Acipenser ruthenus (sterlet): 117415708
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Entry
117415708 CDS
T07327
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117415708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117415708
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117415708
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Ortholog
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
117415708
NCBI-ProteinID:
XP_033882279
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All DBs
Position
7:52957532..53137395
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AA seq
1291 aa
AA seq
DB search
MLAITDGNISEGINSILFMSNTINDNIKPDSVYISKMDATVILYSGDVNCDTSNGQRMWW
AFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNVKNKEAQKINSGAGIQADGSPKNADE
KEESPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSDTSSPIE
SCQNFYKDITLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYL
NRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLLSIFISTWLTAAGFIHLVENS
GDPWENFQNYQPLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYV
PEIIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLH
NISPNLELEALFKRHFTQVEFYQGSVLNPHDLARLKIEQADACLILANKYCPDPDAEDAS
NIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCL
AQGLSTMLANLFSMRSCIKIEEDTWQKYYLEGVSNEMYTEYLSSAFVGLSFPMVCELCYV
KLKLLLIAIEYKSDKRESSILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDI
TDPKRIKKCGCKRSKMSIYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLERAFPLSSV
SVNDCSTSLHAFEDEHPSTLSPKKKQRNGGMRNSPNSSPKMMRHDPLLIPGNEQIENMDA
NVKKYDSTGMFHWCPSKDIEKAILTRSEAAMTVLSGHVVVCIFGDVKSALVGLRNLVMPL
RASNFHYHELKPIVFVGSLEYLRREWETLLNFPKVSILPGTPLSRADLRAVNINLCDMCV
ILSANQNNIDDASLQDKECILASLNIKSMLFDDSIGVLQANSQGFTPPGMDRSSPDNSPV
HGLVRQASITTGANIPIITELAKPVKTLPLVSFSQEKNCGTNIQMITELVNDSNVQFLDQ
DDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLL
AEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFG
IYRLRDAHIGTSSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSS
HSSSKKSSSVHSIPTANRQNRTKTRDSREKQNATRMNRMGQEKKWFTDEPENACPRNIQI
KPMSTHMANQVNQYKSTNSLIPPIREVEDEC
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgctagctatcacagatggcaacatttccgaaggaatcaacagcattctattcatgagt
aatactatcaatgacaatataaagccggactccgtgtatatatccaagatggatgcaact
gtcatcctttactctggagacgtgaattgcgatactagcaatggccaacgtatgtggtgg
gctttcctcgcttcatccatggttactttcttcgggggtctctttatcattcttctctgg
aggaccctcaagtacctgtggactgtttgctgccactgcaatgttaaaaacaaggaagcg
cagaagattaacagtggcgctggtattcaggctgatgggtctcctaaaaatgcagatgaa
aaggaggagagcccagcgagtgaagtgggctggatgacgtcagttaaagactgggctggg
gttatgatatctgcgcaaaccttgacaggcagagttcttgttgtcttagtctttgctctc
agcattggtgcacttgtaatatactttatagattcttctgatacatcaagccccatagaa
tcctgtcagaatttctacaaagatatcactttacagatcgacatggctttcaatgttttc
ttcttactgtactttgggctgcgttttattgcagccaatgataaattatggttctggctg
gaagtaaactcagtggtagatttctttactgtgccgccggtgttcgtgtccgtatattta
aacagaagttggcttggtttgaggtttctgagagcgttaagattaatacagttctcagaa
attttacagtttttaaatatcttaaaaactagtaattccatcaaactggttaacctgctg
tcaatatttataagcacatggctcacggcggcggggttcattcatttggtagaaaactca
ggagacccttgggaaaacttccaaaattaccaaccacttagttattgggaatgtgtttat
ttactaatggttactatgtccactgtgggttatggagatgtttatgcaaaaaccactctt
ggacgcctattcatggtcttctttatcctcggtggtctggccatgtttgccagctacgtc
cctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagtgcagtt
aatggaagaaagcacatagtggtctgtggtcacatcacacttgaaagtgtatccaacttc
ctcaaagacttcctgcacaaggacagggatgatgtcaatgtagaaatagtttttctccat
aatatctcccctaatcttgagctggaagccttatttaagaggcactttactcaggtggaa
ttttaccagggatcggttctgaacccccatgacttagccagattgaagatagagcaggca
gatgcatgtctgatcctcgctaataaatactgtccagatcctgatgctgaagatgcctcc
aacattatgagggttatttctattaaaaattatcatccaaagatacgaatcatcacacag
atgttacagtaccataataaggcccatctgttaaacattccaagttggaactggaaagaa
ggggatgatgcaatctgccttgctgaacttaaactgggcttcatagcccaaagctgcttg
gctcaaggcctctccacaatgctagccaacctcttctccatgaggtcatgtatcaagatt
gaagaggacacttggcagaaatactatcttgaaggagtttccaatgaaatgtacacagag
tatctatccagtgcctttgtgggtttatccttcccaatggtctgtgaattgtgttatgtg
aagctgaagttgttattgatagccattgaatacaagtccgacaaaagggaaagcagtatc
ctcatcaaccctgggaaccatgtaaagatgcaagaaggtactttaggattctttattgcc
agcgatgccaaagaagtgaaaagggcatttttctactgcaaagcttgtcatgatgacatc
acagatcccaaaaggatcaaaaagtgtggctgcaaacggtccaagatgtccatctacaaa
agaatgaaactggcatgttgttttgattgcggacgctctgagcgtgactgctcttgcatg
tcaggcagtgtacatagtaacatggacacccttgagagagccttcccactttcttctgtc
tctgttaatgattgctcaaccagtttacatgccttcgaagatgagcatccatcaacactg
tcaccaaaaaaaaagcagcggaatggaggcatgcgaaattcacccaattcttcgcccaaa
atgatgagacatgatcccttgctcattccgggaaatgaacaaatcgagaacatggatgct
aatgtgaaaaaatacgactccactgggatgtttcactggtgcccatccaaagacattgag
aaggctatcctgacacggagtgaagctgcaatgacagttttaagtgggcatgtggtggtc
tgcatatttggagatgtcaagtctgcactagtggggttacggaatcttgtgatgccttta
cgagcaagtaatttccactatcatgaactgaagcccattgtgtttgtgggctctttggaa
tacctaaggcgggaatgggaaacgctactcaatttccccaaggtttcgattttaccaggt
acaccgttaagtagggctgacttaagggctgtcaacatcaacctgtgcgacatgtgcgtg
atcctgtcagccaatcagaacaatatcgacgatgcttcgctgcaggacaaggaatgcatc
ttggcatcactcaacatcaaatctatgctgtttgatgacagcattggggtcttgcaggct
aattcccaaggttttacaccacctgggatggatagatcctctcctgataacagcccagtt
catggtttagttcgacaggcttccataactacaggagccaacatcccaattattactgaa
cttgctaaacctgtcaaaacactgcccttggtttcattcagtcaggaaaaaaactgtgga
accaacattcaaatgataactgaactggtaaatgactccaatgttcagtttttggaccaa
gatgacgatgatgatcctgatacagaactgtatcttactcagccttttgcttgtgggaca
gcatttgccgtcagtgtgttagattccttaatgagtgcaacatacttcaatgataatatc
ctcacattgatacggacattagtgacaggcggagctacaccagaactagagggtcttttg
gctgaagaaaatgcgctacgaggtggctatagcacaccacagacacttgcaaatagggac
aggtgtcgtgttgcacagttagcactgtatgatggtccctttgcagacttgggggatggt
ggctgctatggtgacctattttgtaaagcattaaaaacatacaacatgctgtgctttgga
atttaccgattaagagacgcacatataggtacaagtagccaatgcactaaacggtatgtt
attaccaaccctccatatgagtttgagcttgtcccaacagacctcatcttctgtttgatg
cagtttgaccacaacgcaggccagtcacgggcaagtttatcacattcttctcattcgtcc
cactcgtccagcaagaagagctcttctgtccactctatcccaacagcaaataggcaaaac
cgcaccaagaccagggattcgcgagaaaaacagaatgcaacaaggatgaatagaatgggc
caagaaaagaaatggtttacagatgagccagaaaatgcctgtccacggaacattcaaatc
aagcccatgagcactcacatggccaatcaagtaaatcaatataaatctacaaacagcctg
attccaccaatcagagaagttgaagatgaatgctga
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