Acipenser ruthenus (sterlet): 117414884
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Entry
117414884 CDS
T07327
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117414884
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117414884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
117414884
NCBI-ProteinID:
XP_033880615
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Position
7:42154150..42185083
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AA seq
498 aa
AA seq
DB search
MKMMTGGAVHQNGIFSNAHHHNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGEEGEYF
LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG
VHNFIAEKVREMPQSAQKSEPVSILQPQTTVNPDRIKQAKLIVPNSTAGLIIGKGGATVK
AIMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISY
SNISGPVANSNPTGSPYANSAEVLPSAAAAAAATASSLLGQASLAGVGTFPTTMSSFSGN
DLLTITSALNTLASYGYNTNSLGLGLNPAAASGVLAAVAASANPAAAAAANLLASYASDA
STSIGHHTGHLGGFTLGSLAAATGATNGYLSAASPLMASSFLATEKLAEGAKDVVEIAVP
ENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLIS
QRITYEQGVRATNPQKVG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatgactggaggcgcagtgcaccaaaacgggatattttccaatgctcaccat
cacaaccagcaaccacacatggagtcggacccgccggactctcgcaagaggccgctggag
accccgactgaagcgagcagcaccaagcggaccaacaccggagaggagggtgaatacttc
ctgaaggtgctgatccccagctacgcggccgggtccattatcggcaagggggggcagacc
atcgtccagctgcagaaggagacaggagccaccatcaaactctccaaatccaaagacttc
tacccaggcacgacggagcgagtctgtcttattcagggcacggtggaggctctcaatggc
gtccacaacttcatcgcagagaaggtgcgagaaatgccccagagcgcccagaagagtgag
ccggtcagcatcctgcagccgcagaccaccgtcaaccccgaccgcatcaaacaggcgaag
ctgatcgtccccaacagcacagcgggcctgatcataggaaagggcggtgccaccgtcaag
gccatcatggagcagtccggcgcctgggtgcagctttctcagaagcccgagggcatcaac
ctgcaggagcgcgtggtgaccatcagcggggagcccgagcagaaccgcaaggccgtggag
atcatcgttcagaagatccaggaggacccgcagagcagcagctgcctgaacatcagctac
tccaacatctccggccccgtggccaactccaacccaacgggctccccgtacgccaactcc
gccgaggtccttccctccgcggctgcggcggcggctgctacggcctccagtctcctgggg
caggccagcctggcgggagtgggcactttccctacgaccatgtccagcttctccgggaac
gacctcctgaccatcacttcggccctcaacaccctggccagctacggctacaacaccaac
tccctggggctggggctgaacccggcggccgcttccggagtcctggcggcagtagcggca
agtgctaaccctgccgcggcggccgctgcgaacctgctggcctcctacgccagcgacgct
tcaaccagcatcggccaccacaccggccacttaggaggcttcaccctgggatccctggct
gccgcgacgggagccaccaacggctacctgagcgccgcctctcccctgatggcgagctcc
ttcctggcaacggagaagctagcagaaggagccaaagacgtggtggagattgccgtgccg
gaaaacctagtgggagccatcctcgggaaaggagggaagacgctagtggagtatcaggag
ctgacgggagcacgcatccagatctccaaaaagggggagtttatccccggcaccaggaac
cgtaaagtcaccatcaccggttctccggccgccacccaggccgcgcagtatctcatcagc
cagcggatcacttacgagcagggcgtgcgcgccaccaacccccagaaagtgggctag
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