KEGG   Acipenser ruthenus (sterlet): 117416598
Entry
117416598         CDS       T07327                                 
Name
(RefSeq) tenascin-N-like
  KO
K06252  tenascin
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04510  Focal adhesion
arut04512  ECM-receptor interaction
arut04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117416598
   04518 Integrin signaling
    117416598
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117416598
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:arut00536]
    117416598
Glycosaminoglycan binding proteins [BR:arut00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   117416598
SSDB
Motif
Pfam: Fibrinogen_C fn3 EGF_TEN EGF_Teneurin Fn3_Dep-1_3rd FN3_DSCAM-DSCAML_C EGF_2 DUF4998 DUF7949 EGF_Tenascin Pur_ac_phosph_N FN3_Tor_3rd
Other DBs
NCBI-GeneID: 117416598
NCBI-ProteinID: XP_033883716
LinkDB
Position
11:complement(34553355..34583767)
AA seq 942 aa
MTVSIRPLLLLGVLCFCSVLITADKPAPDQTGDHEVTFRHIYNIDLPTSSDCKVELDSLP
AKGDGTELVATPVGLNADNNMVFKHNIRLQTPKCDCGASEAFKSMLFKLNRLEEEVTYLK
DQCSQGCCGGGAGLASLCSGHGTFKRDTCGCDCDEGWEGEDCSRRSCPNECNDNGRCVDG
KCVCYEGYTGVDCSEQLCLNDCSDKGRCVDGKCQCFSGFTDEDCSQRTCLNDCSSNGECD
DGVCICEEGFFGDDCSQVLSPKNFRLLKASEESLLVNWDYVPGAEYYLLTYYPEGAEGTI
KQIKVPKTKNSHLITGLTSGVNYIINLYTFIKDISSEPCNLEASTVVSSIDSVKVVSQME
YSIHVEWKNPPTEVDFFKLTTVNPEGQENEVRVQMAKGAKTSYIVRDLQPGTLYLIKVQA
VKEDIEGKPSSVNGVTDIDSPTNLVTTSVTEDTATLTWNRVQAPVDGYRISYTSSDGQSQ
EISVGADRNSHKLTGLRPGVEYTVYIWAMKGNRSSKKTFTKAVTEIDAPTNLVTTSVTED
TATLIWNRVQAPIDGYRISYTSSDGQSQEISVGADRNSHKLTGLRPGVEYTVYIWAMKGN
RSSKKTFTKAVTEIDAPTNLRVTDAKQASGVVTWTPPQAVISGYILSYKRADGKGQETEK
TLSSTDGSYLLGGMEQGVHYIVRLVAFRGAMRSKTVETTFTTVGDLFPFPMDCTQAMKNG
KTSNGIYTIYLNSDRSQPMKVYCDMTTDGGGWIVIQRRNSGKTDFLKRWKNYTQGFGDMN
EEFWLGLDKMYDLTNSQQYELRVDLRAGSESVYAIYDNFKLAPAKQKYQLTVGNYRGTAG
DAMTYHQGRNFTTIDRDNDIALSNCAFTHRGAWWYKNCHLANLNGQYGQTTHSVGVNWEP
WKGHEFSIPFVEMKIRPRIYSENPVLGRKKRSLAGRGKRRTE
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgactgtatcaattagacctctcctcctgctgggggtgctgtgtttctgcagtgttctc
atcactgctgacaaaccagccccagaccaaacaggagaccacgaagtcactttcagacac
atctataacattgacctgcccacgtcctctgactgcaaggtggagttggactctctccca
gccaaaggcgacggtaccgaactggtggccactcctgtgggcctgaatgcagacaacaac
atggtcttcaaacacaacatccggctgcagacacccaagtgtgactgtggtgcctcagag
gccttcaagtctatgctgttcaagctgaaccgcttggaagaggaggtgacctacctgaag
gaccagtgttcccaaggctgctgtggcggtggagcagggttggctagtctgtgtagtggg
cacgggaccttcaagcgggatacatgcggctgtgactgcgatgagggctgggagggtgaa
gactgttccaggcgtagctgtccaaacgagtgcaatgacaatgggcggtgtgtggatggc
aagtgcgtctgctatgagggctacactggtgtggactgcagcgagcagctctgcctcaat
gattgtagtgacaagggccgctgtgtggatggcaagtgccagtgcttctccggcttcaca
gacgaggactgcagccagcgcacctgcctcaacgactgcagcagcaacggggagtgcgat
gacggggtctgcatctgtgaggaagggtttttcggagacgactgctcccaagtgctcagc
ccaaaaaatttccgtttactgaaagcttctgaagaatccctattggtgaactgggactat
gtacctggtgcagagtactatctcctcacctattacccagagggggcagaggggactata
aagcagatcaaagtgcccaagaccaagaactcccacctgatcaccggcctaacttcgggt
gtcaattacatcatcaatttatacacattcataaaagatatctccagtgagccatgcaat
ttggaagccagcacagtggtatcttctattgacagtgtcaaggtggtctctcagatggag
tactccatccatgtcgagtggaagaaccctcccactgaagtagattttttcaaactaact
actgtcaacccagaaggtcaggaaaatgaggtcagggttcaaatggcaaaaggagccaaa
accagctacatcgtcagagatcttcaacctggcactttgtacctgattaaagtgcaggca
gttaaggaagacatagagggaaagccatcttcagttaacggtgtaacagatattgacagc
cccactaacctggtgaccacgagtgtgacagaggacactgccaccctcacctggaacagg
gtgcaggctcccgtcgacgggtacaggatcagctacacctcatctgatgggcagagccag
gagatctctgtgggggcagacaggaactcccacaagctgacaggcctgagacccggagtg
gagtatactgtctacatctgggccatgaagggaaatcgcagcagcaagaagaccttcact
aaagctgtcacagagattgatgcccccactaacctggtgaccacgagtgtgacagaggac
actgccaccctcatctggaacagggtgcaggctcccattgacgggtacaggatcagctac
acctcatctgatgggcagagccaggagatctctgtgggggcagacaggaactcccacaag
ctgacaggcctgagacccggagtggagtatactgtctacatctgggccatgaagggaaat
cgcagcagcaagaagaccttcactaaagctgtcacagaaatcgatgctcctacaaatctg
agggtgactgatgccaaacaggccagtggagtggtaacgtggacccctccacaggctgtt
atcagtggctacattctttcttacaagagggcagatggaaaaggacaggagacggagaag
actcttagctcaactgatggaagttaccttctaggaggtatggagcagggggttcactac
atcgtccgcctagtggccttcagaggagcgatgcgcagcaagacagttgagaccacattt
accacagtcggagatcttttccccttccccatggactgcactcaggcaatgaagaatgga
aagacttcaaatggaatctacaccatctacctcaacagtgacagatcccaaccaatgaag
gtgtactgtgacatgaccactgatggtggtggctggattgttatccagagacgcaacagc
ggcaaaactgatttcttgaaacgctggaagaactacacccaaggctttggggacatgaat
gaggaattctggctgggcctggacaagatgtacgacctgacaaattcacaacagtatgag
ctgcgtgtggatctgagggcaggctcggaatcagtctatgccatctatgacaactttaaa
ttggcaccagcgaaacagaaataccagctgactgtcggaaactacagaggcactgcgggt
gatgcaatgacctaccaccagggcagaaacttcacaacaatagaccgggataatgacatt
gccctcagcaactgtgctttcactcaccgtggagcgtggtggtacaagaattgccacttg
gccaacttgaatggacaatatggacaaaccacccacagtgtgggagtgaactgggagcca
tggaagggacacgagttctccatccccttcgtggaaatgaaaatcagaccccgcatctac
agtgaaaaccctgtgctcgggaggaagaagaggtccctcgctggcaggggaaagaggaga
accgaatga

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