Acipenser ruthenus (sterlet): 117415654
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Entry
117415654 CDS
T07327
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117415654
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
117415654
NCBI-ProteinID:
XP_034778038
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All DBs
Position
7
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AA seq
531 aa
AA seq
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MSSTLGKDSKEKDPKGPSGKEREKEAKALGSFSKDGKETKTKGKDAKEGKKDSSGAPPGV
AFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREETSTRLDLSKRSIHMLPTSIKELTQ
LTELYLYSNKLQSLPAEVGCLAGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREI
PLVVYRLPSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLD
VAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPKSLA
KCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEH
NRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGL
VSLEVLILSNNLLRKLPHGVGNLRKLRELDLEENKLETLPNEIAYLKDLQKLVLTNNQLT
TLPRGIGHLINLTHLGLGENLIQHLPEEMGFIFHYTNCFIFHYTTPPRGDR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacattaggcaaagactcgaaagaaaaggaccccaaaggtccttcgggaaag
gaaagggaaaaggaggccaaagccttgggcagcttcagtaaagacggcaaggaaaccaag
accaaagggaaagatgccaaagaaggaaagaaggactctagtggggcaccacctggggtg
gccttttctgttgataacacaataaaacggccaaacccagcagcaggtacccgcaaaaaa
tccagcaatgctgaggtgatcaaagagctgaataagtgcagggaggagacctccacgcgg
ctggacttgtccaagaggtctatacacatgctccctacgtcaatcaaggagctgacgcag
ctgacggaactgtacctgtacagcaacaaactgcagagcctgcccgctgaagtaggctgc
ctggcaggcttagtgacgttagccctgagtgagaactctctcaccagcttgcccgactcg
ctggacagcttgaagaaactgagaatgctggatctccggcataacaaactgcgagagatc
ccgctggtggtgtaccggcttccttccctcaccaccctctacctgcgctttaaccgcatc
actactgtggagaaggatatcaaaaacctgtcgaaactcaccatgctgagcatccgtgag
aacaagattaaacaactccctgctgaaataggggaattgtgtaacctcattacgctggat
gtagcgcacaatcagcttgaacaccttccaaaagagattggaaattgcacacagataact
aatcttgatttgcagcacaatgagcttctggacctccctgaaactataggtaacttgtca
agtctaaatcgcttgggtctgcggtacaacaggctgtctgctatccctaaatcattagct
aagtgcagagaattggaagagctgaaccttgagaacaacaatatttcagtgttaccagag
ggtctcctgtctagcctggtcaatttgaccagtttaacactggccagaaactgcttccag
tcctatcctgtaggcggtccgtcacagttttctactatatattccctcaacatggagcac
aaccgcatcaacaaaatcccctttggcatcttctctagagccaaagtgttaagtaagctg
aacatgaaggacaatcagctaacctctctgccacttgattttgggacctggaccagtatg
gttgagcttaatctggccacaaaccagctgactaagattcctgaggatgtgtgcggtctt
gtttcacttgaggttcttatcctgtcaaacaatctcctacggaagctgcctcatggcgta
ggtaacctacggaaattacgagagttagacttggaggaaaataaactggaaactctccca
aatgaaattgcttacctgaaagatttacagaaactggtcctgactaataatcagctgaca
accctccccagggggattggacatctcatcaacctgactcacctgggactgggagagaac
cttatacaacacctccccgaggagatgggttttatatttcattatacgaactgttttata
tttcattatacgacacctccccgaggagatcggtaa
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