Acipenser ruthenus (sterlet): 117414737
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Entry
117414737 CDS
T07327
Name
(RefSeq) transcription factor RelB homolog isoform X1
KO
K09253
transcription factor RelB
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117414737
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117414737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117414737
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117414737
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
117414737
NCBI-ProteinID:
XP_033880404
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Position
7:39213880..39233505
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AA seq
637 aa
AA seq
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MKNMSGEDGDAHTCTPHTDDSRTSVVDHSASQLQDHDAELELINEYINEDEGLKPLLPGP
PPPPTPLLETLTTSQLIPRSTECVSSPQPQPIGDASYSHHSFGLVTGGAVMKRRSGAGPP
PQLVARGTAQRSGTRRLVQRGGQAGSCGDTGTQGLEEFLNLPKLLITEQPKQRGMRFRYE
CEGRSAGSILGESSSEQNKTLPSIEIQGCIHQVKKVKVTVSLVCRDIPYRPHPHSLVGKD
CEDGVCVVSFSPRTNRKHSFSNLGIQCVRRREVEPALEKRRSQGIDPFNTAQSRSIDDVE
MNVVRLCFQCEVLFDEGNKTNLTPVVSEPVFDKKATTTSELKINRLNTARGPCSGKTEIY
LLCDKVQKDDIEIIFSLEGWEAKAEFAQTDVHRQIAIVFKAPPFNELDITEEVEVNVQLR
RISDQMDSEPVKYTYFPENQDPYDVNRKRKTARSKLKVEIDETEQTTHLPDPFPPNDWSA
HQPLNPPQSDNTFLENAFLNNYLNESTLLGDIQHNLTQEQDALTWALLENQEMQAYNDIH
LGGENAMSLAATMNMCIHALGKTSDPFNQQHGYLDPSFQPTPVMDHQFQACPNYNLTMNG
NIESSLGQGAFAGYLEQNLRPADEKVNTNVPEKTEKP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatgagcggagaagacggagatgcccatacctgcacgccccacacagatgat
tccaggaccagtgtagttgatcacagtgcatctcaactgcaagaccatgacgcagagctc
gaattaatcaacgaatatatcaatgaagatgaaggcctgaaaccattgttgcctggccca
ccaccaccacccactccactgctggagacgctgacaacatcacaactcatacccaggagc
acagagtgtgtcagctcaccacaaccacagccaatcggagacgcaagctattcgcatcac
agcttcggactggtgaccggcggggcagtgatgaaacgtcggtcaggggcagggcccccc
ccccagctggtagcccggggcaccgcacagcgcagtggcaccaggaggctggtccagcgg
ggggggcaagcagggtcctgtggagacacgggcactcaggggctggaggagttcttgaac
ctgcccaagctgctgatcacagagcagcccaagcagagggggatgcgctttcgctacgag
tgcgagggtcgctctgcaggcagcatcctgggggagtcgagcagcgagcagaacaaaacc
ctgcccagcattgagatacaaggctgcattcatcaggtgaagaaggtgaaagtgacagtc
tcgctggtgtgtagagacattccttacagacctcacccgcacagcctcgtgggtaaagac
tgcgaggacggggtctgtgtggtgagcttcagcccccggaccaacaggaagcacagcttc
tcaaacctcgggatccagtgtgtgaggcggagagaagttgagccagcgcttgagaagaga
cgcagccaaggcatcgatccattcaacactgcccagtcgagaagcatcgatgatgtggag
atgaatgtggttcgcctgtgctttcagtgcgaggtgctgttcgatgaaggaaataaaacc
aatttgacccctgtggtatctgaacctgtgtttgacaaaaaggccacaacaacatcggag
ctgaagattaaccgattgaacactgcccgagggccgtgctccgggaagaccgagatctac
ctgctgtgtgacaaggtgcagaaagacgatattgagattatcttcagtctggagggctgg
gaggcgaaggcggagtttgcccagactgacgtccacagacagatcgccatcgtgttcaag
gccccgcccttcaatgagctcgacatcaccgaggaggtggaggtcaacgtgcagctgcga
cgcatttctgaccagatggacagcgaacctgtcaagtacacctacttccctgaaaaccag
gatccttatgatgtgaacaggaagaggaaaacggcacgctcgaagttgaaggtagaaatc
gacgagacagaacaaaccacccatctgccagatccttttcctcccaatgactggtctgca
catcagccattaaaccctccgcaatcagataacacatttcttgaaaatgcattcctcaat
aattatcttaatgaatccacattgctcggggacattcagcacaacttgacccaagagcaa
gatgcacttacttgggctctcttagaaaatcaagagatgcaggcctacaatgatatccat
ctgggaggggaaaatgccatgagcttagctgctacaatgaacatgtgcatccacgccctg
ggaaaaacaagcgaccctttcaaccaacagcacggatacttggatccttccttccaacca
acacccgtcatggaccatcagtttcaagcatgtccgaactacaacctcaccatgaacggg
aacattgagtcaagcctggggcaaggtgcctttgcagggtacctggagcaaaacctcaga
cccgccgatgagaaggtgaacaccaatgtgccagagaagacggagaaaccatga
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