggcgacacccgacgcaagaccgaaaggctgctggctgaaaagaagaacgatttcaac
aagacgaacgcggccaacaagcggtccttgatcgacctggctgccaaggctgagactctg
gacatgaaaaaaatcaacgaaaaagtatgtggagcccccggtgacgccccctgtgctgag
agcccttgtgggggagcgggttgccgtgacgacgagggaaacaggcactgcggcggtctg
aactgtaacggagcggtggcaacggcgaataatgctctggagagagccaagtatgcagag
aaagagctgagcaaggccatcagtgaggtggatgagctcttccagaaggtggcccaggcc
aaagtgaaagctgatgaggccaaagtgagggcacaggcagcgctggacaaggccaacgcc
accaaggctaaagtggatcgctctaacaaagacctgagagacctgatcaagcagatccgt
ggcttcctcacgcaggatggggcggaccctgacagcattgagatggtggccagccatgtc
ctggagctctccatccccgcctccccacagcagatcagacacctggctgaggagatcaag
gaccgagtcaacagcctctccaacgtggacgccatcctggagcagaccaatgacgacgtg
cgcaaagcagagcagcttctgcaggacgccaagagagccaggactcgcgcagagagcgtg
aagaacacggcagagacggtaaagcaggctttagaagatgctcgccgggcacaggccgct
gctgagaaagcaattcagcgagccaagagcgacatcggtcagactgagaacagactggca
cagatccagtcagagactgctgccagtgagaagaacctgaacgatgccatggaccgcctg
ggcatgctgggtggacagatcgaggccctgaagaccaagcgtgccaacaacagcctggtg
gcgtccagggcagaggagacagccaccatggcacgggacaaagcgaacgaggctaagcag
ctcttagatggcgagctcactgacaagtacagaacggtgcaggacctcgtcgacaggaaa
gccaaaaccgtccaagaggccaaacaaaaagcagagaaactgcgagacgaggccaagaag
ctactcaaggaggcccagaacaagctgcagagactgaatgacctagagatagattacgag
gagaatgagaaaacgctagagagcaaagccaggcagctcgacggactggaggacaaaatg
agagggatcctgaaagacatcaaccagcagatccaaatctacaacacctgccagtaa
DBGET
integrated database retrieval system
