KEGG   Acipenser ruthenus (sterlet): 117416939
Entry
117416939         CDS       T07327                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arut03041]
    117416939
Enzymes [BR:arut01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     117416939
Spliceosome [BR:arut03041]
 Complex C
  Other components
   Complex C specific factors
    117416939
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N DEAD AAA_22 ABC_tran Cas3-like_C_2 AAA_19 nSTAND3 AAA_7 AAA_30
Other DBs
NCBI-GeneID: 117416939
NCBI-ProteinID: XP_034761709
LinkDB
Position
24:complement(22780584..22793150)
AA seq 699 aa
MAAPWSSMKFWKPGTEGPGLSLNEEREATAEVGGSIVYNPHASLSIEKQRQKLPVFKHRN
YILYLLENYQTVVIVGETGCGKSTQIPQYLLEAGWAAEGKVVGVTQPRRVAAVSVAGRVA
EERGALLGHEVGYTIRFDDCSDVHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHER
TLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEQFRDFFNLNESGNPSKDTCGILTVEGR
TFPVDVFYTMSPVPDYVKATVETVMKIHESEGDGDVLAFLTGQEEVERVVSMLVEQSRAL
SRSGMKKHLRALPMYAGLPYSEQMKVFERVPHTVRKVVVATNIAETSITINGVVFVIDCG
FVKLRAYNPKTAIESLVVAPVSQASASQRAGRGGRNRAGKCYRLYTEEDFEKLPPSTVPE
MQRTNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLLALGGLDEHGRLTEPLGM
RMAEFPLIPMFAKMLLESGSFGCSEEIVTIAAMMQIQNVFVSPPSQKKPAARKHRKFAVA
EGDHLTMLNVYEAFVKNRRSSQWCQEHFLNYKGLQRAAAVREQLWRLLSKFRVPKKSSEG
DPEVILRCIVSGFFANAARLHHSGAYRTLRDDHELHIHPTSVLYAEKPPKWVVYNEVMQT
SRYFLRDVSAIESSWLVELAPHFYRRGMHSSGSKRTKVV
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggcggcgccctggtcctcaatgaagttctggaaacctggaacggagggtccaggtctc
agtctcaatgaggagcgcgaggcgactgcagaggtcggcggctctatagtctacaaccct
catgcctcgctgtccatcgagaaacagaggcagaaacttcccgtgttcaagcacagaaac
tacatattgtacctgctggagaactatcaaactgtggtgatcgttggagaaacaggatgt
gggaaaagcactcagattcctcagtatctcctggaggctggatgggctgcagaagggaaa
gtggtgggagtgacccagccacgaagggtggctgcagtctcggtggctggtcgtgtggct
gaggagagaggggcattgctgggccatgaggttggatacacaatacggtttgatgattgt
tccgatgtccatgccacacgcatcaagttcctgaccgatggaatgctggtgagagaaatg
atggcggatcctttattaaagaagtacagtgtcctgatgcttgacgaggctcatgaacga
accctctacacagacatcgctatcggacttctcaagaagattcagaagaagcgcggagat
ctgcgactgattgtggcgtcagctactctagatgctgagcaatttcgggatttctttaac
ctgaatgagtctggaaaccccagtaaggatacctgtggcattctaacagtagaggggagg
acattccctgtggatgtcttttatacaatgagcccggttcctgactatgtgaaggccaca
gtggagacggtgatgaagatccacgagtctgaaggcgatggggacgtcctggcattcctc
accgggcaggaggaggtggagagagtggtgtccatgctggtagagcagtcccgggccctg
tcccgctcggggatgaagaagcacctacgagctcttcccatgtatgcaggcctgccctac
tctgagcagatgaaggttttcgagagggtgccccacactgtgcgcaaggtggttgttgcg
accaacattgcagagacctccatcactataaacggcgtggtgtttgtcattgactgcggg
tttgtgaagctgagggcctacaaccccaaaacagccatcgagtccctggtagtggctcct
gtctcccaggcgtcggccagtcagagagcaggaagaggcggcaggaaccgggccgggaag
tgttatcggctctatacagaagaagactttgaaaagttacccccatctacagtccctgag
atgcagcgcactaacttggcccctgtgatcctgcagctgaaagccctggggatagacaac
gttctgaggttcagcttcctgtctcctccccctgcccagtccatggtacaggctctggaa
ctgctccttgcactcggagggttagatgagcacggacgactgactgagccgctgggaatg
cggatggctgaattccccctcattcccatgtttgcgaagatgttactggaatcggggagt
ttcggctgctctgaagagattgtgaccatcgcagccatgatgcagatccagaacgtgttc
gtctctccacccagccagaagaagccagctgccaggaagcacaggaagtttgccgtggca
gaaggggaccatctgaccatgctgaatgtttatgaggcctttgttaagaatcgcaggagc
tcgcagtggtgccaggagcacttcctcaattacaaagggctgcagagagccgcagctgtg
agggagcagctatggagactgctgagcaagtttagagtacccaagaagtccagcgaaggt
gacccggaggttattctgcgctgcatcgtctcggggttctttgccaacgcggccaggctt
caccattcaggggcgtacaggacgcttcgagatgaccatgagctgcatattcatcccacc
tctgtgctctacgcggagaagcctcctaaatgggtagtgtacaatgaggtgatgcagaca
tccaggtacttcctgcgggacgtgtctgcaatagagtcctcttggctggtggaactggcc
cctcatttttaccggaggggaatgcattcatcgggttcaaagagaacaaaagtagtttga

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