Acipenser ruthenus (sterlet): 117416598
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Entry
117416598 CDS
T07327
Name
(RefSeq) tenascin-N-like
KO
K06252
tenascin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
arut04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117416598
04518 Integrin signaling
117416598
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117416598
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117416598
Glycosaminoglycan binding proteins [BR:
arut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117416598
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
DUF4998
DUF7949
EGF_Tenascin
Pur_ac_phosph_N
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
117416598
NCBI-ProteinID:
XP_033883716
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All DBs
Position
11:complement(34553355..34583767)
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AA seq
942 aa
AA seq
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MTVSIRPLLLLGVLCFCSVLITADKPAPDQTGDHEVTFRHIYNIDLPTSSDCKVELDSLP
AKGDGTELVATPVGLNADNNMVFKHNIRLQTPKCDCGASEAFKSMLFKLNRLEEEVTYLK
DQCSQGCCGGGAGLASLCSGHGTFKRDTCGCDCDEGWEGEDCSRRSCPNECNDNGRCVDG
KCVCYEGYTGVDCSEQLCLNDCSDKGRCVDGKCQCFSGFTDEDCSQRTCLNDCSSNGECD
DGVCICEEGFFGDDCSQVLSPKNFRLLKASEESLLVNWDYVPGAEYYLLTYYPEGAEGTI
KQIKVPKTKNSHLITGLTSGVNYIINLYTFIKDISSEPCNLEASTVVSSIDSVKVVSQME
YSIHVEWKNPPTEVDFFKLTTVNPEGQENEVRVQMAKGAKTSYIVRDLQPGTLYLIKVQA
VKEDIEGKPSSVNGVTDIDSPTNLVTTSVTEDTATLTWNRVQAPVDGYRISYTSSDGQSQ
EISVGADRNSHKLTGLRPGVEYTVYIWAMKGNRSSKKTFTKAVTEIDAPTNLVTTSVTED
TATLIWNRVQAPIDGYRISYTSSDGQSQEISVGADRNSHKLTGLRPGVEYTVYIWAMKGN
RSSKKTFTKAVTEIDAPTNLRVTDAKQASGVVTWTPPQAVISGYILSYKRADGKGQETEK
TLSSTDGSYLLGGMEQGVHYIVRLVAFRGAMRSKTVETTFTTVGDLFPFPMDCTQAMKNG
KTSNGIYTIYLNSDRSQPMKVYCDMTTDGGGWIVIQRRNSGKTDFLKRWKNYTQGFGDMN
EEFWLGLDKMYDLTNSQQYELRVDLRAGSESVYAIYDNFKLAPAKQKYQLTVGNYRGTAG
DAMTYHQGRNFTTIDRDNDIALSNCAFTHRGAWWYKNCHLANLNGQYGQTTHSVGVNWEP
WKGHEFSIPFVEMKIRPRIYSENPVLGRKKRSLAGRGKRRTE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgactgtatcaattagacctctcctcctgctgggggtgctgtgtttctgcagtgttctc
atcactgctgacaaaccagccccagaccaaacaggagaccacgaagtcactttcagacac
atctataacattgacctgcccacgtcctctgactgcaaggtggagttggactctctccca
gccaaaggcgacggtaccgaactggtggccactcctgtgggcctgaatgcagacaacaac
atggtcttcaaacacaacatccggctgcagacacccaagtgtgactgtggtgcctcagag
gccttcaagtctatgctgttcaagctgaaccgcttggaagaggaggtgacctacctgaag
gaccagtgttcccaaggctgctgtggcggtggagcagggttggctagtctgtgtagtggg
cacgggaccttcaagcgggatacatgcggctgtgactgcgatgagggctgggagggtgaa
gactgttccaggcgtagctgtccaaacgagtgcaatgacaatgggcggtgtgtggatggc
aagtgcgtctgctatgagggctacactggtgtggactgcagcgagcagctctgcctcaat
gattgtagtgacaagggccgctgtgtggatggcaagtgccagtgcttctccggcttcaca
gacgaggactgcagccagcgcacctgcctcaacgactgcagcagcaacggggagtgcgat
gacggggtctgcatctgtgaggaagggtttttcggagacgactgctcccaagtgctcagc
ccaaaaaatttccgtttactgaaagcttctgaagaatccctattggtgaactgggactat
gtacctggtgcagagtactatctcctcacctattacccagagggggcagaggggactata
aagcagatcaaagtgcccaagaccaagaactcccacctgatcaccggcctaacttcgggt
gtcaattacatcatcaatttatacacattcataaaagatatctccagtgagccatgcaat
ttggaagccagcacagtggtatcttctattgacagtgtcaaggtggtctctcagatggag
tactccatccatgtcgagtggaagaaccctcccactgaagtagattttttcaaactaact
actgtcaacccagaaggtcaggaaaatgaggtcagggttcaaatggcaaaaggagccaaa
accagctacatcgtcagagatcttcaacctggcactttgtacctgattaaagtgcaggca
gttaaggaagacatagagggaaagccatcttcagttaacggtgtaacagatattgacagc
cccactaacctggtgaccacgagtgtgacagaggacactgccaccctcacctggaacagg
gtgcaggctcccgtcgacgggtacaggatcagctacacctcatctgatgggcagagccag
gagatctctgtgggggcagacaggaactcccacaagctgacaggcctgagacccggagtg
gagtatactgtctacatctgggccatgaagggaaatcgcagcagcaagaagaccttcact
aaagctgtcacagagattgatgcccccactaacctggtgaccacgagtgtgacagaggac
actgccaccctcatctggaacagggtgcaggctcccattgacgggtacaggatcagctac
acctcatctgatgggcagagccaggagatctctgtgggggcagacaggaactcccacaag
ctgacaggcctgagacccggagtggagtatactgtctacatctgggccatgaagggaaat
cgcagcagcaagaagaccttcactaaagctgtcacagaaatcgatgctcctacaaatctg
agggtgactgatgccaaacaggccagtggagtggtaacgtggacccctccacaggctgtt
atcagtggctacattctttcttacaagagggcagatggaaaaggacaggagacggagaag
actcttagctcaactgatggaagttaccttctaggaggtatggagcagggggttcactac
atcgtccgcctagtggccttcagaggagcgatgcgcagcaagacagttgagaccacattt
accacagtcggagatcttttccccttccccatggactgcactcaggcaatgaagaatgga
aagacttcaaatggaatctacaccatctacctcaacagtgacagatcccaaccaatgaag
gtgtactgtgacatgaccactgatggtggtggctggattgttatccagagacgcaacagc
ggcaaaactgatttcttgaaacgctggaagaactacacccaaggctttggggacatgaat
gaggaattctggctgggcctggacaagatgtacgacctgacaaattcacaacagtatgag
ctgcgtgtggatctgagggcaggctcggaatcagtctatgccatctatgacaactttaaa
ttggcaccagcgaaacagaaataccagctgactgtcggaaactacagaggcactgcgggt
gatgcaatgacctaccaccagggcagaaacttcacaacaatagaccgggataatgacatt
gccctcagcaactgtgctttcactcaccgtggagcgtggtggtacaagaattgccacttg
gccaacttgaatggacaatatggacaaaccacccacagtgtgggagtgaactgggagcca
tggaagggacacgagttctccatccccttcgtggaaatgaaaatcagaccccgcatctac
agtgaaaaccctgtgctcgggaggaagaagaggtccctcgctggcaggggaaagaggaga
accgaatga
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