Acipenser ruthenus (sterlet): 117415858
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Entry
117415858 CDS
T07327
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117415858
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117415858
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
117415858
NCBI-ProteinID:
XP_033882632
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Position
7:complement(19031661..19059760)
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AA seq
1781 aa
AA seq
DB search
MWILQIATILVVWVHVLAQGPQLSYGCAEGSCYPATGDLLIGRADRLSSTSTCGLLKPEP
FCIVSHLQEEKKCFVCDSKERYDENVNHTTSHGIENVVTTFAHNRLKTWWQSENGLENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIESSSDFGRAWQVYRYYAYDCESAFPGISVGPM
KKVNDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPSIQNMLKITNLRINLTRLHT
LGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPIDGTGEDVEGMVHGHCMCRH
HTKGLNCEQCEDFYHDLPWRPAEGRNSNACKKCNCNEHSFTCHFDMAVYMSTGNVSGGVC
DSCEHNTMGHNCEQCKPFFYQHPERDIRDPIICEQCNCDPVGSHNGGICDRYTDFSTGLI
AGQCRCKPNVEGERCDQCKEGFYGLSDDPLGCQPCTCSPLGTLPGGNPCNVETGNCYCKR
LVTGRNCDQCLPQHWGLSNDLDGCRSCDCDHGGALNNNCSAATGQCECREHMFGRQCSEV
ESGFYFIALDHYTYEAEDANFGPGVSIVQRPYPQDRTPTWTGIGFVNVPEGAYLEFYIDN
IPTSMEYDILIRYEPQLPDKWEEAVITVVRPDIISTSSRCVNTVPDDDNQVVSLHPGSRY
VVLPRPVCFEQGLNYTVRLHLPLYSPLNDVQSPYTLIDSIVLMPHCNALEMFTSGSGEDV
ATNSAWETFQRYRCLENSQSVVETPMTDICRNIIFSISALLHQGALSCQCDPQGSLSTVC
NPSGGQCQCRPNVIGRNCDKCAPATYLFGPSGCRSCECNPQGSYNSFCHVETGQCQCIPG
AYGRQCERCLPGYWGFPNCRPCNCNGHTDHCDPQTGECVGCKDQTTGRTCDRCLTGYYGN
PILGSGDHCRPCLCPDGPNSGRQFASSCYQSQDSLQVSCACSEGYAGARCDDCAPGYYGN
PEEVGGVCKPCQCNNNIDMLDSGSCDARTGICLKCLYHTEGGSCERCKLGYYGDALTQTC
RKCVCNYLGTVNDTCPSSNECHCDLNSGQCQCLPNVIGQNCDQCATDTWNLASGNGCEDC
DCDETRSFGSSCNELTGQCVCKPGFGGRACNNCQELFWGDPAEECKACDCEPSGVQTPQC
DRTDGNCICEEGIAGPRCDKCARGYSGVFPDCVQCHRCFAEWDVIIGDLTNKTHKLVKKV
NSIKASGITGPYQDTVNAIEQRADDIRSLLAQNPAAQPLNDIQNLLEEAEKLITEVNKNV
QNIELELAATSANNNNTNTELDDLQKESQNLNKVVKDLAEQLEFVKNSDIQGALDSVNKY
FQQSMDAESRVNTSTTDPDNTVEQSSAIRQQVEDLINETRIQFEENQENYTKHLDDLAAQ
LQTLDLFEVNEKTCGSSGASCTEGQCGGLSCRDEDGTMKCGGEGCDGLVTLSHNAWKKAV
DFDREILNALAEVDQLSKMVSEAKLKADEAKLNAQEVLHKTNSTKQKVDKSNEDLRNLIK
QIREFLTQDGADLESIEAVANEVLKMQMPTTPQQLQELTDDIRERVESLSDVEIILNQSA
DDIHRAETLLGEARKASKEATDVKNTADMVKEALEEAEKAQNAAEKAIKQADVDIRGTQD
LLTSIESETAASESRLNNATQRLAQLEKDIGDLKQKASDNTDTAEEIEKSADKVKHDAEE
AKRELDDELKNKYDDVEVLIVQKSEGVADARQRAEALQNEAKQLLSHAGGRLQELKDLEK
TYEDNQKTLEDKAKLLVELEEAVRSLLQIISQKVAVYSTCL
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactccaaatcgccacgattttagttgtctgggtgcacgtccttgcccaggga
ccccagttaagttacggctgtgctgagggaagttgctacccggccacaggtgacttgttg
atcggaagagcggaccggctttcttccacctccacctgtggtttgttaaaacctgaaccc
ttttgcattgttagccatctgcaggaagagaagaagtgctttgtttgtgattccaaggaa
cggtatgatgagaatgtaaaccacacaaccagccatggcattgagaacgttgtaacaaca
tttgcacataaccgtttaaaaacctggtggcagtctgaaaatggtttggaaaatgttacc
atccagctggatctggaggcagaattccatttcactcatctcattatgacctttaagaca
tttcgtccagctgccatgttgattgagagctcttctgattttgggagggcctggcaggtg
taccgttattatgcatatgactgcgaatctgcattcccaggtatttctgtggggccaatg
aagaaagtcaatgacgtcatctgtgactcccgctattcggacatcgaaccttctacagaa
ggagaggttatctttcgagtcttggatcccgcttttagaattgatgacccttacagcccc
agtatccagaatatgttaaaaatcaccaacctgcggatcaatcttacaagactacacacc
ttgggagataacttgctggactcaaggatggaaatcaaagaaaaatactattatgccatc
tatgacatggtagtccgtggtaattgtttctgttatgggcatgcaagtgaatgtgctcct
atagatggaactggagaagatgttgaaggaatggtacacgggcattgcatgtgcagacac
cacaccaaaggtttgaactgtgagcaatgtgaggatttctaccatgatctaccctggagg
ccagctgaggggcgaaacagcaatgcttgtaaaaaatgtaactgcaatgaacactcattc
acttgtcactttgatatggctgtgtacatgtccacgggaaacgtcagtggaggggtatgt
gacagttgtgagcacaacactatgggacataactgtgaacaatgcaagcctttcttttac
caacatccagagagagatatccgtgaccccatcatctgtgaacaatgtaactgtgaccca
gttggttcccacaatggtggaatctgcgatcgctacactgacttctctactggtctcatt
gctggacaatgtcgctgcaaaccaaatgttgagggcgagcgttgtgatcagtgtaaagaa
gggttctatgggttaagtgatgatcccttggggtgtcagccttgtacatgcagtcctttg
ggaacgcttcctggaggaaatccatgcaatgtagagacaggaaactgttactgcaaacgc
ttggtaactgggaggaactgtgaccagtgtctgccacaacactggggactgagcaacgac
ctggatgggtgcaggtcttgtgactgtgaccatggtggagcgctcaacaacaactgttct
gcagcaaccggacagtgtgagtgtagggagcatatgttcggacgccagtgcagcgaagtt
gaatctgggttttactttattgcactcgatcattatacgtacgaggcagaggatgccaac
tttggcccaggagtgagcatagtccagagaccctatcctcaagatcggacaccaacttgg
acaggaatcgggtttgtgaatgttccagaaggagcctatctagaattctatattgacaac
atccccacttcaatggagtatgatattctaatacgctatgaacctcagttaccagataag
tgggaagaagccgtaataactgttgttcgcccagacatcatttctaccagcagcagatgt
gtgaatacagtgcctgatgatgacaaccaggtggtatctctgcatccaggttccagatat
gtagtcctgccacgccctgtgtgttttgagcagggactgaattatactgtccgcctgcat
ctgccactttactcccctctgaatgatgtccaatccccatacacattgattgattctatt
gtactcatgcctcactgcaatgcattagaaatgtttaccagtggttcaggggaggatgtt
gctacaaacagtgcctgggaaaccttccagagataccgctgcctggaaaacagtcaaagc
gtggtggaaactccaatgactgacatctgcagaaacatcatctttagtatttctgcactg
cttcatcaaggagcgttgtcctgtcagtgtgatcctcaagggtctcttagcacagtgtgc
aaccccagtggagggcagtgtcagtgcaggcctaatgtgattgggagaaactgtgataaa
tgtgctcctgcgacctacttgtttggacccagtggctgtagatcctgtgaatgtaacccc
cagggctcttataactcgttctgccatgttgagactggacagtgccagtgtatccctgga
gcctatggccgtcagtgtgagagatgtctgccgggatactggggatttcccaactgtcgt
ccctgcaattgcaatgggcataccgaccactgcgacccccagactggagagtgtgtgggc
tgtaaggatcaaaccacaggccgcacctgtgataggtgtttaacaggttactatggcaat
ccaattctcgggtcaggtgatcactgccggccttgtctttgtccagatggccccaacagt
ggacgccaatttgctagcagttgttaccagagccaagattctctccaagtttcttgtgca
tgcagcgagggatatgcaggtgccagatgtgatgactgtgctccaggttactatggtaac
ccagaggaagtaggaggagtgtgtaagccgtgccaatgtaacaacaatattgacatgttg
gattcgggttcctgtgatgcacgtacaggaatttgtctgaaatgcctctaccacactgag
ggtggaagctgcgagcgatgcaagcttggctactacggagatgctctgacacaaacctgc
agaaagtgtgtttgtaactacctgggtacagtgaatgatacctgcccctcttcaaatgaa
tgccactgtgacctcaacagtggtcagtgccagtgtctcccgaacgtgattgggcagaat
tgtgatcagtgtgctacagacacttggaatctggccagtgggaatgggtgtgaggattgt
gactgtgatgaaacgcgttcctttggatcatcttgcaatgagttaacaggtcaatgtgtg
tgcaagcctggatttggaggtcgtgcttgcaacaactgccaggagcttttttggggagat
cctgctgaggaatgcaaagcttgtgactgtgaacccagtggcgtccagacaccccagtgt
gaccgcactgatgggaactgtatctgcgaagaaggaatcgcaggtccgcgttgtgataaa
tgtgctagaggctactctggcgttttcccagactgtgtgcaatgtcatcggtgctttgct
gagtgggacgttatcattggagacctaaccaataagacccacaagcttgtgaagaaagtg
aactccatcaaagcaagtggcattactggaccctaccaagacacagtaaacgcaatcgag
caaagggccgatgatatcagaagtcttctagctcagaatcctgccgcccagcctctcaat
gacattcaaaacctcctggaagaggcagagaaactgatcacggaagttaacaaaaatgta
caaaatatagaactggaacttgctgctacgtcagccaataacaacaacacaaacactgag
ctagatgaccttcagaaagaatctcagaatttgaacaaagtggttaaagacttggcagag
cagctggaatttgtcaagaattctgacatccaaggagctttagacagtgtcaacaagtat
tttcagcagtctatggatgctgaatcacgggtaaatacttccactactgacccagataac
acagtagaacaatcctctgccattcgccagcaagtggaagacttaattaatgagactcgg
attcagtttgaggaaaaccaagagaattatactaaacatttagatgatcttgctgctcag
ctacaaaccctagacctgtttgaagtcaatgaaaagacttgtggaagttctggagcctct
tgtactgaaggacagtgtgggggtttaagctgtcgtgatgaagatggaaccatgaaatgt
ggaggcgagggctgtgatggtcttgttactttgtctcacaatgcttggaagaaagctgtg
gactttgacagagaaattctaaatgccttggcagaggtggaccaactgtctaaaatggtt
tctgaggcaaaactgaaagctgatgaggccaagctaaatgcacaggaagttctccacaaa
acaaactcaaccaaacagaaagtggataaaagcaacgaagacctaagaaatttaatcaag
caaatccgcgagttcttgacacaggatggtgcggatctcgaaagcattgaggctgttgct
aacgaagtgttgaaaatgcagatgcctactaccccgcaacagcttcaggaattaactgat
gacattcgggagcgagtggaaagtttgtctgatgtggagataatcttgaaccagagtgct
gacgatattcacagagctgagactctgcttggtgaagccagaaaagcaagtaaagaagca
acagatgtcaagaatacagctgacatggtaaaggaagccctggaggaagctgaaaaagcc
cagaatgctgcagagaaagcaattaaacaggctgatgttgacattagagggactcaggat
ttgttgacctcgattgaatcagagactgcagcttcagagagcagactaaacaatgcaacc
caaagacttgctcagctggagaaggatattggtgatctaaaacagaaggcatctgacaac
acagacacggctgaagagattgagaaatcggcagataaagttaagcatgatgcagaggaa
gctaaaagggaattggatgatgaactgaagaacaaatatgatgatgtagaagttctaata
gtccaaaagtcagaaggtgtggctgatgcaaggcagagggcagaggcacttcaaaatgaa
gcaaaacaattgctatcgcatgctggcggcagactccaggaactaaaagatttagagaaa
acatatgaagataaccagaaaaccttagaagataaagcaaagcttttagttgagcttgag
gaggcagtacgctcacttttgcagattatcagccagaaagttgctgtatatagcacctgc
ttgtaa
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integrated database retrieval system