Acipenser ruthenus (sterlet): 117415750
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Entry
117415750 CDS
T07327
Name
(RefSeq) uncharacterized protein LOC117415750
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117415750
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117415750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117415750
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117415750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
SHLD2_C
SHLD2_OB1
RHD_dimer
SHLD2_OB2
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
117415750
NCBI-ProteinID:
XP_034778027
LinkDB
All DBs
Position
7:56546247..56576790
Genome browser
AA seq
1729 aa
AA seq
DB search
MEGKQGIHIFLGAPIFPKEKGTPGAGTPVEETSENWNSIELYCREGKLHPASELREGGAI
AGDARICWSKRAAGYVCNHSDRLSVNQTRPSSEPSRQNESCSPSETGKEAARQGTEGTGA
LRSQTVSGRKRLVNRSQELPGDAITEYLDSCFPEGADPGTAEQELSPQTEFLSVWAASQA
AILKGLLASECGESPEVQKEETVSGPAPELHTPMRVQNSTPGVIPGAPQPGRAPPEEPHT
AEGSEELFSAPGELLPRGEGGVVMEMCSTALLCSQEEPPHQDGDPTENRRETEEGASKPT
APSPPATAPESKKTRTSLSNRKVRRGLRETMGLPGKPALLRSCVDQAQRYKVLACVLNPC
HLKEVRVRSGTSAGSAVPLATIVVTDQSGTERKVVLWRAAAFWALTVYPGDLVVITDVSV
KEDQWRGETVLQSTPASKLLNLGQFFNINHERVPGYVDRVTLAELQGYLRERHPHLLSVP
SRAPQSPHSIRHTRLGVLRANTLVHALLRVTRISTLTVPVYSYRGQSLRKVVLSVEQGDG
QRGALVLWGGATAWLPRIQRKRALVWDFRCLLVRWGSVSGFLELHSTPWGSCEPLFPDDP
RALEFWSWADPERCETDLQTLLSLRHSGEVVVKAHITALQFTGGTSHNARLLMDGDTPLQ
RIVGLVTDDITFVGCGRCGSELGVDDNRIYQLCYPCLPHTGVKRYYRPAVMTVTDGDSVI
SVEVPPVLVEQIFLNIPAEQLNKPAVPSSQLSFSQVVSEMCLSLLSHPADTFLLTLRSSF
LLDENSIPLRQHFLLLDFHPELCPGKICQQKKISLGTDLLESRMDDLLIDGELTYEDLST
YNFIPAISSIHVKAEPYLETANGPYLSIIEEPKQRGFRFRYECEGPSHGGLPGASSEKNK
KTYPTVKIYNHVGYARVEVQLVTHSDPPRVHAHSLVGKQCSEHGVCSVNVGPNDLTAQFN
NLGILHVTKKGVNEVLTKRLTAERRRQKGDDAVITEQEEKEIANEARELGKVMDLNVVRL
KFTAYLQDSNGGFTLALKPVISQPIYDSKSPNASNLKISRMDKTSGSATGGDEIFLLCDK
VQKDDIEVRFYEDDDNGWEAYGDFAPTDVHKQYAIVFKTPPYRRNQIDRPVTVFLQLKRK
KGGDASEPKQFTYHPQIQDKEEVQRKKLKPLPHYQDHYGRGGAGGPPGGFGAGGAGGGGG
GFYPFPHSVNSSFSYNPMGGGYQGGTQMPGAAQRQDSPASSGAPQGGLTPQQQLIQIASL
LQSKATLTARRTARALLDYASTGDARMLLAVQRQLCGVQDENGDTPLHLAIIHQQASVVE
KLVQVIVSIPDQRILNQINHLRQTPLHLAVITKQHKIVDFLLKAGADPTPLDRYGNSVLH
LATPTGDEQMLRILLSHLKPHSRYLLNTPDYNGLYPLHLAVQKSGEQCLRMLVDAGAEVN
AVERKSGCTALHLAVQQDLFAVACLLITELNADVNVCSFGGNTPLHLAASQGSPVLCSML
IAAGAERLVENDEPVCMSSGSLSEEEREETQEEESSGGEGAEIAQTHTARPHSLASNPRK
RPPMRGHTPLDLAKNQKVQDILEGKPRRPGKTPTKLKTAPLAGTVCPLDRDTLDSDTLAR
LSTALSAGEVQWKQLAEKLGMRTLADLYEECPSPCHSLLQGYQVAGGRVECLIDALQALG
LNEGVRVLREAGLKDKTHTTEVKVDSGYDSQLTEQLEQEKMDESVPANS
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaaacagggaatccacattttcctcggcgctccaatattccctaaggaaaag
ggaacgccgggagcagggactcccgtggaggaaacttcggaaaactggaacagcattgag
ctttactgccgagaagggaaacttcaccccgcctctgagctgagagagggaggagccatt
gcaggggatgcaaggatctgctggagcaaaagagccgctggctacgtctgcaatcattca
gacaggctgagtgttaaccaaacaagaccatccagcgagccatcccgccaaaatgaatcc
tgctccccttcagaaacggggaaggaagcagcgcggcaaggaactgaaggaacaggagcc
ctgcgttcccaaacggtttccgggagaaagcgtctggtcaaccgcagtcaggaattgccc
ggcgacgcaatcacagaatatctggacagctgctttcctgaaggtgcagatccagggaca
gctgagcaggaactgtccccgcagacggaattcctcagcgtgtgggccgccagccaggcc
gccatcttaaaggggctgctggcatcggagtgcggggagagccccgaggtccaaaaggaa
gaaaccgtctcaggaccagccccagagctgcacacccctatgagagtacagaactcaacc
ccaggggtcattccgggagcgccccagccaggcagagcccccccagaggagccccacact
gcggagggctcggaggaactcttcagtgcccctggcgagctgctgcctcggggggaggga
ggcgttgtgatggagatgtgctccacagcgctgctctgctctcaagaagaacctccccat
caagatggtgatcctactgagaatagaagagagactgaggagggggcctccaaacccaca
gcccccagtccccctgccactgcccctgaatccaagaaaaccagaacctccctttccaac
cgaaaggtaaggaggggcctgagggaaaccatgggcttgcctgggaagcctgccctgctg
aggagctgcgtggaccaggctcagcgctacaaggtcctggcctgtgtgctgaacccctgc
cacctgaaggaggtcagagtgagatcagggacgtccgccggctctgctgttcccctggca
accatcgtggtgacggaccagtcagggacggagaggaaggtggtcctgtggcgggcagcg
gctttctgggctctgactgtgtaccccggggacctggtcgtcataacagatgtgagtgtg
aaggaggaccagtggagaggggagacagtgctgcaatccactccagccagcaaactactc
aacctgggccaattcttcaacatcaaccatgagcgagttccaggatatgtggacagagtc
accctggcggagctgcaggggtatttgagggagaggcacccccacctcctctccgttccc
tccagagccccccagagtccccacagcatccggcacacccgtctgggggtcctgagagct
aacacgttggtccatgcgctgctgcgagtcacacgcatctccacactcaccgtgccagtg
tattcctacaggggacagtctctcaggaaggtggttctgagtgtggagcagggagatggc
cagcggggggcactggtgttgtggggaggtgctaccgcctggctgccgcgcattcagagg
aagagagcgctggtgtgggatttccgctgcctgctggtacggtggggctctgtttcgggg
ttcctggagctgcactccaccccctggggctcgtgcgagcctctcttccccgatgaccct
cgggccttggagttctggagctgggccgatccggagcgctgcgagacagacctgcagact
ctgctctccctccgacactcaggggaggtggtagtgaaggctcacatcactgctctgcag
ttcacgggcggaacctcccacaatgcccggctgctgatggatggagacacgcccctgcaa
aggattgtgggattggtgactgatgacatcacctttgtagggtgcgggaggtgtggctcc
gagctgggagtcgacgacaacagaatctaccaactctgctacccctgcctgccacacact
ggagtgaagcggtattacaggccagcagtgatgacggtgacagacggggacagtgtaatc
tcagtggaggttccccccgtgcttgtggagcagatcttcttgaatattccagcagaacag
ctcaacaagccagcagtcccctcctctcagctctccttctctcaggtggtgtcggagatg
tgcctctctctcctctctcacccggctgacaccttcctcctgaccctgaggagcagcttc
ctattggacgagaacagcatccccctccgacagcacttcctgctgctggacttccacccg
gaactctgcccgggtaaaatttgccaacagaagaaaattagtcttggcacagacttactg
gaaagcagaatggacgatctattgatagatggcgaactgacttatgaagatttatccacg
tataattttataccggcaatctcaagcatacacgtcaaagcagagccgtacctggagaca
gctaatggtccctacctttcaataattgaagagccaaaacagagaggatttcgttttcgg
tacgagtgcgagggtccctctcacggagggctgcccggggcgtccagtgaaaagaacaag
aagacctaccccactgtcaagatctataaccacgtgggctatgccagggtggaggtgcag
ctggtgacgcactcggatccgccccgcgtccacgcgcacagcctggtggggaagcagtgc
agtgaacacggggtgtgcagcgtcaacgtggggcccaacgacctcactgcacagttcaat
aacctgggtatcctgcacgtcacaaagaagggggtgaatgaagtgctgaccaagaggctg
acggcggagaggaggaggcaaaaaggggacgacgcggtcatcactgagcaggaggagaag
gagatagctaacgaggctcgggagctgggcaaggtgatggacctgaacgtggtgaggtta
aagttcacggcatacctgcaagacagcaacggggggttcaccctcgccctgaaacctgtc
atctcccagcccatctacgacagcaagtctcccaacgcgtcgaatctaaagatctctcgc
atggacaagacgtcgggctctgcgacaggaggggacgagatcttcctgctctgtgacaaa
gtgcagaaagatgatattgaggtgcgcttctatgaggatgatgacaatggctgggaggca
tatggagacttcgcacccacagacgtgcacaagcagtatgccatcgtgttcaaaacccct
ccctacaggaggaatcagatagatcgccccgtcaccgtgttcctgcagctcaaacgcaag
aaggggggtgacgccagcgagcccaagcagtttacataccacccccagatacaagacaaa
gaggaggttcagaggaagaagctgaagcccctccctcactaccaggaccactacgggcga
ggtggggctgggggtccgccggggggtttcggagcagggggggcaggaggaggaggcggt
ggtttttacccctttccccattcagtgaactccagcttctcttacaaccccatgggggga
ggataccaggggggcacccagatgcctggagcagcgcagcgacaggactcccctgctagc
agtggggcccctcaaggggggctgaccccacagcagcagctcatacagatcgcatcgctc
ctccagtccaaggccacactgacggccagacgcacggcccgcgctctgctcgattacgcc
agcacgggagacgctcgcatgctgctggctgtgcagagacagctgtgcggggtgcaggac
gagaacggggacactcctctgcacctagccatcattcaccagcaggccagcgtggtggag
aagctggtgcaggtcattgtgagcatcccagaccagaggatcctgaaccagatcaaccac
ctgagacagactcctttgcacctggctgtgatcacaaagcagcacaagatcgtggacttc
cttttgaaggcaggggctgaccccaccccactggatcgctatggcaactcggtgctgcac
ctggctacgcccaccggcgacgagcaaatgctgcggatactgctgagtcacctgaaacca
cacagccgctacttgctcaacacacctgactacaatggtctctacccccttcaccttgcg
gtgcaaaagtccggtgagcagtgcttgcgcatgctggttgatgccggtgcggaggtgaat
gcagtggagaggaagagtggctgcactgccctgcacctggctgtacagcaggacctcttc
gctgtggcctgcctactcattacagagttgaacgctgatgtgaatgtctgctcattcggt
gggaacacccccctgcacctggctgccagtcagggttcccctgtgctgtgctccatgctc
atcgctgcaggtgccgagaggttggtggagaatgatgagccagtctgcatgtcctctggg
tccttatctgaggaagagagggaggaaacacaggaggaggagagcagtgggggagagggg
gcagagatagcacagacccacaccgcacgcccacacagcctggcctctaaccctcgcaag
agaccccccatgcgaggacacacccccctagacctggccaagaaccagaaggtgcaggac
atcctggaggggaagccgagacgaccagggaagacccccaccaagctgaagaccgccccc
cttgcaggtactgtctgccccctggacagggacaccctggacagtgacaccctggcccgg
ctcagcactgccctgagtgcgggggaggttcagtggaagcagctggcagagaagctgggc
atgaggaccctggctgacctgtatgaggaatgcccttccccctgccacagcctgctgcag
ggctaccaggtggcgggaggccgtgtggagtgcctgattgatgctctgcaggctctgggt
ctcaatgagggagtgagggtgctgagggaggccgggctcaaggacaagacccacaccaca
gaggtgaaggtggacagtggctatgacagtcagttgacagagcagctagagcaagagaag
atggacgagtctgttccagccaactcctga
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integrated database retrieval system
