Acipenser ruthenus (sterlet): 117416954
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Entry
117416954 CDS
T07327
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117416954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117416954
04090 CD molecules [BR:
arut04090
]
117416954
04091 Lectins [BR:
arut04091
]
117416954
Cell adhesion molecules [BR:
arut04515
]
Immunoglobulin superfamily
VCAM
117416954
CD molecules [BR:
arut04090
]
Proteins
117416954
Lectins [BR:
arut04091
]
I-type lectins (Siglecs)
117416954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_4
C1-set
ICAM_N
Ig_5
DUF2808
Receptor_2B4
ICAM1_3_5_D2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
117416954
NCBI-ProteinID:
XP_033884359
LinkDB
All DBs
Position
11:complement(26972326..26979416)
Genome browser
AA seq
821 aa
AA seq
DB search
MGFNSQFIGVLLFLFLNRVLSFKAEIEPPQRRITVENGSDLVLICRAKDCLSPTFSWIAV
EDKPMYMKVENDVLESRAVLTPVSRDNDNTYICKVSCGSQRAQKSIEIKVYSFPSDPVIS
HAPLQEGKEVALTCKVPDVYPQEYLVIQWLDGERVLKESDNQESSSLSLTYKFVPKIEET
GKKLTCKAIITMEGIPEAQKTKTTTTTFDVHYAPQKPLVSGSSSSTVREGEEMSLTCSAQ
SNPPAELVWKKLLPQGQSQVVAEGGTLFIGKAQPFDSGEYQCEALNALGSSSTNIEITVQ
VAPKNTSISVYPAEALKEGGSMTVSCASHSNPAATITLRKKSPTGDRELESSNGSLTINE
AQLDDSGLYECEATNEVGSEKATVNISVEAIPFEVEMDPPQRELTVESGSDLVLTCRVAD
CPSPQFTWKHPTDRPQYDKTDTEGNESRISLSSVGTNQENIYRCQVKCGSVIKESSTQIK
VYSFPSDPVIESHAPLQEGKEAALTCKVAGVYPPEYLEIQWLDGERVLKRDEGIYIKNND
VSNLTSTYTFVPKMEDSGKEVTCKAIFKMEGIPDQKKSKASAVSLNIHVSPKNTSISVYP
AEALKEGDSMTVSCASHSNPAATITLRKKSPTGDRELESSNGSLTINEAQLGDSGLYECE
ATNEFGSEKASVEISVKVPPRNTTVLVYPSTEVLEGQNITISCKTVSYPAPTIVLKKIGN
GTTFCSDNGTFELYYLTTKDTGLYELNVTNDVGHEVEVIEIHVGKRLEGKKPPPYLAILI
PIIGASAAALAAASALFVIRLLRQAQSRGSYALTQLNPAAV
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggattcaattcacaattcatcggggtcttgctgttcctctttttaaatagagtactt
tcatttaaagctgaaattgagccacctcaacgtaggattactgtagagaatggaagcgac
ctggttcttatatgccgtgccaaagactgtctttccccgacattcagctggatagcggtg
gaagataaaccgatgtacatgaaagtcgagaacgacgttttagagtcgcgtgctgtcctc
acacctgtgagcagagacaacgataacacttacatctgtaaggtgtcgtgtggatcacag
agagcacagaagtctattgaaataaaagtgtactctttccccagcgaccctgtcatttcc
catgccccccttcaggaagggaaagaagtcgctctcacctgcaaagtccccgatgtgtat
cctcaggagtacctggtgattcagtggctggacggggaacgtgttctcaaagaatcagac
aaccaggaaagcagctctttatctttaacttacaagtttgtacccaaaattgaagaaact
gggaaaaaactaacctgcaaagccataatcacaatggaagggataccagaagcccagaaa
accaaaactaccactacaacgtttgatgtacactacgccccacagaagcctttagtttct
gggagctcaagcagcactgtaagggaaggcgaggagatgagcctaacctgttctgctcag
agcaatcctcctgcagagctggtgtggaagaagctgcttcctcaaggtcaatctcaagtg
gtagctgagggtgggacgctgttcattgggaaggctcagccttttgactctggagagtat
caatgtgaagccctcaatgctttagggagcagctcgacaaacatagaaatcacggttcaa
gttgcacccaagaatacctccatttccgtgtacccggctgaagcactgaaagaaggaggc
agcatgactgtttcttgtgcctcccacagtaacccagcagcgaccatcactctgcgcaag
aagagccccactggagacagagagctggagtccagcaatggctcattgacaattaatgaa
gctcagctggatgactcggggctgtatgaatgtgaagccaccaatgaggtcggcagtgag
aaagctactgtcaacatttccgttgaagcaattccatttgaagtagaaatggatcctcct
caacgcgagctaactgtagagtcagggagtgacctggttttgacctgcagagttgcagac
tgcccttccccacagttcacctggaaacacccgacagaccgtcctcagtacgacaagact
gataccgagggcaatgagtcccgcatctccctctcttcagtgggaacaaaccaggaaaac
atctacagatgtcaggtcaagtgtgggtctgtgataaaggagagctctacgcaaataaaa
gtgtactctttccccagtgatcctgtcattgaatcccatgccccccttcaggaagggaaa
gaagccgctctcacctgcaaagtcgcgggtgtgtatcctccagaatacctggagattcag
tggctggacggggaacgtgttctcaagagagatgaaggaatctacatcaaaaacaacgat
gtgagcaatttaacttcgacttacacctttgtaccgaaaatggaggacagtggaaaagaa
gtaacctgcaaagccattttcaaaatggaaggaatcccagaccagaagaaaagcaaagct
tctgctgtatcacttaatatacacgtttcacccaagaatacctccatttccgtgtacccg
gctgaagcactgaaagaaggagacagcatgactgtttcttgtgcctcccacagtaaccca
gcagcgaccatcactctgcgcaagaagagccccactggagacagagagctggagtccagc
aatggctcattgacaattaatgaagctcagctgggcgactcagggctgtatgaatgtgaa
gccaccaacgagttcggcagtgaaaaagcaagcgttgagatttccgttaaagttcccccg
aggaatacaacagtgttggtctatccatctacagaggtgttagaaggacaaaatatcacc
atttcatgtaaaaccgtcagctaccctgccccgacgatcgtcttgaagaaaatcggcaat
ggaacgactttctgctcagacaacggcacctttgagctttattacttgaccacgaaagac
accggcctttacgagctcaacgtgaccaacgacgtgggccacgaggttgaagtcatcgag
atccacgttggaaaaagacttgaggggaagaagcctcctccttacctggctattttaatc
cctattataggagcctcagcagctgcgttagctgcagcttcagctctctttgttatacgc
ctcttacgtcaagcacagagtcgaggatcctatgcattaacacaattgaatccagctgct
gtctag
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integrated database retrieval system
