Acipenser ruthenus (sterlet): 117415257
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Entry
117415257 CDS
T07327
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117415257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117415257
03036 Chromosome and associated proteins [BR:
arut03036
]
117415257
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117415257
Coactivators
SAGA/TFTC/STAGA complex
117415257
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117415257
STAGA complex
117415257
TFTC complex
117415257
SAGA complex
117415257
SLIK complex
117415257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
PEP5_VPS11_N
VPS8_N
WD40_like
eIF2A
Motif
Other DBs
NCBI-GeneID:
117415257
NCBI-ProteinID:
XP_033881247
LinkDB
All DBs
Position
7:61663730..61669384
Genome browser
AA seq
755 aa
AA seq
DB search
MAAVQDGSIEPEPENEIKTETSNEVLGNPGDASGGVPPTAPVAAEKPAAAATDSTERQTL
LAVLQFLKKSKLFESEEILRREAGLLNEIGDSQGSGAGGAALGGGGGAEPESGDASSLLS
RVAGAVATAQSANATPAPAKVTPVVTGGDDQPDVNVVLAAYSQQGDPVLYPVYYSGLKRF
IDSVLDCHRAELSQVFYPLFVHMYLELVYNQYEKEAKAFFDKFHGDQECYYKDDLRILSG
LTKKEHMKGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDG
MPRSKGQIDSMSGSLAGEAKREANKAKVFYGLLKEPEIEVPLDDEDEEAENEEGKPKKKK
PKKDSTGSKSKKQDPNAPQQSRIPLPELKDSDKLDKIMNMKEATKRVRLGPESLPSICFY
TFLNAYQGLTAVDFTDDSSLVAGGFADSTVRVWSVTPKKLRGVKTAGDLSLIDKDSDDVL
ERIMDEKTASESKNLYGHSGPVYGISFSPDRNYLLSCSEDATVRLWSLQTFTCLVGYKGH
NYPVWDTQFSPYGYYFISGGHDRVARLWATDHYQPLRIFSGHLADITCTRFHPNSNYVAT
GSADRTIRLWDVLNGNCVRIFTGHKGPIHCLAFSPNGKFLASGATDGRVLLWDIGHGLMI
GELKGHTDTVYALKFSRDGEILASGSMDNTVRLWDATKAFDDIETDDFTAATGHITLPEN
SQELLLGSYMTKSTPVIHLHFTRRNLLLGAGAYNP
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagatgggtcgatcgagccggagccagagaatgaaatcaaaacagaa
acttcgaatgaggttttagggaaccctggcgacgccagcggaggggtccccccaacagcg
ccggtggctgcagagaagccagccgccgcagctacagactcgacagagcgccagaccctg
ctggctgtgctgcagttcctcaagaagagcaaactgttcgagtctgaggagattctgcgg
cgtgaggcagggttactcaatgaaatcggcgactcgcagggctctggggccgggggagca
gccttggggggcgggggaggtgcagaaccagaaagcggggatgcctcttcactcctcagt
cgagtggccggggctgttgctactgctcaaagcgcgaatgcaactccagcgcctgcaaaa
gtgacaccggtagtcaccggaggggacgatcagccagatgtaaacgtagtgttggcagcc
tacagccagcagggggacccggtcctgtacccggtttattacagcgggctgaagaggttc
atagactcggtgctggactgtcaccgagcagagctctcccaggtcttctacccgctcttc
gttcacatgtacctggagctggtctacaaccaatacgagaaggaggccaaggcgtttttt
gacaaattccatggagatcaggaatgttattacaaggacgatttacgcattctttctgga
ctgaccaagaaggagcacatgaaggggaacgagaccctgctggatttccggaccagcaag
ttcgtgctgcggatctcccgcgactcctaccagctgctgaagaggcacctccaggagcga
cagaacaaccagatctggaacatcatccaggagcacctctacatagacatcttcgatggg
atgcctcgcagcaagggccagatcgacagcatgtctgggagtctggctggggaggcgaag
cgggaggctaacaaagctaaggtgttctatgggttgctgaaggaaccggaaatcgaggtg
cccctggacgatgaggatgaagaggctgaaaatgaggaaggaaaacccaaaaagaagaag
cccaaaaaggacagcacaggatcaaagagcaaaaaacaggaccctaacgctccgcaacaa
agcagaattcctcttccagagctgaaagattcagacaagctggataaaataatgaatatg
aaagaagccaccaaaagggtgcgtctgggtccagagagcttgccatctatttgcttctac
acctttctcaatgcctaccagggtttaaccgcagttgattttacggatgattccagtctg
gtggctggaggttttgcagattcgacagtgcgagtgtggagtgtcaccccaaagaaactg
cggggtgtgaaaactgcaggagatctgagcctgattgataaagattctgacgatgtgctg
gagaggattatggatgaaaaaactgccagcgagtccaagaacttgtatgggcacagtgga
ccagtctatgggatcagcttcagtccagataggaactaccttttgtcatgttcagaggat
gccacagttaggctttggagtcttcagaccttcacgtgtctagtggggtacaaaggacac
aactaccctgtgtgggacacccagttctccccctatgggtactatttcatatcgggagga
cacgacagagttgctcgtctctgggcaacagatcactaccagcctttacggattttttct
ggccaccttgctgatatcacctgcacccgattccaccccaactccaactacgtagccaca
ggctcggctgacaggaccatccgactctgggatgtactgaacggaaactgcgtccgtatc
ttcacagggcacaagggtccaatccactgtctggcattctctccaaatgggaaatttctg
gcatccggagcaacagatggacgagtcctgctctgggatatcggacatggattgatgatc
ggtgaactcaaaggacacacggatactgtctatgcgcttaaattcagcagagatggagag
attctggcatcaggctccatggataacactgttcgattatgggatgcaacaaaagctttt
gacgatatagagacggatgatttcactgcagcaactggacacattactcttccagaaaac
tctcaggagctgttactggggtcatacatgaccaaatccactccagtcatacaccttcat
ttcacacgcagaaatttgctgcttggtgcaggggcatataacccttag
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integrated database retrieval system
