Acipenser ruthenus (sterlet): 117415490
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Entry
117415490 CDS
T07327
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117415490
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117415490
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
117415490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
Sina_ZnF
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-TRAF
zf-RING_6
zf-rbx1
zf_C2HC_14
TRAF3_RING
PDZ_Tricorn
IBR_1
Motif
Other DBs
NCBI-GeneID:
117415490
NCBI-ProteinID:
XP_033881826
LinkDB
All DBs
Position
7:complement(9004489..9127485)
Genome browser
AA seq
1055 aa
AA seq
DB search
MGFDLDRFAEDVDPDLKCKLCTKVLEEPLSTPCGHVFCAGCLLPWAVQQRLCPLQCQSIC
AKELHQVLPLKNLIQKLDIRCDYHARGCAKTVKLQELRDHVEMCDYSPAQCRNKGCKEVL
NLRDMDSHMRESCDYRPVGICQKGCGLVLLHKDLIQGNHCCLRALRAQNGALQVKTSSLE
KDTKKQAVKWSKREKSLLAQVSALQNEVQLTALRYQKKFNQYMIHINNITKYVASHCKGG
EQKTLNIVLHRESESLGFNIIGGRPCQNQEDSTAEGIYVSKILKNGPADRADGLQVHDRI
VEVNGRDLLKATHEEAVEAFRSAKEPIVVQVLRRTPITKNHGTSQEIHLVDVCTQTDITF
EHIMALSKLRPSTPPVPDICPFLLSDSCHSLHPMEHEYYEGNEFLSSMPADADRTEEFEY
EEVELCRVNSQEKLGLTLCYRTDDDEDMSIYVSEVGPNSIAARDGRIKEGDRILQINGHD
VQNREEAVALLSSEDCRNIVLLVARPEIQLDEGWLDDERNEFLEELNMEMLKEQHHEAMQ
YTASELEQPKKSEEDGGTTDTATTSSNTQEKDSGVGRTDDSVRNDESSEQENLGDSQKQV
SLQDKRELGQSQDTLVSNEMPCNESCVSGEYIDSDCTAAQDEDCERFRQLLKLKCKIRNS
GEYDLYYSRSSTIECSLKEPNGVERELQLLNEELRNIELECQNIMQAHKRQNARDQYADV
WSIEEEGYRNYNTSDDLQRAKLVDIIEHPEKSDKDSSSAYNTAESCRSTPLTVGQSPDNS
LQRLINITNKKNLRSTIAANQMTARQDSKETCLAKTKSSDSSAEQQDNAPESNKLTEHER
SSIPQIPYLSPCHSSQYRHTNIPTHARHYQSYMHLIQQKSAVEYAQSQLSLVSMCKDLQK
STEPKMEWKVKVRSDGTRYITKRPVRDKILKERALKIKEERSGMTTDDDTMSEMKMGRYW
SKEERKQHLMRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEVNIIELSHKKMMKKRNK
KILDNWMTIQELMTHGAKSPEDPQVHNAFLSVTTV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgacttggatcggtttgcagaagacgtggaccctgacttaaaatgcaagctg
tgcacaaaggttctggaggagccgctgtccaccccgtgcggacacgttttctgtgctggc
tgtttgctaccttgggcggtacagcagagactctgcccgctgcagtgccagtccatctgt
gctaaggaacttcaccaggtccttccactgaaaaatctcatccagaagctggacatcaga
tgtgattatcatgccaggggctgtgcaaagacagtcaaactgcaggaattgagagatcat
gtagaaatgtgtgattacagtccagcccagtgcaggaataagggctgcaaagaggtgctc
aatttaagagacatggactctcacatgagggagagctgcgattacagacccgtaggaatc
tgtcagaaagggtgcggattggtactgctccataaggacctgatccagggaaatcactgc
tgtctccgggcactgagagcccagaatggggcgctacaggtaaaaacgtccagcttggag
aaagacacgaagaagcaggctgtcaaatggagtaaacgagaaaaatcgttgctggctcag
gtatcagcacttcaaaatgaagtgcaactcactgcactgaggtaccagaagaaatttaac
cagtatatgatccacatcaacaacattactaaatatgttgcaagccactgcaagggagga
gaacaaaaaacacttaatatagttcttcatagagaaagtgagagtctgggattcaatatc
attggaggaagaccgtgccagaatcaggaagattctactgccgaaggaatttatgtttca
aaaatcttgaaaaatggcccagcagacagagcagatggacttcaagttcacgacaggatt
gtggaggtcaatgggagggatctgttgaaggccacgcacgaggaagcagtagaagccttt
cgcagtgccaaggaaccaattgtagttcaagttttaagaagaactcccatcacaaagaat
catgggacatctcaggaaatccatctggtggatgtttgcactcagacagacattactttt
gaacacattatggctctctccaagttaaggccatcaactcctcccgtacctgacatctgc
cccttcctgctctctgacagttgtcactcactacatccaatggagcatgaatattatgaa
ggaaacgagtttctctcgagcatgcctgctgatgcagaccggacagaggagtttgagtat
gaggaagttgaactgtgccgtgtcaacagccaggagaagcttggacttaccttgtgctat
aggactgatgatgacgaggatatgagcatctatgtcagcgaggttgggccaaacagcatt
gctgccagagatggtcgtatcaaagaaggggatcgaattttacagataaatggtcatgac
gtccagaatcgtgaagaagcagtggcattactctcaagtgaagactgccgaaatattgtg
ctgctggttgccagaccagaaatacagctggacgaaggctggctggatgatgagagaaat
gaattcttagaagagctgaacatggagatgttgaaggaacaacaccacgaagcaatgcag
tacacagccagcgagctggagcagccaaagaaaagtgaggaagatggtggaacgacagac
acggccaccacctcatccaacacccaggagaaggacagcggggtgggccgcaccgatgac
agtgtgcgcaacgatgagagctctgagcaggagaacctgggggacagccaaaagcaagtt
tcgctgcaggacaaacgagagctgggccagagtcaggacacgctggtgagcaatgagatg
ccgtgtaacgagagctgtgtgtctggtgaatatatcgactcggactgcactgcagcccag
gacgaggactgcgagaggttccgccagctgctgaagctcaaatgcaagataagaaacagc
ggcgagtatgacctttactacagccgcagcagtaccatcgaatgcagcctcaaggaacca
aatggggtagaacgggagctacagctgctcaacgaagagctccgtaacattgagctggag
tgccagaatatcatgcaggctcacaagcgtcaaaatgcaagggatcaatatgctgatgtc
tggtcaatcgaagaggaaggctatcgaaattataacaccagtgatgacttgcagagagct
aagctagtggatatcatagagcacccagaaaaatcggacaaggacagctccagtgcgtac
aacacagcagagagctgtcgcagtacgccactgacagtgggccagtcaccagataactcc
ttgcagcgactgatcaacattacgaacaagaagaacctgaggagtaccattgcagcaaac
caaatgactgccagacaagacagcaaagagacatgtctggctaaaactaaaagttcagac
agttcagcagagcagcaggataatgcacctgaaagcaataaacttactgagcatgagagg
tctagtattccacagattccgtatctttcaccatgccacagttcccagtacagacatacc
aatatacccactcacgccaggcactaccagagctacatgcatctcatccagcagaaatct
gccgtggagtacgcccagagccagcttagccttgtgagcatgtgcaaagacttgcagaag
tctacagaacctaaaatggagtggaaggtcaaagtccgtagtgacgggacgcgatacatc
acaaagaggccagtgagggacaaaattctgaaagagcgtgccttgaagatcaaagaggag
cgcagcggaatgacgacagacgacgacacaatgagcgagatgaagatgggcaggtactgg
agcaaggaggagaggaagcagcacttgatgagggccaaagagcagaggagacgacgggag
ttcatgatgcgcagcagactggagtgtctcaaggaaagccctcaaagtggtagcgaaggg
aaaaaggaagtaaacattattgaactgagccacaaaaagatgatgaaaaagcggaataag
aaaatcttagacaattggatgacaatccaagaactgatgacccatggggccaagtctcct
gaggacccacaagtacacaatgccttcttgtctgttactactgtataa
DBGET
integrated database retrieval system
