Acipenser ruthenus (sterlet): 117414559
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Entry
117414559 CDS
T07327
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117414559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117414559
Transporters [BR:
arut02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117414559
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Motif
Pfam:
SNF
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
117414559
NCBI-ProteinID:
XP_034777988
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Position
7:29870556..29882974
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AA seq
403 aa
AA seq
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MHQITGGLDEPGTLRWPLAGTLALAWVLVYFSIWKGVEWTGKVVYFSSTYPYFMLFILFF
RGVTLPGAKEGILFYITPDFSKLTQSEVWLDAATQIFFSYGLGLGSLIALGSYNHFNNDV
YKDSLIVCCINSGTSMFAGFVIFSIVGFMSHITKKPIQELAASGPGLAFLAYPQAVTQLP
LSSLWSVLFFSMLMMLGLDSQFCTVEGFVTALIDEYPVLLRSRKKMFIAGVCFLSYIIGF
SNITQGGLYVFKLFDYYSASGMCLLFLVFFETVSISWFYGVDKFYDNIEEMIGYKPCIWW
KLCWCYFTPLVCLGVFLFSAIEMTPLTLGKYVYPAWGQGIGWVMALSSMVLIPGYIIYML
FTTKGSFRQRLHKMTTPKEELSDQHDSLRQQTSFTGSFSDAAV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagataacaggaggcctggatgagccaggcacgttgaggtggccgctcgctggc
acgctggccctggcctgggtcctcgtctatttctccatctggaaaggagtggagtggaca
gggaaggtggtgtatttctcctccacctatccctacttcatgttgttcatcttgtttttc
cgtggggtgactctcccaggggcaaaggaaggcattctcttttacattacccctgatttc
agtaaactcacccaatcggaggtctggctggatgcagccactcagattttcttctcctat
ggtctgggactgggctctctgattgccctcgggagctacaaccatttcaacaatgacgta
tacaaggactccctcattgtctgctgtataaactctggcaccagcatgtttgcaggcttc
gtcatcttctccatcgtgggcttcatgtctcacatcaccaagaaacccatccaggagctg
gcagcttcaggaccaggcctggccttccttgcctacccgcaggccgtcactcagctgccc
ctgtcctccctgtggtcagtgctgttcttctcgatgctgatgatgctggggctggacagc
cagttttgcacagtggaaggctttgtcaccgccctgattgacgagtaccccgtgttactg
aggtcaagaaagaaaatgttcatcgctggggtgtgcttcctgtcctacatcatcggcttt
tcaaacatcacgcagggcgggctctatgtgtttaagctgtttgactattactcagccagt
ggaatgtgtctgctgttcctggtgttctttgagacagtgtcgatatcctggttttacggg
gttgacaagttctatgacaacattgaggagatgattggctacaagccctgtatctggtgg
aagctgtgctggtgctacttcactcccctggtctgtctgggggtgtttctgttcagtgct
atcgagatgaccccgctgaccttggggaagtacgtgtacccagcctggggtcaggggatc
ggctgggttatggccctgtcgtccatggtgctcatccccggatatatcatctacatgctc
ttcaccactaaaggcagcttcaggcagcgtttgcacaagatgaccactcctaaagaagaa
ctcagcgatcagcacgacagtctcagacagcagacctccttcactgggagcttcagcgat
gctgcagtgtag
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