Acipenser ruthenus (sterlet): 117415843
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Entry
117415843 CDS
T07327
Symbol
parpbp
Name
(RefSeq) PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117415843 (parpbp)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117415843 (parpbp)
TLS (translesion DNA synthesis) factors
Other TLS factors
117415843 (parpbp)
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Gene cluster
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
117415843
NCBI-ProteinID:
XP_033882582
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All DBs
Position
7:24694291..24712958
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AA seq
598 aa
AA seq
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MMTSLQQNLQTMVKVFRRECHRVLESQRTTICGADEMLMVLQLSMAEINKEENGEFTVLL
SNLLVTWQHLMKDKLHLLHETSDAPENYNAIRKMYNSFLKSSNIVDLIDVYEMYDTLKTE
RDCEELLTPVQLLEFLSGNSDSCNVADVVIPPVPATPSNRQSQKHSKLPTVVICAYLKLL
VNSKNDLAVAHVLNIPDRGLGRGAFTDLKHAAHNTQTSLFLAATSFIRAIQLGGKGYAPS
ETDPLRKHLKGLSDFVHFTDNLEELLGEIPDPSFAGSRIMSTIKARLLKGRSSEDPLCAA
AEETVQELRLRIKNIIHSQKEATNASAIGISPARPKCYAINHSTAYGGRETVKVLLHLLD
EEATSPPSRNKADLLYGDEGDMAEAGVSCILTLFRSPEPSTGSSPKSLRYRVLEHEGKTT
PKAKGNPIRSQFACTYHDDPLVNKKLLQFPSLSQVPTCVHPAPKKALVPVLCFDDEPSTA
NVTENEALIIERKRPAFGSTSGNTQQKGNSRKKGSGSANGQPGNKSCKRKQAYVNGENAN
CSHENEPPQKRAAGGPKVSDKPHNKLDCKTGAPGKGSKAVAKKKLIAGQGKLTNFFRL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgtcccttcagcagaatctacaaacaatggtaaaagtgttcagaagagaatgt
cacagagttttggagtctcaaaggaccactatctgtggtgcagacgagatgcttatggtc
ttacagctgtctatggcagaaataaacaaagaggaaaatggagaatttacagttttgctg
agtaatctacttgtaacctggcaacacctgatgaaggataaactgcacttgctgcatgaa
acttcggatgctccagagaattacaatgctataaggaaaatgtataattctttcctgaag
agcagtaatatagtagacttaattgatgtctatgaaatgtatgatacacttaaaacagag
agagattgtgaagaattgctcacacctgtgcagctattagagtttctctctggaaattca
gattcttgtaatgtggctgatgttgtcattcctccagttccggcaacaccatccaacagg
caaagtcagaaacattcaaagttgccgacagtggtaatctgtgcatatttaaagttgttg
gtgaactccaagaatgatctggccgtggcccatgtgctaaacattccagaccgaggtctt
ggaaggggcgccttcactgatctaaagcatgcagcacacaacacgcagacgtcccttttt
ttggctgcaacatcattcatcagagccatacagcttggcggaaaaggttatgctccttca
gagacggatccactaaggaagcatttgaaaggactttcagactttgttcacttcacagac
aatttagaagaactacttggagaaattcctgacccgagttttgcagggagtcggatcatg
tccacaattaaggcacgcttgctaaaaggcagaagcagtgaggatcccctctgtgcagca
gcagaggaaacggtacaagagctgagactaagaattaagaatatcatccattctcaaaaa
gaagcgaccaatgcaagcgccatcggtattagccctgcacggcccaaatgttatgccata
aaccattccacagcatatggtggtagagagactgtgaaggtcctacttcacttgttggat
gaagaggcaacaagtcccccaagtagaaacaaagctgacttgctgtacggggatgaggga
gatatggctgaggctggagtatcctgcatcttaacgctgtttaggtcccctgagccatca
actgggtcatctccaaagtcactccgatatcgtgtactagagcatgaggggaaaacgaca
ccgaaggcaaaagggaatccaattagatcacaatttgcctgcacgtaccatgatgatccc
cttgtaaacaaaaaactgctgcagttcccaagtcttagtcaagtgccaacctgtgtccat
cctgcgcctaaaaaagctctggttccagttctctgctttgatgatgaaccttcaacagca
aatgtgactgagaatgaagctctaataatagagagaaagagacctgcgtttggctccact
tctggaaatactcagcagaaaggaaactcaaggaaaaagggcagtggaagtgcaaatggt
cagccaggaaacaagagctgcaagaggaaacaggcgtatgtaaacggtgaaaatgctaac
tgcagtcatgaaaatgagccacctcaaaagagagccgccgggggacccaaggtatcggat
aaaccacataataaattggactgcaaaacaggagcaccagggaaaggcagcaaggccgtg
gccaagaaaaagttgattgcaggccagggaaagctgacaaactttttcagattgtaa
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