Acipenser ruthenus (sterlet): 117414193
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Entry
117414193 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: stabilin-1-like
KO
K19020
stabilin-1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117414193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117414193
Glycosaminoglycan binding proteins [BR:
arut00536
]
Hyaluronan
Cell surface receptors
117414193
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
Xlink
FXa_inhibition
RIPR_EGF-like_10th
EGF_ATRAID_C
RIPR_EGF-like_7th
EGF_Teneurin
EGF_TEN
EGF_MSP1_1
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
117414193
NCBI-ProteinID:
XP_034759851
LinkDB
All DBs
Position
21
Genome browser
AA seq
2566 aa
AA seq
DB search
MGVAGGLISFKMFFLLVICLMLSAEAQKKTAQDSRCDARNTLQFSTVCTSCAAVPRAWCP
PGSRRTTQITGVKGCSYLVDLGEETLTLSGCSHTCEKDVTEHKCCPGFWGPDCMPCPSKS
GKPCNWKGICMDGVTGNGTCICEAGFSGFACQECKDENVYGPDCQLECDCVHGICSSGIG
GNGSCICETGYTGVRCDQESQLCHGMDCGENSVCNEGAGGTAVCGCMPGFQKTGQQCLPQ
DPCAQNVCDHNADCVNHGQRKYDCRCKEAYQGDGKVCVPVNPCLIDNGDCPTNSTNCVYK
SVGKTLCVCKSGMEGANPSAGCTLKDVCKKDSCDKSAKCVTGLDGTASCVCKKGQISDGT
FCYGNIIERILELNTESRHKGKLTSAINMFEKGCELALSKRLFTVFVPASTFTVTGMSEK
YLCKLHMIIGLHMFSDLQDKVFWTLGGEPVHFMADKSFSFQRDQSKTYRILQSDLAAANG
IIHIINQPVTNISPEHAENEQDSKKTIEEIIANQHKFSRYQTLLENCEMSPILEGPGPFT
VFVPTNEAVDQHRDGTIIYLLTDGKKKLQELVKHHIYASASVTVDRLAAMPQILTKANQI
ITVNVTSDGRIVLGGKAVVLNQQDIVASNGIIHVIDGILIPPSIVPILPHRCDVTEYNIV
MGQCVDCSKLDTTSCPLGSTELDKFHKGCDYISSVMNIITNRRGCAKYCNRTVVRPDCCK
GFYGPDCKACLGGFQNPCYQHGTCNDGIQGNGTCSCLPDFQGIACHICSNPNKHGEMCDE
DCKCLHGVCDNRPGSKGVCRINSCAEGYTGELCDRVTKPCGPSGLSQYCHINAVCDYSDN
TRCVCRNGYEGDGFSCQEMNPCQKADRGGCSANARCIYTSPGNATCICNEGWAGDGQACV
EIDNCLLNNRGGCHYNADCITQGPGQSECVCKKNYMGDGYNCDIINPCLQSNGGCHSLAK
CKPLGDGERECLCPEGYGGDGAICYGNILTELASNSNFFSFYQWIKSSSLSNPEGNVTVL
VPSENAIKGLKEEVREFWMKPYMLPFLVRVHFLEGAFTTDDLKQRGDVELSTLNPRTKWE
VKDTSGTVMIQNASILISDIPAVNGFINVIDQVLIPSLADIPPPPPGLMQVLNQTTSFSL
FKKALLHYNLTEKIDSSEKYTILIPFNKAIEDHLNATGSEELDEDSVRYHIIVEERLLPG
NLRNGIHKSTMLGSSYQIMFHNNNENQTYANEVPLNGVFYSTRNGMLMGISQLLHIHKNR
CDKNVTIPTKGFCGRCDGNYRCPKRAIPLTHVADMAALKSNCKYRKKNKKVDGCSYQCLT
VTEDHNCCPGYFGLNCFKCPGKPGNWCSNNGICQDGVLGSGDCLCKEGFHGTACEDCEPG
RHGTSCESECTCIHGKCLDGIGGDGKCVCYKGWKGANCSVEIVADPCNDTCDPNANCLTG
LPGSLPTCSCSAGYAGNGSFCSEINPCDSGNGGCSEHANCTKISPGERSCTCTEGYFGDG
VVCIEKDGCLIDHGGCHRLAECIKTGPNLVGCNCLPGYSGDGKMCLPINPCKTNNGGCSD
FAWCRYTEPGSRNCSCRFSYVGDGLTCRGRLHRELDREPAASWFNKKAQTHMLKELNGDG
PFTVFVPHQDYISNDTIEEWKNKSLTGHMVRYHVVGCQTLLLSDIQSLSTLVTLSGSSLQ
ISVEEDTVYLNKEVKIVSSDFVTSNGVIHFIDKVLVPSDLQNKSDLHQPKKNVTETAESH
GYTVFSKLLQDAGLLSMVQNSLHHPFTMLWPTDKVFNSLPDERKKWLYSEDHRDKLAAYI
KAHIIRDNKIVAADLPNQKSLRTLYGSLISFACSRNITGDIFVDDGNAKIVDRQIEFDVG
IAYGIDQLLEPPNMGARCDDFVTTTVSGRCGSCSFTPSCPTGSTMVRVSLCSHPYYYTSG
LFHSPFGYRRRYHHLMNPFHHQLSAGCMKECNSTQWVEKCCKNHYGRDCQVCPGGLEAPC
SNHGACNDGMAEQGKCNCSLGFTGTTCGQCAPNRYGPDCRECSCTVHGKCAEGIDGDGSC
FCKEGWTGENCELQLGVKPVCTPECDANAVCQPNNICECDSLYEGDGRNCTVVDLCMDSN
GGCHEHATCTQNDVSRTCTCLPAYTGDGYSCTAINRCVSDNGGCSEFATCIFTGPNERRC
ECNEGFVGNGVQCLEKAIPPLDRCLEENGGCHPQAICADLHFEEKTAGVFHVQSPKGKYK
LTYSDALAACQAEGATMATIAQLSAAQQFGYHSCAAGWLDSENVGYPTTNPSLNCGNNHV
GVVLYNKPGSLYDAYCYRIKDVSCVCRDGYVGDGDFCNGNLLDVVASNANFSVFYSTLLE
YANYSSRGVELVDFLSNETTYETLFVPADAGFRENETLSLRDLEYHISVSDSFIFYDEMS
HGTVIPSRLGYNLSVTVSSFKRWKLTNGSKLVNDHLIVEWDIPASNGILHVIERPLKAPP
PPVLSAVAPASPHSSAAVISTVLAVCLLAVAAGGVLYFCFKPKNEGFHFRYFKADEDEDD
GMPSPAEGRSSLVSVPNPLFSGYNAFTEPFDETTDIDYSDTQNILG
NT seq
7701 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggcggggggcctgatcagtttcaagatgtttttccttttggttatatgttta
atgctctcagctgaggcacagaagaaaacggcacaggacagtcgatgtgatgcacgcaat
actctccagttcagcacagtgtgcacctcttgcgcggccgttcctagagcatggtgtcct
ccaggttccagaaggaccacccagatcactggagtcaaaggctgcagttaccttgtagac
ctgggagaagaaaccctgaccctgtccggttgcagtcatacctgtgaaaaagatgtcacc
gaacacaagtgctgccctgggttctggggacctgactgcatgccttgtcccagcaagtct
ggcaagccctgcaattggaaaggtatctgcatggacggagtgactgggaatggaacttgc
atttgtgaggctgggtttagtggctttgcatgtcaggagtgtaaagatgaaaatgtatat
gggccagactgtcaattagagtgtgactgtgttcatggaatatgcagctctggcattgga
ggaaatggaagctgcatttgtgagacaggatacactggagtaaggtgtgaccaagaatct
cagctgtgtcatggtatggactgtggggagaattctgtttgcaatgaaggtgctggaggg
actgctgtctgtggctgcatgcctggcttccagaaaactggacagcaatgcctgcctcaa
gatccttgtgcccagaacgtctgtgatcacaatgctgactgtgtaaaccatggacaaagg
aaatatgattgcagatgtaaagaagcctaccaaggagatgggaaagtgtgtgttccagta
aacccatgcttgattgacaatggagactgtcctacaaactcaacaaactgtgtatataaa
agcgtaggaaagacattgtgtgtgtgtaagagtgggatggaaggagccaatccctcagct
ggctgtacattaaaagatgtgtgcaagaaagacagctgcgacaaaagtgcaaaatgtgta
acgggactggatgggacggctagctgtgtttgcaagaaggggcagatttctgatggtacg
ttttgctatggaaacatcatagaaaggattttggagctgaacacagagtcaagacataaa
ggaaaacttaccagtgcgattaatatgttcgaaaagggatgtgaacttgccttgagcaaa
agactatttacagtatttgttccagcctcaacgttcacagtaactgggatgtcagaaaag
tacttatgcaaattgcacatgattattggcctgcacatgttcagtgatttacaagacaag
gtgttctggacactgggaggggagccagttcatttcatggcagacaagagctttagcttc
caaagagatcaaagtaaaacgtaccgtatactgcagagtgacctcgccgcagccaatggg
atcattcacattatcaaccagccagtaaccaacatcagtccagagcatgcagaaaatgag
caggattcaaagaaaacaattgaagaaatcatagcaaaccaacataagttcagtagatat
caaacactgttagagaactgtgaaatgtctccgatattggaaggccctggtcctttcaca
gtatttgtaccaaccaacgaggcagtggatcagcacagagatggcactatcatatatcta
cttacagatggaaagaaaaaacttcaagagcttgtgaaacatcacatttatgcatcagcc
tcggttactgtagacaggctggctgccatgccccagatcctcaccaaggcaaatcaaata
atcactgttaacgttaccagtgatggcagaattgtattgggtggcaaagcagtggtttta
aatcagcaggatattgttgcatcaaatggaatcattcacgtcatagatggaattttaatt
cctccttcaattgtcccaatcctgccccacagatgtgatgtgaccgagtataacatcgta
atgggtcagtgtgtggattgcagtaaactggacaccacgagctgtcctttaggaagcaca
gagctggacaagtttcacaagggctgtgactatatctcctctgttatgaacataatcact
aacaggaggggttgtgccaaatactgcaacaggactgttgtgagacctgattgctgtaag
ggcttttatggccccgactgcaaagcttgcctgggcggatttcaaaatccgtgttaccag
catgggacatgcaatgatgggattcaaggcaatggcacctgcagctgtcttccagatttt
caaggcattgcctgtcacatttgttccaacccaaacaaacatggtgaaatgtgtgatgaa
gattgcaagtgcttgcatggtgtttgtgataacaggcctggaagcaaaggggtgtgcagg
atcaattcctgtgcagaaggttacacaggagaattgtgcgacagagtaacaaagccttgt
ggcccgtctggcttgtctcagtattgccatataaacgctgtctgtgattacagtgacaat
acaaggtgtgtttgccggaatgggtatgaaggagatggcttttcttgtcaggaaatgaac
ccctgtcagaaggctgaccgaggtggctgttctgcaaatgcaaggtgcatctacacaagc
ccaggcaatgccacctgcatttgtaatgaaggctgggcaggggatgggcaagcctgtgtg
gagattgacaactgtttacttaataacagaggaggctgccattacaatgcagactgtata
actcagggtcctggacagagcgagtgtgtgtgtaagaagaactatatgggagatggttat
aactgtgacataataaacccctgtttgcaaagcaatggaggctgtcattccttggctaag
tgcaagcctcttggagatggtgaacgagagtgtctttgccctgagggttatggaggggat
ggagctatatgctacggaaacattttaacagaactggcaagcaattccaacttcttcagt
ttttatcagtggatcaagagttcctcattgtctaacccagaaggcaatgtaactgtcctg
gtgccatctgaaaatgccataaagggtttgaaagaagaggttcgagaattctggatgaag
ccttacatgctgccatttctagtccgagtgcactttctggaaggcgcgtttaccacggat
gatctaaagcagcgaggagatgtggagctgtccacactgaacccacgcacaaagtgggaa
gtaaaggacaccagtgggactgtgatgatacagaacgccagcatcctcatttctgacatt
cctgcagtgaatggtttcattaacgtcattgaccaggttttaataccctcactggcagat
attcccccgccacccccaggtctaatgcaagtcctgaatcaaaccacctccttcagcttg
ttcaagaaggctttactgcattacaatctgacagagaaaattgactcatcagaaaagtac
accattcttattcctttcaataaagcaatagaggatcatctcaatgcaacaggatcagaa
gagctggatgaagactctgtaaggtatcacatcatagtggaagaaagactgctgcctggg
aatctgaggaatgggattcacaaaagtactatgttgggatcctcttatcaaataatgttt
cacaataacaatgaaaaccagacctatgccaatgaagtgccactgaacggggtattttat
agtactagaaatgggatgttgatgggcatttctcagcttttacacattcataagaaccga
tgtgacaaaaacgtaaccattccaacaaaggggttctgtggacgttgtgatggaaactac
aggtgtcctaagagagcaatcccacttactcatgtagcagatatggcagctctgaagtcg
aactgcaaatacagaaaaaagaataaaaaagtggatggttgttcctaccagtgtttgact
gtcaccgaggaccataattgctgtccaggctattttggactaaattgctttaagtgccca
ggaaagccagggaactggtgttccaacaacggcatctgtcaggatggtgttctgggctca
ggggattgcctgtgcaaagaagggttccacggcaccgcctgtgaagattgtgagcctgga
cgacatgggaccagctgtgaatcagaatgtacatgcatccatgggaaatgtctcgatgga
ataggaggcgatgggaagtgtgtctgctacaaagggtggaaaggagcaaactgctccgta
gaaattgttgctgacccatgcaatgacacatgtgaccctaacgccaactgcttaacgggc
ctccctgggtcgctcccgacctgctcttgctctgctggatacgctgggaatggaagcttc
tgctcagagattaatccatgtgatagtggtaatgggggatgctcagagcatgcaaactgc
actaagatctcccctggggagaggagctgcacatgtactgaaggctactttggtgacggg
gtggtgtgtatagagaaagacggctgtctaatagaccacggagggtgtcatcgtctagct
gaatgcatcaaaacagggcctaatttagttggttgcaactgtctcccaggctacagtggg
gatggtaaaatgtgtttgccgatcaatccttgcaaaacgaacaatggaggctgcagtgat
tttgcctggtgtagatacactgagccagggtcccgcaattgctcctgtaggtttagctat
gttggagatggtctgacatgcagaggaaggttacatcgggaactagaccgagaaccagca
gcttcatggtttaataaaaaggcacagacgcacatgttgaaggagttaaatggagacggg
cctttcactgtctttgttccccatcaggattacattagtaatgacacgatagaggagtgg
aagaacaagagtctgactggtcacatggtacgctatcacgttgttggctgccagacgctg
ctgctctctgatattcagtccctcagcacactggtcactctgtctggaagctccctgcag
atatcggtggaagaggacaccgtttacctaaacaaagaagtgaaaatcgtcagcagtgac
tttgtgacctccaatggggttattcattttattgacaaggttttagtccccagcgatctg
cagaacaaaagtgacttacatcaacctaagaaaaatgttactgaaacagcagagtctcac
ggatatactgtattcagcaagctgctgcaggatgcaggcttgctgtcgatggtacaaaat
agtctccaccaccctttcacaatgctgtggcctactgacaaggtttttaattctctccct
gatgaaagaaagaaatggctgtacagtgaagatcacagagataaactggcagcgtatatc
aaagctcacatcataagggataacaagattgtggcggctgatctgccaaatcagaaatcc
ctgagaacactgtatggttcactgatctcgttcgcctgcagcagaaacataactggtgac
atttttgtggatgatgggaatgctaagatagttgaccggcagatagagttcgatgttggg
attgcttatgggatagaccagctcctggaaccgcccaacatgggggcccgctgcgatgat
tttgtaaccacaacggtttctggtaggtgtgggagctgcagtttcacaccgtcatgtcct
actggatcgactatggttagagttagtctgtgttcacatccttactattatacttctggc
ttgtttcactcaccttttgggtaccgtagaagataccatcatttgatgaatcccttccac
catcagctttcagctggttgtatgaaggaatgcaattctacacagtgggttgaaaagtgt
tgtaaaaatcattatggaagggattgccaagtctgccctggtggtctggaggctccctgc
agtaaccatggtgcttgtaatgatgggatggctgaacaaggcaaatgcaactgctcattg
gggttcaccgggacaacatgtggacagtgcgctcccaaccgatatggaccagactgtagg
gaatgcagttgcactgtgcatgggaagtgtgctgaaggaattgatggagatggaagctgc
ttctgcaaggagggctggacaggagagaactgtgaactccagcttggagtgaagcctgtt
tgtacacctgaatgcgatgccaatgctgtatgccagcctaacaacatatgcgagtgtgat
tcactgtatgagggggatggtagaaactgtacagttgtggatttgtgcatggattccaat
ggaggatgtcatgagcacgcaacctgcactcagaacgatgtcagtcgcacctgtacgtgt
ttgcctgcctatacgggagatggctactcctgtacagcaataaaccgctgtgtatctgat
aatggaggatgtagtgaatttgccacgtgtatcttcactggtccaaatgaacgaaggtgt
gaatgcaatgaaggctttgtgggtaatggagtgcagtgtctggaaaaagcaattcctcca
ctagatcgctgcttagaggagaatggaggctgtcatccacaggctatttgcgcagacctt
cactttgaagagaaaacggctggagtgttccatgtgcagtcaccgaaagggaaatacaag
ctaacctacagtgatgcgctggcagcctgccaggctgaaggagctaccatggcaaccatt
gctcagctgtccgcagcacagcagtttggttaccattcctgtgcagcaggttggctggat
tctgaaaatgtcggttatccaaccacaaacccctcactcaactgtggcaacaatcatgtt
ggagttgtgctgtataataagccagggagcctttatgatgcttactgctacagaattaaa
gatgtcagttgcgtctgtcgagatggatatgtaggggacggagatttctgtaatggaaac
ttgctggatgttgtagcttccaatgctaatttctcagtgttttactctacattactagag
tatgcaaactattcttcaaggggagtagaacttgtggattttctgtcgaatgagaccacg
tacgagacgctgtttgtgccagcagacgctggatttagagagaacgagactttatccttg
agagaccttgagtatcacatctctgtcagtgacagctttatcttctacgatgaaatgtct
catggcacagttataccatccagactgggttacaacctctctgtgactgtatcctcattt
aagagatggaagttaaccaatggttccaaactagtaaacgaccatctgattgtagagtgg
gatatccctgcttccaatggaattctccacgtcattgaaagacctttgaaggccccgcct
cctccagtcctgtctgctgtggctcctgcctcccctcacagctctgctgcagtcatctcc
actgtcctcgcggtgtgtttgctggctgtggctgctggcggggtgctctacttctgcttc
aaacccaagaatgagggctttcacttccgctatttcaaggcggacgaagatgaagacgat
ggtatgccctcgccagcagaagggagatcttcattggtttcagtaccgaatccactgttc
agtggttacaatgcatttacggaaccttttgatgaaaccacagacattgattattcagac
actcagaatattcttggttag
DBGET
integrated database retrieval system
