Acipenser ruthenus (sterlet): 117416939
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Entry
117416939 CDS
T07327
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117416939
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117416939
Spliceosome [BR:
arut03041
]
Complex C
Other components
Complex C specific factors
117416939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
AAA_19
nSTAND3
AAA_7
AAA_30
Motif
Other DBs
NCBI-GeneID:
117416939
NCBI-ProteinID:
XP_034761709
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Position
24:complement(22780584..22793150)
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AA seq
699 aa
AA seq
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MAAPWSSMKFWKPGTEGPGLSLNEEREATAEVGGSIVYNPHASLSIEKQRQKLPVFKHRN
YILYLLENYQTVVIVGETGCGKSTQIPQYLLEAGWAAEGKVVGVTQPRRVAAVSVAGRVA
EERGALLGHEVGYTIRFDDCSDVHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHER
TLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEQFRDFFNLNESGNPSKDTCGILTVEGR
TFPVDVFYTMSPVPDYVKATVETVMKIHESEGDGDVLAFLTGQEEVERVVSMLVEQSRAL
SRSGMKKHLRALPMYAGLPYSEQMKVFERVPHTVRKVVVATNIAETSITINGVVFVIDCG
FVKLRAYNPKTAIESLVVAPVSQASASQRAGRGGRNRAGKCYRLYTEEDFEKLPPSTVPE
MQRTNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLLALGGLDEHGRLTEPLGM
RMAEFPLIPMFAKMLLESGSFGCSEEIVTIAAMMQIQNVFVSPPSQKKPAARKHRKFAVA
EGDHLTMLNVYEAFVKNRRSSQWCQEHFLNYKGLQRAAAVREQLWRLLSKFRVPKKSSEG
DPEVILRCIVSGFFANAARLHHSGAYRTLRDDHELHIHPTSVLYAEKPPKWVVYNEVMQT
SRYFLRDVSAIESSWLVELAPHFYRRGMHSSGSKRTKVV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccctggtcctcaatgaagttctggaaacctggaacggagggtccaggtctc
agtctcaatgaggagcgcgaggcgactgcagaggtcggcggctctatagtctacaaccct
catgcctcgctgtccatcgagaaacagaggcagaaacttcccgtgttcaagcacagaaac
tacatattgtacctgctggagaactatcaaactgtggtgatcgttggagaaacaggatgt
gggaaaagcactcagattcctcagtatctcctggaggctggatgggctgcagaagggaaa
gtggtgggagtgacccagccacgaagggtggctgcagtctcggtggctggtcgtgtggct
gaggagagaggggcattgctgggccatgaggttggatacacaatacggtttgatgattgt
tccgatgtccatgccacacgcatcaagttcctgaccgatggaatgctggtgagagaaatg
atggcggatcctttattaaagaagtacagtgtcctgatgcttgacgaggctcatgaacga
accctctacacagacatcgctatcggacttctcaagaagattcagaagaagcgcggagat
ctgcgactgattgtggcgtcagctactctagatgctgagcaatttcgggatttctttaac
ctgaatgagtctggaaaccccagtaaggatacctgtggcattctaacagtagaggggagg
acattccctgtggatgtcttttatacaatgagcccggttcctgactatgtgaaggccaca
gtggagacggtgatgaagatccacgagtctgaaggcgatggggacgtcctggcattcctc
accgggcaggaggaggtggagagagtggtgtccatgctggtagagcagtcccgggccctg
tcccgctcggggatgaagaagcacctacgagctcttcccatgtatgcaggcctgccctac
tctgagcagatgaaggttttcgagagggtgccccacactgtgcgcaaggtggttgttgcg
accaacattgcagagacctccatcactataaacggcgtggtgtttgtcattgactgcggg
tttgtgaagctgagggcctacaaccccaaaacagccatcgagtccctggtagtggctcct
gtctcccaggcgtcggccagtcagagagcaggaagaggcggcaggaaccgggccgggaag
tgttatcggctctatacagaagaagactttgaaaagttacccccatctacagtccctgag
atgcagcgcactaacttggcccctgtgatcctgcagctgaaagccctggggatagacaac
gttctgaggttcagcttcctgtctcctccccctgcccagtccatggtacaggctctggaa
ctgctccttgcactcggagggttagatgagcacggacgactgactgagccgctgggaatg
cggatggctgaattccccctcattcccatgtttgcgaagatgttactggaatcggggagt
ttcggctgctctgaagagattgtgaccatcgcagccatgatgcagatccagaacgtgttc
gtctctccacccagccagaagaagccagctgccaggaagcacaggaagtttgccgtggca
gaaggggaccatctgaccatgctgaatgtttatgaggcctttgttaagaatcgcaggagc
tcgcagtggtgccaggagcacttcctcaattacaaagggctgcagagagccgcagctgtg
agggagcagctatggagactgctgagcaagtttagagtacccaagaagtccagcgaaggt
gacccggaggttattctgcgctgcatcgtctcggggttctttgccaacgcggccaggctt
caccattcaggggcgtacaggacgcttcgagatgaccatgagctgcatattcatcccacc
tctgtgctctacgcggagaagcctcctaaatgggtagtgtacaatgaggtgatgcagaca
tccaggtacttcctgcgggacgtgtctgcaatagagtcctcttggctggtggaactggcc
cctcatttttaccggaggggaatgcattcatcgggttcaaagagaacaaaagtagtttga
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