KEGG   Acipenser ruthenus (sterlet): 117416909
Entry
117416909         CDS       T07327                                 
Name
(RefSeq) nucleoporin NDC1-like isoform X1
  KO
K14315  nucleoporin NDC1
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117416909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117416909
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     117416909
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 117416909
NCBI-ProteinID: XP_033884279
LinkDB
Position
11:complement(35899955..35909177)
AA seq 670 aa
MLSLGHDHWFIRKVVFWRAAASIAWSVLLLPASTAIFVLLSRFSVLHPIEWITGSLNFLC
GSYVIFSIILLCLVVLIIGFFILEFYTVVPSIPCTQIALIGKVLHPQQFIHSLVHAVMGM
LVSWCAAVMIGGRYQFLTTPCIAEESAVASSMCLNEYHLFFLLAGAFMGYSYSLLYVVGN
MNYVSFPSIQQYKYLRFKGSLPLVIKHSAVQALYSVRNYCITYFFLGYIPRAWICTTMNL
QKDRALHSLDTLTGLLDFSLLYHLWISGTFLLVTWYMAWLLFRIYTTEVYCFPVQSSFSE
DAHQCLSKVLSSKQPLILKYLALQDFALLSQNSPSRRQEVFSLSQPGGHPHNWSALSGEC
LTILNDLTQKLIAYQEAVSSNGRIKPQPVGSDKRPSSSGSSATSLIEEPTSWQTPKVSMG
PKTPGSVFLRSSVASPFTPDLGSPFGSPAMKRLTGTLDPSSPWHGSVQSPHVMRRGPKLW
TSSLGAESPLNGSPQSGPVPVPSPVAGAQKPSIVSLWIQNRQEQVKNVLAKRVLIMYLFN
KLPEASSQALFAESQAHIWALEGLSHLVAASYTEDRFGVVQTTLPDILGTMLTLQEAVDK
HFKLPHASSKPARTLSSLVDTSYKTLRFALRASLKTAIYRITTTFGEHLNAVQVSVEHRK
KLQQFLEYKE
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgttatcgcttggacatgaccattggttcattagaaaggtggtattttggcgggcagca
gcaagtattgcatggtcagtgttgttgttaccagcttccactgcaatatttgtacttctg
agcaggttcagtgtcttgcatcccatagaatggataaccggttcactaaactttttgtgt
ggttcctatgttattttttctattatacttctgtgcttggtggtgctgattattggtttc
ttcattctggagttttacacagtggtgccttcaataccttgtactcagattgcactaata
ggaaaggtgcttcacccccagcagttcattcactctctggttcacgctgtgatgggaatg
ctggtatcctggtgtgcagcagtgatgataggcggacgataccagtttcttaccacccct
tgcattgccgaggaaagtgctgttgctagttctatgtgcctcaatgagtaccacctcttc
tttctgttggctggcgctttcatgggttacagctacagtcttctatatgttgttggcaac
atgaactatgtatcttttccaagtatacagcaatataagtacctgcgtttcaagggatcc
ctgcctctggtaattaagcacagtgcagttcaggcgttgtattctgttcggaactactgc
atcacttatttcttcttgggttatatccccagagcatggatatgtacaacaatgaatctt
caaaaagacagggctcttcactccctggacaccctcacaggcctacttgacttttctctt
ctctaccacttgtggataagtggaacatttctcttagtaacatggtacatggcatggctg
ttgtttagaatctacacaacagaggtgtattgttttccagtgcaatcctcattttcagag
gatgcacaccagtgcctttccaaagtcttaagcagcaagcaacccctcattttaaagtat
ttagctttacaggattttgcattgctgtctcaaaactctccatccagaagacaagaagtt
tttagcttgagtcaacccggtggccatcctcacaactggtcagcattatcaggggaatgt
ttaactatattgaatgaccttacccagaagctgattgcttaccaagaagctgtttcatcc
aatgggagaattaagccacagcctgttggcagtgataagagaccttcgtcttctggcagt
tcggcaacatctttaatagaggaacctacgagctggcaaactccaaaagttagcatgggt
cccaaaacccctggttctgtgtttctcaggtcctctgtggcatccccattcactcccgat
ctaggaagcccttttggttcccctgcaatgaaacgattgactggaacactggacccatct
tctccttggcatggctcagtgcaaagtcctcatgttatgagaagaggacccaaactctgg
acctcgtctttgggtgcagagtctcccttgaatggcagcccacaatcaggacctgttcca
gtgccaagcccagttgctggggcacagaagcccagcatagtctctctgtggattcagaac
cgtcaggaacaggttaaaaatgtcctggctaaacgggtgctgataatgtatttatttaat
aagcttccagaagcctccagccaagcactttttgctgagagtcaggcacacatttgggca
cttgaaggtctgtcccatttggtagcagcgtcctatacagaagacagatttggggttgtt
cagactacacttcctgatattcttggtactatgcttactttgcaggaggcagtagataag
catttcaagttacctcatgcctccagtaaaccagcaagaactttgagtagcctggttgat
acttcctacaaaaccctaaggtttgctctgagggcttctctgaaaactgccatctacagg
ataactaccacctttggagaacatttaaatgctgttcaagtgtcggtggagcatcgaaaa
aaactccagcagtttttggaatataaagaatga

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