KEGG   Acipenser ruthenus (sterlet): 117416050
Entry
117416050         CDS       T07327                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:arut03036]
    117416050
   03400 DNA repair and recombination proteins [BR:arut03400]
    117416050
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    117416050
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117416050
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_DAAF5 INTS7_N
Other DBs
NCBI-GeneID: 117416050
NCBI-ProteinID: XP_033882969
LinkDB
Position
7:54855061..54869088
AA seq 1023 aa
MAGNGALLLGLVEQFVTGMQDSKAADTVTGVKKGQFTVLELVEVLGSSLTSSEPRTRGRG
IQLLSQVLQQCCTSLSEKEVQVLTAFYENRLKDHYVITPHVLQGLKALTLCPVLPTGLAV
SILKSLFQDVHVQSLMQTDRSCVYNILINLMESREEELKGLGADFVFGFVQAIDGEKDPR
NLLLAFQIAQNILYRNYELGSFTEELFEVTSCYFPIDFYPPPNDPYGISREELILSLRAV
LAGTPRFAEFLLPLLIEKLDSDVQSSKLDSLQTLAACAAGYGHKELKEFLPSLWSSVRRE
VFQTASEKVESAGLSALRSLTACLSCSVLDSDSEDSLDTFLDLVLKDCQHHLCEPDLKLV
WPSTKLLQTAASASYRASYKITAAVVPLLLEQYNNHTQNAQRRTLVEVLQGFIQLPWGSH
TEEGDENPLTGYRQPLCALVFSALTEPSPTLQTAAVQTLTALGTQPGLLSGEDIDLAADH
LTRLVLREEEPQTCSAAMEAAGSLARLHPTAFASRMVPALKQEIVSEAMEECEGRPTAQS
QQALRQRSLKALSTVSTHPSLVQETVPIILQALCVSHKGSASFELEEVVSACRSLQQITE
LAKDSEESGRYFHQTLIPRLLGLVVQASLQGGGAPNPLIEERVLSAMVPIFSTACGCLHT
QLAAHTTSLVLSLFLDGDASFLPENNFPLQFQLLKERSNGWPQTQLVCLLMACVCSLPKS
VEVPNTDRLLSELEELSCSCVHPFTHTSAAKCFAGLVNKHPAGEQLDSILKRSVKRIESG
LGSDSPNRMQVFTLLLWVSKALLLRYHPLSTILTDKLLSLLVDRELGSLAADGFALLMND
STDVLNRACHADVRMMYRQRFFTETAPKLVLGFNCAPEERKSSYLKALSHILNSLPRQVQ
ITELPSLLPLLLEALSCPDHGVQLSTLSCLHPLLLDTPQVMTSHLETLLSRLLGLTASPA
MKVRITSLQCLKALTRLPEHVVLPSRPRILRALAVPLGDKKRLVRREAVLARGEWFLLGT
PGR
NT seq 3072 nt   +upstreamnt  +downstreamnt
atggctggaaacggagcccttctgctgggtttggtggagcaatttgtaaccggaatgcag
gacagtaaggccgctgatacagtaacaggggtgaagaaaggacagtttaccgtgttagag
ctggtggaagtattggggtcaagtttaacaagctctgagcctcgaactaggggccgtggg
atccagctcctctcccaggtgctgcagcaatgctgtaccagcctatcggagaaagaagtt
caggtcctgacagctttttatgaaaacagactaaaggaccattatgtgataacgcctcat
gtcttgcaagggctcaaggccctgactctgtgcccggtgctgcccactggactggccgtc
tctatcttgaagtctctgtttcaggatgtccatgtacagtctctgatgcagacagaccgg
tcctgtgtttacaacatcctgatcaatttgatggagtctcgcgaggaggagctaaagggc
ctgggtgcagattttgtgttcggttttgtccaagcgatagatggtgagaaggaccccagg
aacctgctgctggccttccagattgcccaaaatattctgtacaggaactatgagctggga
agttttacagaggagctgtttgaagtgacttcttgctatttccccattgatttctatccg
cctccaaacgacccctatggaatcagtcgagaggagctgattctgagcctgagggcagtg
ctggctggcacgcccaggtttgctgagttcctgctgccgctgctgatcgagaagctggat
tcagatgtgcagagctctaagctagactccctgcagacgctggcagcctgtgccgctggc
tacggacacaaagagctgaaagaattcctgccgagtctctggtcatcagttcgcagagag
gtgttccagacagctagtgagaaggtggagagtgccggcctctctgccctgcgctccctc
acagcttgcctgtcttgctccgtcctcgactctgattcagaggactcgctcgacaccttc
ctcgacttggttctcaaagattgccaacaccacctctgtgagccagacctgaagttggtt
tggccgagcaccaaactgctgcagactgccgccagcgcctcctacagggcaagttataaa
ataacagctgcggtggtgccattgctgctggagcagtacaacaaccacacacagaatgct
cagcggcgcaccctggtggaagtgttacaggggttcatccagctcccctgggggagccac
actgaggagggagatgaaaaccctctgactggttaccggcagcccctgtgtgccctggtg
ttctcagctctcacagagccaagccccacactgcagaccgcagccgttcagaccctgact
gccctggggacccagccaggcctgctctctggggaggatattgatcttgctgctgatcac
ctgactcgactggtcctgcgggaggaggagccacagacctgctccgcagcgatggaagct
gctggctctctggctcgtctgcaccccaccgccttcgcctccaggatggtcccggctcta
aaacaagagatcgtctcggaagcaatggaggagtgcgagggccgtcccactgcacaatcc
cagcaggctctgcggcagcgcagtctgaaggctctttcgacagtatcaactcatcccagc
ctcgtccaggagactgtgcctatcatactgcaggccctctgcgtctctcacaaaggaagt
gccagttttgagctggaggaagtggtgtctgcatgtcggagcctacagcaaatcacagag
cttgccaaagacagtgaggagagcggccgctacttccaccagacactcatcccacgcttg
ctggggctggtagtgcaggcctccctacagggtgggggtgccccaaaccccctgatagag
gagagggtgctgtctgctatggttcctatcttcagtactgcttgtggctgccttcacaca
cagctggccgcccacactacgtccctcgttctctccctttttctggatggagatgcctcc
ttcctgcctgagaacaacttcccactgcaattccagctgctgaaggagcgatctaatggc
tggccacagactcagctggtgtgtctcctgatggcgtgtgtctgttcattgcctaagagt
gtggaagttcccaatactgaccgcctcttgagcgaattggaggagctgagctgttcctgt
gtccaccccttcacccacacatcggcagcaaagtgtttcgctggactggtcaacaaacac
ccagcaggggagcagctggactctattttgaagcgatctgtgaagaggattgagtctgga
ttgggcagtgactcgccaaacagaatgcaggttttcactctgctgctttgggtgtccaag
gcactcctcctgaggtatcaccccctgtccacaatacttactgataagctcctgtctctc
ctggtggacagagagctgggttccctggctgctgatggctttgcccttctgatgaacgac
tcgacggatgttttaaatcgagcgtgccatgctgatgtgcgcatgatgtaccggcagaga
ttcttcactgagacggcacccaaattagtcctggggttcaactgcgccccagaagaaagg
aaatccagctacttgaaggccctgtcccacatcctcaacagtttgcccaggcaggtccag
atcaccgagctgccctctctcctgcccctcctcttggaagcactgtcttgtccagaccat
ggtgtccagttgtccaccctgtcctgcctacaccccctcctcctggacaccccgcaggtc
atgacctcacacctggagaccctcctcagccgactcctggggctgaccgccagcccagct
atgaaagttcggatcacatctctgcagtgcttgaaggcactaaccaggctccctgagcat
gtggtgctgccgtcccgcccgcggatcctgcgtgctctggctgtgccgttgggtgataag
aagcggctggtgaggagggaggcagtgcttgcgcgaggggaatggtttttgctgggaacc
ccaggaaggtga

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