Acipenser ruthenus (sterlet): 117416909
Help
Entry
117416909 CDS
T07327
Name
(RefSeq) nucleoporin NDC1-like isoform X1
KO
K14315
nucleoporin NDC1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117416909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117416909
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117416909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
117416909
NCBI-ProteinID:
XP_033884279
LinkDB
All DBs
Position
11:complement(35899955..35909177)
Genome browser
AA seq
670 aa
AA seq
DB search
MLSLGHDHWFIRKVVFWRAAASIAWSVLLLPASTAIFVLLSRFSVLHPIEWITGSLNFLC
GSYVIFSIILLCLVVLIIGFFILEFYTVVPSIPCTQIALIGKVLHPQQFIHSLVHAVMGM
LVSWCAAVMIGGRYQFLTTPCIAEESAVASSMCLNEYHLFFLLAGAFMGYSYSLLYVVGN
MNYVSFPSIQQYKYLRFKGSLPLVIKHSAVQALYSVRNYCITYFFLGYIPRAWICTTMNL
QKDRALHSLDTLTGLLDFSLLYHLWISGTFLLVTWYMAWLLFRIYTTEVYCFPVQSSFSE
DAHQCLSKVLSSKQPLILKYLALQDFALLSQNSPSRRQEVFSLSQPGGHPHNWSALSGEC
LTILNDLTQKLIAYQEAVSSNGRIKPQPVGSDKRPSSSGSSATSLIEEPTSWQTPKVSMG
PKTPGSVFLRSSVASPFTPDLGSPFGSPAMKRLTGTLDPSSPWHGSVQSPHVMRRGPKLW
TSSLGAESPLNGSPQSGPVPVPSPVAGAQKPSIVSLWIQNRQEQVKNVLAKRVLIMYLFN
KLPEASSQALFAESQAHIWALEGLSHLVAASYTEDRFGVVQTTLPDILGTMLTLQEAVDK
HFKLPHASSKPARTLSSLVDTSYKTLRFALRASLKTAIYRITTTFGEHLNAVQVSVEHRK
KLQQFLEYKE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgcttggacatgaccattggttcattagaaaggtggtattttggcgggcagca
gcaagtattgcatggtcagtgttgttgttaccagcttccactgcaatatttgtacttctg
agcaggttcagtgtcttgcatcccatagaatggataaccggttcactaaactttttgtgt
ggttcctatgttattttttctattatacttctgtgcttggtggtgctgattattggtttc
ttcattctggagttttacacagtggtgccttcaataccttgtactcagattgcactaata
ggaaaggtgcttcacccccagcagttcattcactctctggttcacgctgtgatgggaatg
ctggtatcctggtgtgcagcagtgatgataggcggacgataccagtttcttaccacccct
tgcattgccgaggaaagtgctgttgctagttctatgtgcctcaatgagtaccacctcttc
tttctgttggctggcgctttcatgggttacagctacagtcttctatatgttgttggcaac
atgaactatgtatcttttccaagtatacagcaatataagtacctgcgtttcaagggatcc
ctgcctctggtaattaagcacagtgcagttcaggcgttgtattctgttcggaactactgc
atcacttatttcttcttgggttatatccccagagcatggatatgtacaacaatgaatctt
caaaaagacagggctcttcactccctggacaccctcacaggcctacttgacttttctctt
ctctaccacttgtggataagtggaacatttctcttagtaacatggtacatggcatggctg
ttgtttagaatctacacaacagaggtgtattgttttccagtgcaatcctcattttcagag
gatgcacaccagtgcctttccaaagtcttaagcagcaagcaacccctcattttaaagtat
ttagctttacaggattttgcattgctgtctcaaaactctccatccagaagacaagaagtt
tttagcttgagtcaacccggtggccatcctcacaactggtcagcattatcaggggaatgt
ttaactatattgaatgaccttacccagaagctgattgcttaccaagaagctgtttcatcc
aatgggagaattaagccacagcctgttggcagtgataagagaccttcgtcttctggcagt
tcggcaacatctttaatagaggaacctacgagctggcaaactccaaaagttagcatgggt
cccaaaacccctggttctgtgtttctcaggtcctctgtggcatccccattcactcccgat
ctaggaagcccttttggttcccctgcaatgaaacgattgactggaacactggacccatct
tctccttggcatggctcagtgcaaagtcctcatgttatgagaagaggacccaaactctgg
acctcgtctttgggtgcagagtctcccttgaatggcagcccacaatcaggacctgttcca
gtgccaagcccagttgctggggcacagaagcccagcatagtctctctgtggattcagaac
cgtcaggaacaggttaaaaatgtcctggctaaacgggtgctgataatgtatttatttaat
aagcttccagaagcctccagccaagcactttttgctgagagtcaggcacacatttgggca
cttgaaggtctgtcccatttggtagcagcgtcctatacagaagacagatttggggttgtt
cagactacacttcctgatattcttggtactatgcttactttgcaggaggcagtagataag
catttcaagttacctcatgcctccagtaaaccagcaagaactttgagtagcctggttgat
acttcctacaaaaccctaaggtttgctctgagggcttctctgaaaactgccatctacagg
ataactaccacctttggagaacatttaaatgctgttcaagtgtcggtggagcatcgaaaa
aaactccagcagtttttggaatataaagaatga
DBGET
integrated database retrieval system