Acipenser ruthenus (sterlet): 117415495
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Entry
117415495 CDS
T07327
Name
(RefSeq) transcription factor SOX-5-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117415495
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117415495
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
MATalpha_HMGbox
Pox_F17
MHB
Motif
Other DBs
NCBI-GeneID:
117415495
NCBI-ProteinID:
XP_033881842
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All DBs
Position
7:complement(22388173..22508821)
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AA seq
774 aa
AA seq
DB search
MLTDPDLPQEFKRMSSKRPASPYGGTDGEVAMATSRQKLEDKESDGLPVIHLPLNSSYSS
KLHSEEFQSVNSLTRENFGLDSPTSLHSSMEQDGIKGPSLSPYAQQNSSTSPTKTEDGAR
QGSDSGSSNALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLL
AMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQM
ELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRALAAAAAQQ
GFLLPPSFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGQLQLQQLYAAQLAAMQVSPGAK
LPGMPHTNLGNIHSPTNIQTEKCRSTPPLKSKEEGAQPLNLSSKPKTTESKSPTSPASPQ
VPSMKMNTGSMKHSFQASLASPSSRMNSIDLLSSITSGGYLNDHDAVNKAFQEARQMKEQ
LRREQQVLDAKVAVVNSLGLNNGRTEKEKAALESLTQQLAAKQSEDGKFNHAMMEFNMSG
DSDGSPSVSDSRMFREARGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI
LGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKTIM
RNRRQEMRQYFTVGQQGQIPISSSGVVYPGAIAMAGMPSPQIPSEHSSMSSSPEPSIPVI
QSTYLHNMKTEETRVKEEMHMDDSNGNVYDDFEYEDEDADYGSDSENHIAAQAD
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgatcctgatttacctcaggagtttaagaggatgtcttccaagcgaccagcc
tctccatatgggggaacagatggagaggtagccatggcgacaagcagacagaaattggaa
gataaggagagtgatgggctcccagtcattcacctacccctgaactccagttattccagc
aagcttcattcggaggagtttcagtctgtaaactctttgaccagggaaaatttcggcctt
gacagtcccacttctctccacagctcaatggaacaagatggcataaagggtccgtctctg
agtccatatgcgcagcaaaactcatctacctcaccgactaagacagaagacggggctcgt
cagggcagcgactcgggctccagcaatgctctggggaccccagagagacgcaagggcagc
ctggccgatgtggtggacacactgaaacagaggaaaatggaggagcttatcaaaaacgag
cctgaggaaacccccagcattgagaagcttctatcaaaagactggaaggacaagcttctt
gccatgggatcagggaactttggagaaattaaagggacgccagaaagcctagctgagaag
gagaggcagctcatgggcatgatcaaccagctgaccagcctgagggagcagctgctggca
gcccatgatgaacagaagaaacttgcagcgtctcagatcgagaaacagaggcagcaaatg
gagctggccaaacagcaacaggatcaaattgcaagacaacagcaacagctcctgcagcaa
caacacaaaatcaaccttcttcaacaacagatccagcaggttcagggtcagttgcccccg
ttgatgatcccagttttccctccagaccagagggcgttagcagcagcggcagcccagcaa
ggattcctcctgcccccaagcttcaactacaaacctggatgcagtgacccttaccctctt
cagctgattcctactaccatggcagctgctgccgcggcaaccccaggcctcggccaactc
cagctgcagcagctgtatgcggcccaacttgctgccatgcaggtatctccaggggccaaa
ctgcctggcatgccccataccaacctgggaaacatccactcgccaaccaacatccaaaca
gagaagtgcaggagcacccctccactgaaaagcaaggaggagggtgcacagccactgaat
ctgtcgtccaagcccaagacaacagagagcaaatcaccaacatcccctgcttccccacag
gtccccagtatgaaaatgaacacaggatccatgaaacacagtttccaagcctcactcgcc
agcccttcctccagaatgaactcaatagatcttctttcctctatcacctccggtggttac
ttaaatgaccatgacgcagtcaacaaggcttttcaggaagccaggcaaatgaaagagcag
ctcaggagagagcaacaggtgctggatgcaaaggtggctgtagtcaacagtctgggtcta
aacaatggcagaacagaaaaggagaaagccgctttggaaagtctgacacagcagcttgca
gcaaaacagtctgaagacgggaagttcaaccatgccatgatggagttcaatatgagcgga
gactcagatggaagccctagtgtgtccgattcaaggatgttccgagaagccagaggcaga
ggaagcagtgagcctcatatcaaacggcccatgaatgccttcatggtttgggcaaaagat
gagaggagaaaaattctacaggccttccctgacatgcacaactctaatatcagcaaaatt
ctggggtctcgctggaaatccatgacaaacttagaaaagcagccttactatgaggaacag
gccaggcttagcaaacaacatctggagaagtaccccgactacaagtacaaacccaggccc
aagcgcacctgcctggtcgatggcaagaagctaaggatcggggaatacaaaaccatcatg
cgcaatcgacgccaggagatgaggcagtactttaccgttgggcagcaaggtcagatcccc
atcagctcatcaggagttgtgtaccccggagcgattgcaatggcagggatgccctccccc
cagatcccctcagagcactccagcatgtcgagcagcccggagcccagcatccccgtcata
cagagcacttacctgcacaacatgaagacagaggagacccgggtcaaggaggagatgcac
atggatgacagcaacggaaatgtgtatgatgactttgagtacgaggacgaagacgcagat
tacggcagcgacagtgaaaaccacatcgctgcacaagctgactga
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