Acipenser ruthenus (sterlet): 117414159
Help
Entry
117414159 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117414159
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117414159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH
zf-CCCH_4
RuvA_C
Motif
Other DBs
NCBI-GeneID:
117414159
NCBI-ProteinID:
XP_033879813
LinkDB
All DBs
Position
25:complement(10230034..10239984)
Genome browser
AA seq
716 aa
AA seq
DB search
MNLDSIQYKPNPAEDFPSWSGKPLARTLNSAETCPSLWNTDFKEPSLSDEPSMNSLAVPA
RSQKGAHMNDRVNRDHCQSPREGQGCVDAALLDPNELQMQVGFFCKLGYSPDEIRAVLQK
LGLNADTNTVLGELVRSGATASEREMVPTNPPGPAVVSRGENSPTMPGTPPPPQEDERDE
GSLLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNYFIDQGHTDITVFVPSWRKEQPRPDV
PITDQHILRELEKKKIMVFTPSRRVGGKRVVCYDDRFIVKLACESDGIIVSNDTYRDLQS
ERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLVQEQKRQHCPYGKK
CTYGIKCKFYHPERINQSQRSVADELRANAKLSTTRAMSHSSPLKDEKKPILSRKSSQPD
MLSMASLEQEMEQKLMLERRNALQKGHITENSLLVKGATLSKRPSKKVAFNQCSHQSPTK
NDSFPCPSQEPLDSGLGSYESQYSEMMPRGPQGHCEHYHPEQRGSGRYSNCSNSRPVYQH
SQSLDQYDSYQQYNCSQKPMTAGTSFHQYNPELPNSRSSNVMGHGGHCYPGYGRPVYQGV
VGPYSLPDDYNPGSVHPQREYWSDPFQVAAHGRSSSLQDHQRFQQHLPSAVYNDQQSHQW
PQQDPYTKEREDVRKKLLAIFNPHQVDKAMSMFPNLFDPQSLAAEILTLKSRGELM
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagacagcattcaatacaagccaaaccctgcagaggatttccccagttggtct
ggaaagcctctagcccgaacattgaactctgctgagacttgcccttccttatggaacaca
gacttcaaagaaccctctttaagtgatgagccaagcatgaacagccttgctgtcccagcc
agatctcagaaaggagcacacatgaatgatagggtgaacagagaccactgccagtctccc
agagaggggcaggggtgtgtggatgcagcgctgctagatcctaacgagcttcagatgcag
gtgggttttttctgtaaactcggctactccccagatgagatcagagctgtactccagaaa
ctgggcttgaatgcagacacgaacactgtgttgggggagctggtccggtctggggccaca
gcctcggaaagggagatggtcccaacaaaccccccaggacctgcagtggtgtcccgaggg
gagaattctccaaccatgccaggtacaccgcccccaccacaagaggatgaaagggacgag
ggaagtcttttaagaccggtggttattgatgggagcaacgtggctatgagccatgggaat
aaagaggtcttttcctgccgtgggatcctgctagctgtaaactattttatagaccaggga
cacactgatatcacagtctttgtaccatcatggagaaaggaacaacctaggccagatgtc
cccatcactgaccagcatattctcagagaacttgagaagaagaaaatcatggtgttcacg
ccatcgcgacgggtcggtgggaagcgggtcgtctgttatgacgatcgattcattgtcaag
ctggcctgcgaatctgatggcatcatcgtgtcaaacgacacctatagagacttgcagagc
gaacgccaagaatggaagcgattcattgaggagcgcctgctgatgtattcatttgtcaat
gacaagtttatgcctcccgatgatccacttggacggcatggtcctagcctggataatttt
ctgaggaagaaaccacttgtacaagaacaaaaacgacaacactgcccctacggcaaaaaa
tgcacttatggaatcaagtgtaaattctaccacccagagcggattaaccagtcgcagaga
tctgtggctgatgagctccgggctaacgctaagctttctacaaccagggctatgagtcac
tctagccctctgaaggatgagaagaagccaatcttgtcaaggaaatcctcccaacctgat
atgctctcgatggcatccctggagcaggaaatggaacagaagctgatgctggagcgaaga
aacgctctgcagaaagggcacatcactgagaattcactcctggtaaaaggggccacttta
tctaagaggccttccaaaaaggtggcttttaaccagtgcagccaccaatccccaacaaaa
aatgactctttcccctgcccttcacaagaacctttggattcaggcctgggatcctacgag
agccagtattctgaaatgatgcccaggggaccacagggacactgtgagcattaccatcca
gagcaaaggggatctggcaggtacagcaactgttccaatagtcggcccgtttaccagcac
tctcagagcctggatcagtatgacagctatcagcagtacaactgttctcaaaaaccaatg
actgccggaactagcttccatcaatataacccagagctaccaaactccaggtcttccaac
gtgatgggtcacgggggacattgctatccagggtacgggaggccagtgtaccagggtgtg
gtgggtccttacagccttccagatgactacaacccaggctctgtacacccccagcgggaa
tactggtcagatccatttcaagtggctgctcatggcagatcaagcagcctacaggatcac
caaaggttccagcagcatttaccaagcgcagtgtacaatgatcagcaatcgcaccagtgg
ccccagcaagatccctataccaaagaacgggaggatgtccgtaaaaagttgctggccatc
tttaacccccatcaggtggacaaggccatgagcatgttcccaaacctgttcgacccccag
agccttgctgctgaaatcctcacgctcaagtcaaggggcgagctgatgtaa
DBGET
integrated database retrieval system
