Acipenser ruthenus (sterlet): 117416108
Help
Entry
117416108 CDS
T07327
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arut04990
]
117416108
Domain-containing proteins not elsewhere classified [BR:
arut04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117416108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
EGF_3
TB
hEGF
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Lantibiotic_a
Motif
Other DBs
NCBI-GeneID:
117416108
NCBI-ProteinID:
XP_033883059
LinkDB
All DBs
Position
7:40342998..40380480
Genome browser
AA seq
1796 aa
AA seq
DB search
MNRDMDLLRSALLFYIFALFPSPARNQNTAGERIKVLFTPTICKVRCIGGRCTNHCERGN
VTTVYSSERGHSPPGAGFRVFLCPLMCQNGGICMQKDRCLCPPNFTGKFCHIPVSSSTNE
IEGVAQNGAASSNQKGLPQSVYTLPLHSHQSQQSGGSEVVKVHVLHPLEASVNIHQVQRV
REGPAQGQGQGDVSADRRAPVPRIQAQTIRGDSSYSESSGFGYCFQEVRNGQCSSPLPGL
RTQEICCLGQGKAWGINECALCTSNQGSGAGVAGGCPKGFERINGTQCVDVNECSLPRFC
QNGECMNTRGSYSCVCKTGYILDASQGRCISQMVISELKGQCYRILKTGFCTLPILKNIT
KQICCCSRVGKAWGRTCERCPPFGSEEFKEICPAGPGYHYSASSVKINQERQTLVVPPRA
QTPPLTPDVGNEREERQPPRAEKPVLPTQPVRPVQPVQTSTVTTTTRAATRAPEVQVCDL
NPQICGAGRCLKQRGGAYTCLCNQGYHINPQQTRCVDVDECSLSPRPCTNGQCQNTAGSY
RCLCPSGFRLGPQGASCTDTDECRQSPSPCTNARCENTPGSYRCVCAAGYQLDHQGAECT
DINECENALTCPGQECVNSAGSFRCVPCQPGYQLQNSRCTDVDECILSPRPCTNGQCENT
AGSYRCLCPSGFRLGPQGASCTDIDECRLTPRPCSIGQCENTAGSYRCVCPTGYRLNSQR
TQCIDVDECSLSPRPCTNGQCENTAGSYRCLCPSGFRLGPQGASCIDTDECRQSPSPCTN
ARCENTPGSYRCVCAAGYQLDHQGAECTDINECENALTCPGQECVNSAGSFRCVPCQPGY
QLQNSRCTDVDECSLSPRPCTNGQCENTAGSYRCLCPSGFRLGPQGASCTDIDECRLTPR
PCSIGQCENTAGSYRCVCPTGYRLNSLGTQCIDTDECRQSPSPCTNARCENTPGSYRCVC
AAGYQLDHQGAECTDINECENALTCPGQECVNSAGSFRCVPCQPGYQLQNSRCTDVDECR
GLLVCGTNGQCLNTDGSFLCDCKIGFRSDSSGRQCRDINECLEGDFCFPHGECLNTEGSY
SCLCSEGYKATPDGGSCIDVDECARPELCQDGICTNTQGSFECVCQPGFATNPEKTACLD
VDECAESRGAVCGPRRCENTIGSFHCITSCEPGHRATASGDCVDINECANDTVCGDHAFC
QNLIGSYQCLCDQGYEAGRNGRSCVDVNECDSMQGACGAASCENVEGSFLCICGQDSEEF
DPRTGQCISRDGEAQRLPTGEASRPDPYPPHSDVRECYYNIHDANVCQNILTRNTTLQEC
CCTVGEGWGENCQLTACPALGTAEYQAVCPSGKGYVTSTLGSFSYKDVDECTLFSSEVCK
NGVCVNTIPGYSCYCPNGYYYDQTQLECVDNDECLEEESCLGGSCVNTVGSYYCSCESPL
ILDAAQRECVANISQSADENLAYCWQELGEDFICNRLLLDRQITYTECCCLYGLAWGIEC
TLCPAQDSDEYEALCDVLRAPAYGPPAGPYAEEYEPRFRGDYEPPYSTDTFAEPPPRGRT
PDYLRPGGYEDYPSRGGRLPSYGSSSRSPASYRPPEEGPYGSRGPGRSYDLGDFEPELPY
ASEPRPPFGRADSQVDPYYESRRGRYRPLSSQSVGPPSEPDEPSAAWLQYRPRGTAPNPE
YPDRQQGGIRRETYESRYEPYEGLSAEECGILHGCENGRCIRMPEGYTCDCYDGYHLDIS
TMTCRDVNECDEAEDPSTLCVNGQCLNTDGSFQCVCLHGFVMSRQRNYCIPARPRQ
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagacatggacctgcttcgatctgccctactgttttacatctttgctttgttc
ccctccccagctaggaatcaaaacactgcgggcgaacgcattaaggtgctgtttactcca
accatctgcaaggtgcgttgcattgggggtcgctgtaccaaccactgtgagagaggcaat
gtcaccactgtttatagctctgagcgagggcattcaccaccgggagctggcttcagagtc
ttcttatgcccgctgatgtgtcagaacggcggaatttgtatgcagaaggaccgctgtctc
tgccccccgaattttaccgggaaattctgccacatcccggtctcctcctcaaccaatgag
attgagggggtggcccagaatggagcagcatcatccaatcagaagggactgccccagtct
gtgtacaccctcccactgcacagccaccaatcacagcaaagcggaggctcggaggtggtg
aaggtgcatgtgctgcaccccctagaggccagcgtgaatatacaccaggtgcagcgtgtg
agagaggggccagcacaggggcaggggcagggcgatgtcagcgcagacaggagggcaccg
gtgcccaggatccaggctcagaccatccgcggagactccagctactcagagtcatccgga
ttcggatactgtttccaagaagtccggaacggccagtgtagctcccctctgcctggactg
aggacccaggagatctgctgcctaggtcaggggaaagcctgggggatcaacgagtgtgcc
ttgtgcacatccaaccaggggagcggtgctggtgtggcgggaggctgtccaaagggtttt
gagaggatcaatggaacacagtgtgtggatgttaacgagtgctccctgcccaggttctgt
cagaacggggaatgcatgaacacccggggaagttacagctgtgtctgcaagacaggctac
atactggatgcttctcaaggacgctgcatttcccagatggtgatctctgagttgaagggg
cagtgttatcgcatcctgaagacggggttctgcacgctgcccatcctaaagaacatcacc
aagcagatctgctgctgcagccgagtgggcaaagcctggggccggacgtgcgagagatgc
ccgccctttggatcagaggaatttaaggagatttgcccagcagggccaggataccactac
tcagcttccagtgttaaaatcaaccaggagcggcaaaccttagtggtgcctcctagagcc
caaacaccccctctgacccctgatgttggcaacgagagagaggagaggcagccaccgaga
gcagagaaaccagtgctaccaacacaaccagtaagaccagtacaacctgtacagacatcc
accgtcaccaccacaacccgcgctgcaacacgtgccccagaggtgcaagtgtgtgacttg
aacccccagatctgtggagcggggcgctgtctgaagcagcgaggaggagcctacacctgc
ctctgcaaccagggctaccacatcaacccccagcagacacgatgcgtggatgtagacgaa
tgcagcctgagcccgcggccctgcactaatggtcagtgtcagaatacagctgggagttac
cgatgcctgtgtccatctgggtttagactggggccacaaggagccagctgcacagataca
gatgagtgccggcagtcccccagcccctgcactaacgcacgctgtgagaacacacctggc
agctacaggtgtgtttgcgctgctggataccagctggatcaccagggagctgagtgcaca
gatatcaacgagtgtgagaatgctttaacctgccctggtcaggaatgtgttaactccgct
ggctccttccggtgtgtgccctgccagcctggttaccagctacagaacagcagatgcaca
gatgtggacgagtgcatcctgagcccgcggccctgcactaacggtcagtgtgagaataca
gctgggagttaccgatgcctgtgtccatctgggtttagactggggccgcaaggagccagc
tgcacagatatcgacgaatgccgcctgaccccacggccttgctccattggtcaatgtgag
aacacagcgggcagctatagatgtgtgtgtcccaccggctacagactgaactcacagaga
acccagtgcattgatgtggacgagtgcagcctgagcccgcggccctgcactaacggtcag
tgtgagaatacagctgggagttaccgatgcctgtgtccatctgggtttagactggggcca
caaggagccagctgcatagatacagacgagtgccggcagtcccccagcccctgcactaac
gcacgctgtgagaacacacctggcagctacaggtgtgtttgcgctgctggataccagctg
gatcaccagggagctgagtgcacagatatcaacgagtgtgagaatgctttaacctgccct
ggtcaggaatgtgttaactccgctggctccttccggtgtgtgccctgccagcctggttac
cagctacagaacagcagatgcacagatgtggacgagtgcagcctgagcccgcggccctgc
actaacggtcagtgtgagaatacagctgggagttaccgatgcctgtgtccatctgggttt
agactggggccgcaaggagccagctgcacagatatcgacgaatgccgcctgaccccacgg
ccttgctccattggtcaatgcgagaacacagcgggcagctatagatgtgtgtgtcccacc
ggctacagactgaactcactgggaacccagtgcattgatacagacgagtgccggcagtcc
cccagcccctgcactaacgcacgctgtgagaacacacctggcagctacaggtgtgtttgc
gctgctggataccagctggatcaccagggagctgagtgcacagatatcaacgagtgtgag
aatgctttaacctgccctggtcaggaatgtgttaactccgctggctccttccggtgtgtg
ccctgccagcctggttaccagctacagaacagcagatgcacagacgtcgatgagtgtcgg
ggcttgttagtatgcggtactaatgggcagtgcttgaacacagacggctccttcctttgt
gactgcaagatcggattcaggtcggacagtagtgggcgacagtgcagggatattaatgag
tgtcttgaaggggacttctgtttcccgcatggcgaatgtctcaacactgaagggtcatac
agctgtctatgttccgagggatacaaagccaccccagacggaggctcctgtatagatgtg
gatgagtgtgccaggccggagctgtgccaggatggcatttgtaccaacacccagggctcc
ttcgagtgtgtgtgccaacccggctttgccaccaacccagaaaagactgcctgccttgat
gttgatgagtgtgcagagtcgaggggagctgtttgtggaccccgccgttgtgagaatacc
atcggctccttccattgcatcacttcctgtgagcccggccacagggccactgccagcggg
gactgtgtggacatcaacgagtgtgcgaacgacactgtctgcggtgaccatgccttctgc
cagaacctgattggctcataccagtgtctgtgcgaccagggctatgaggcgggacgaaat
gggcggagctgtgtggatgtgaacgagtgtgacagcatgcagggtgcctgcggagcggca
agctgtgagaacgtggagggctccttcctgtgtatctgcggccaggacagtgaggagttt
gaccctcgcactggacagtgcatcagccgggatggggaagcccagaggcttcccactggg
gaagcatctcgaccagacccctacccaccgcacagtgatgtcagagaatgctactacaac
atccatgacgcaaacgtgtgccagaacatactgacacgcaacaccaccctacaggagtgc
tgctgcactgtgggggagggctggggggagaactgtcagctgacagcctgcccggcactt
ggaacagctgaataccaggctgtgtgtcccagcggaaagggatatgtgacctctactctg
ggctccttcagttacaaagatgtagatgagtgcacactgttcagttctgaagtgtgtaag
aatggcgtgtgtgtgaacacgatcccaggatactcctgctactgtcccaatggatactac
tatgaccaaacgcaactggagtgtgtggataacgatgagtgtttggaggaggagtcctgt
ctaggggggagctgtgtcaacactgtgggatcatattactgctcttgcgagtcccctctc
atcctggatgcagcccagcgagagtgtgtcgccaacatcagccaatccgcagatgaaaac
ctggcgtactgctggcaggagttgggggaagattttatctgtaaccggctcttgctggat
aggcagatcacttacacggagtgctgctgcttgtatggactggcctggggtatagaatgt
acactctgccccgcccaagactcagatgagtacgaagccctgtgtgatgtcttgagggcc
ccagcttacggaccccctgctgggccctacgctgaggaatatgaaccacgcttcagaggg
gactatgagcctccatacagtacagacaccttcgctgaaccccctcctagagggagaacc
ccagactatctcagacccggggggtacgaagactacccctcacgtggaggtaggctgcca
agctacgggtcaagttctcgctctccggcttcatacagaccaccagaggagggcccatat
ggaagtcgtggccccggtcggagctacgatctgggggatttcgaacctgagctaccatat
gcatcagagcccagacccccctttggcagagcggactcccaggtagatccctattatgaa
tcccgtcgagggaggtacagacccctgagctcccagtctgtgggacccccctcggagcca
gacgagccctcggccgcctggctgcagtacagacccagagggacagcccccaacccggag
taccctgaccgacaacaggggggcatcaggagagagacctatgagagcagatacgagccg
tacgagggcctgagcgcggaggagtgtgggatactgcacggctgtgagaatggccgctgc
atccgcatgccggagggctatacctgtgactgctatgacggctaccacctggacatatct
acaatgacctgcagagatgtaaacgagtgtgatgaggcagaggacccctccaccctgtgt
gtgaacggacagtgcctgaacacagacggctccttccagtgtgtgtgcctccatggcttt
gtgatgtcaagacaacgtaattactgcatcccagcacgaccacggcagtga
DBGET
integrated database retrieval system
