Acipenser ruthenus (sterlet): 117416252
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Entry
117416252 CDS
T07327
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117416252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117416252
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117416252
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117416252
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
117416252
NCBI-ProteinID:
XP_033883244
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All DBs
Position
7:3408022..3451237
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AA seq
593 aa
AA seq
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MVLQVVGRSEGKGYSPSILGCRIHSHLGSAGRREINAVTNSMFGASRKKFVEGVESDYHD
DSMYYSQSSIFPPHRSEKDMLHSPSPSTSGQLSQLGASLYGPQSCERSIIEKIEEARWDA
LARGEAGALGVQMRGMSNNNPQLNRSLSQGPQLPSHVTPTTGVPTMSLHTPPSPSRGILP
MNPRNMMNHSQVGQGIGMPGRTNSISSSGLGSPNRSSPSIICMPKQQPSRQPFTINSMSG
FGMNRNQSFGMTNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGSGNPTPLLNPLA
GRAPYGEHFFEVGMVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSSNEDSKSNLNSSGK
TASSTDGPKFPGDKGSTVQNNNQQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAA
ETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHI
RDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEP
TMKTNSYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcaggtcgtggggaggtcagagggtaaaggctattcacccagcatcctcggc
tgtagaatacacagccatcttggatctgcggggagaagagaaattaatgcggtgacaaac
agcatgtttggtgcttcaagaaagaagtttgtagagggggtcgaaagcgactaccatgat
gacagcatgtactacagccagtcgtccatcttcccacctcatcggtcagaaaaagacatg
ctgcactctccatcaccatccacgtcaggtcaattgtctcagttaggtgcgagtttatac
gggccgcaaagctgtgagcgctccataatagagaaaatagaagaggcaagatgggatgcc
ctggcgaggggggaggcaggtgcactaggtgtccaaatgcgggggatgagcaacaacaac
cctcagttaaatcgcagcttatcacaaggtccccagctaccgagccatgtaaccccgacg
acaggagtgccgaccatgtctctccatactccaccgtcaccaagcaggggcattttgccc
atgaatcccaggaatatgatgaaccactcccaggtcgggcagggaatcggcatgccagga
cggacaaacagtataagcagttcagggttaggcagtccaaacagaagctcgcccagcata
atatgtatgccaaagcaacaaccctctcggcagccctttaccataaacagtatgtctgga
tttggaatgaacaggaatcagtcgtttgggatgaccaactcgttatcaagcaacattttt
aatgggacagacggaagtgaaaatgtgacggggttggacctctcagactttcctgcacta
gcagacagaagtagaagggaaggaagcggcaatccaactccgttgttaaatccattggca
gggagggctccttatggtgagcatttttttgaagttgggatggtaacaaaaccagcaagt
gaacagtctcaagatttctccatccacaacgaggatttccctgcattgccaggctccagc
tataaagatcctacgtcaagtaacgaagacagtaaatccaacttgaactcttcgggcaag
actgcgtccagtacagatggacctaaattccccggggacaagggttcgactgtgcaaaac
aacaaccagcagaagaaaggcattcaagtgttacctgacggccgggtgactaacattcct
tcagggatggtaacggaccagtttggaatgatcggattgttaacattcatccgggcagcg
gagacggaccctggaatggtacaccttgcattaggaagtgacctgacaacactaggtctc
aatctcaactctccagaaaatctctatcccaaatttgcatcgccatgggcatcagcacct
tgtcgacctcaagatattgacttccatgttccatccgagtatttaacgaacattcacata
agggataagctggctgcaataaaactgtcccgatatggagaagatcttcttttctacttg
tactacatgaatggaggagaccttttacaacttttagcggcggtagagctattcaaccga
gactggaggtaccacaaagaagagagagtttggattaccagggcgccgggaatggagcca
acaatgaagaccaattcctacgagagggggacgtactacttctttgattgtcttaactgg
aggaaggtagctaaggagtttcacctggaatacgacaaactagaagaaaggcctcatgtg
ccatcaaccttcaactataatccagctcagcaagccttctaa
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