Acipenser ruthenus (sterlet): 117414956
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Entry
117414956 CDS
T07327
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117414956
Membrane trafficking [BR:
arut04131
]
Endocytosis
Others
Others
117414956
Endosome - Lysosome transport
117414956
Endosome - Golgi transport
117414956
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
117414956
NCBI-ProteinID:
XP_033880712
LinkDB
All DBs
Position
7:62044074..62188110
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AA seq
1282 aa
AA seq
DB search
MERGAGSCPGWHSALWICFLISACFLIIAKGEITCTSCPSPATQHRRGVLLDLQMDAGKS
GTRFLKKHLKRSVEPYYSGLGVAIASDVTGVAGDVKAMGSGVIIPQSIAEAASSKVTGPG
IEEAGGKENMVRGQEMIVDVEKPGDLGQDGGEAVSDRGKFVHKDVKNLIYGDNLLRAKRS
RSSTPLDGEQSGERKTALPSQDGQRLSRAELKWTRDDGKVTNSRQEELKLTSTTFALTGD
SAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGATYEKLNDKVGLKTVL
SYLYVCPSNKRKIMLLSDPEIESSLLISSDEGASYQKFRLNFYILSLLFHPRYEDWILAY
SHDQKLYSSIDFGRKWHLVHENVNPNRFYWSVIGLDKESDLIHMEARTADGHTRYIICRI
QACSELDRSHPFPGFIDTSSLVVQDDYMFIQVTTGGRATYYVSYRRETFIQIKLPKYALP
KDMHIISTDENQVFAAVQEWYQNDTYNLYISETRGIYFTLALEHVKTSRGLEGNIMIDLY
EVAGIKGMFIANKKLAGQVKTYITYNKGRDWRLLKAPVTDLRGNPIHCVLPFCSLHLHLQ
VSENPYTSGSISSKASAPGIIVATGNIGAALTFSDVGMFITTDAGNSWRQIFEEEHSIWF
LDKGGALIAVKQTSLPIRQLAISFDEGKQWIKYSFTLAPLFVDGVLVEPGMESQIMTFFG
HFSHRSEWQLVKIDYKSIFSRRCTEGDYQTWHLNNQGEPCVMGEKQIYMKRRPGNHCMLG
KDYSRMLSSEPCICAASDFECDYGYERHGDGKCLPAFWFNPTTVSRSCSLGQSYLNSTGY
RKVVSNNCTAGVKEIYTARKQQCPHRAPRGLHVVTSDGKLVSSQGSNVTFLVFMEDGDSL
RTNIQLDFGDGIAVSYSNLSLTEGGIKHVYKTAGIFRVGALAENSLGSDSAVLYLHITCP
VEHIHLSVPIVAIKKKEVNLTAVVWPSHSRTITYFWWFENNTEPVITLEGSVSYTFTVEG
MNTVTVQVSAGDAILQDTKTIAVHEFFKSLLLSFSPNLDEYNPDIPEWRDDVSKVIKKAL
VQVSDFPEEQLLVAVLPGIPTAAELFLLPHNNLTEGRKKNEADLEQVSSKTHLMLSIWRS
WISGILVSALNQNVVEFKLKPGVGVIVYITQLTLAPLVDSSPRLSSSAMLMLLSVVILGL
AVFLIYKFKRKIPWINIYAEVNHEKEQEMIGSVSETTPTLILSEFTSREQQLEKKLETRV
IGGTATVGESECTREIPNCTSV
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggctggctcctgcccaggctggcactccgctctgtggatctgctttctg
atctccgcttgttttctgattattgccaagggtgagataacttgcacatcgtgcccatcg
ccggcgacacagcaccggaggggtgtgttactggacctgcagatggacgcggggaagtcg
gggacaagatttctaaagaagcatttgaaaaggtccgtggagccatattattctgggcta
ggggttgcgattgcttcggatgtaacgggtgttgccggggatgtaaaggcaatgggcagt
ggcgtgataataccccagtccatagccgaagcagctagttccaaagtgacaggtcctggt
atagaagaggccgggggcaaggaaaatatggtgcgggggcaagagatgatcgtggatgtg
gagaaaccgggtgatttagggcaggatggtggggaagcagtttcagataggggcaaattt
gtacataaagacgtcaaaaatctgatatacggtgacaacttgctgagagcaaagcggagc
agatccagcaccccactggatggagagcagtctggagagaggaaaaccgctctcccatca
caggacggacaaagactgagcagagctgagctgaaatggaccagagatgacgggaaagtg
accaactccaggcaggaagagttgaaacttaccagcaccacattcgcactgacaggggat
tctgctcataaccaagccatggtgcactggtcaggacacaacagcagtgtgattctcatc
ctgacgaagctctatgactttaacctgggaagtgtcactgagagctctttgtggagatca
actgactatggggctacttacgaaaagctgaacgacaaagtgggcctgaagactgtcttg
agctatctgtacgtctgcccaagcaataaaaggaagataatgctactgagtgatccagag
attgaaagcagtctactcatcagctcagatgaaggggccagctatcagaaattccgtctc
aacttttacattctgagcctgctgtttcatccaagatatgaagactggattctggcttac
agccacgaccaaaagttatacagttctatagattttggaaggaaatggcatctggtacat
gagaatgtcaaccccaacagattctactggtcagtaatcggcttagacaaggagtcagat
ctcatacacatggaggcacggactgcggatggccatactcgatacattatctgcaggatt
caagcctgttctgagctggacagaagccaccctttccctggattcattgacaccagttcc
ctcgtggttcaggatgattatatgttcattcaggtaacaacaggtgggagggccacttac
tatgtgtcctatcgaagagagactttcattcaaatcaaattaccgaaatacgcactgcca
aaggacatgcacattatcagtacggatgagaaccaggtgtttgcagctgtgcaagagtgg
taccagaatgacacctataacctgtacatatcagagacacgagggatctacttcactctt
gcattggagcatgtaaagaccagcagaggactggaggggaacatcatgattgacctctat
gaggtagcagggataaaaggaatgttcattgcgaacaagaagcttgcaggtcaagtgaag
acctacatcacgtacaataaagggagggactggcgtttgctgaaggcacctgtcacagac
ctgaggggaaaccccatccattgtgttctgccattttgttccctgcacctacacttgcag
gtttcagagaatccatatacttctggaagcatctcaagcaaggcgtctgctcctgggatt
atagtggctacaggcaatataggcgctgcgcttaccttcagcgatgttggaatgttcata
accactgatgctgggaacagctggcgacagatttttgaggaagaacacagtatctggttc
ctggataagggtggagctctgattgctgttaaacagacatcactgcctatcagacaactg
gcgataagctttgatgaggggaagcagtggatcaaatacagctttaccttggccccactg
tttgtagatggagtgctggtggagcctggaatggagagtcagataatgacgtttttcgga
cacttcagtcatcgctctgagtggcagctagttaagattgactacaagtctatcttcagt
aggaggtgcacggagggagactatcagacctggcatctaaacaaccagggtgaaccttgt
gtaatgggagaaaagcagatctacatgaaacgcaggccaggaaaccactgcatgctggga
aaggactactccagaatgttgtcttcagagccgtgtatctgtgctgcctctgattttgaa
tgtgattatgggtatgagcgtcatggagatgggaagtgtttgcctgcattctggttcaac
ccaactactgtatcccgaagttgcagccttggacagagttatctcaacagcaccgggtac
cggaaggtggtgtccaataactgcactgcaggagtgaaggagatctacacagccaggaag
cagcaatgccctcaccgtgctccccggggcctccatgttgtcactagcgatggcaagctg
gtctcttcgcaggggagcaatgttaccttccttgtctttatggaggacggcgactctctt
aggacaaatattcagttagattttggagatggcattgcagtttcctactccaatctcagc
ctgacagagggtgggatcaaacatgtttacaagactgctggcatattccgggtgggtgct
ctggcagaaaacagcctggggtcagacagcgccgtcctttacctgcacataacatgtcca
gtggaacacattcatctttctgtcccaatcgttgccataaagaagaaagaagtgaacctc
actgctgtagtatggcccagtcattccagaacaattacttatttctggtggtttgaaaac
aatactgagccagtgatcaccctggagggaagtgtctcctataccttcacggtggaggga
atgaacactgtcacagtacaggtctctgctggggatgcaatactgcaggacacaaagaca
atcgcagtccatgaattcttcaagtctctgctgttgtccttttctcccaatcttgatgag
tataaccctgatatccctgaatggagagacgatgttagtaaagtcattaagaaggctctt
gtacaagtgtctgactttccagaagagcagcttttagttgctgtacttcctggcatcccc
actgctgctgagctttttcttttaccacataacaacctaacagaggggaggaaaaagaac
gaggctgatttagagcaagtaagcagcaagactcatctaatgctttccatttggagatcc
tggatttcaggaattctggttagcgccctgaatcaaaatgtggtggagtttaagctgaag
cctggagttggagtgattgtttatattacacagctgacgttagctccccttgtcgactcc
agtccaagactcagcagttctgctatgttgatgttgctgtcagttgtaattttgggttta
gcagtttttttaatctacaagtttaaaagaaaaatcccctggataaatatatatgcagag
gtcaaccatgagaaagaacaagagatgattggctctgtcagcgagaccacgcccacactt
atactaagtgagttcacgagtcgcgagcaacagctggaaaagaaattagagaccagggtc
ataggaggaactgcaacagttggtgagagcgaatgcacaagggaaattccaaactgcact
agcgtttaa
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